Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182679641

Identifier: 182679641

GI number: 182679641

Start: 3106779

End: 3107645

Strand: Reverse

Name: 182679641

Synonym: Bind_2726

Alternate gene names: NA

Gene position: 3107645-3106779 (Counterclockwise)

Preceding gene: 182679642

Following gene: 182679640

Centisome position: 74.52

GC content: 56.63

Gene sequence:

>867_bases
ATGAAGAAAGCCTCTCCAGCTCTGATGGCCGCGATCGATGCCTTGCGCGTGAACCGCGATTCGCAAGCCTTGATCGCGGA
TTGTTTCACCTTCACATTGTCGAACGGTTTGATCCTGACCACCACCAATGCCGATGTTCCGGTCACGCTCAATGGCTATG
TCTATCGCGCCGATTCCATTCTCGTCGATGGCCTCCATTATAAAGCCGTGACCGGCCTTGAGGTGGATCAGCAGCGCATC
ACACTAGCGGCGCGGCCGACGGATACGATCGGCGGTATTCCCATCCTCTCGGCTTTGCGCAATGGCCTGTTCGACGGCTG
TCGTATCAAGCGTGAACGGGCTTTTCTCGCTGCCTGGGGAACCGCGCCGATCGGCAGCGTAATCCTCTTCGTCGGGCGTG
TGGCAACGATCGATCAACTCGGCCGTAGCACGGCGGAAATCACGGTCAATTCCGAATTGGCCCTGCTCGACGTGCAAATG
CCACGCAATCTCTATCAGCCTCATTGCAATCATGTTCTCTATGACGCGGGTTGCGGCCTTGCCAGAAACGCTTTCCGTGC
CGATGGCAGCGTGGAAAGCGGCTCGACCCCCTTTGTAATTCAATGGTCTGCCTCTGAGCCTGCCTATGAACAGGGGCTCG
TGACCTTTACCTCAGGGGTCAATAATGGCGTCACGGCAACGGTGAAATGGGCCAATACAGCCCAGTTTGGCCTGGCTTAT
CCGCTCGATCGTCCACCCTCAATCGGTGATACATTCACGATCTATCAGGGCTGTGACCACACCTTTGCGTCCTGTGGCGC
CAAATTTTCCAATCAGGCCAATTTCCGGGGCTTTCCCTACGTCCCCGCGCCTGTATCCGCCTATTAA

Upstream 100 bases:

>100_bases
TTGCCTATGAATGCCGTTTTCTCGACGATCAGAACGATTTCGAGAATTTCATGGACGGATTATGGACCGTGGCGAGCCTC
AAATTCCGGAGCGTCAAGGC

Downstream 100 bases:

>100_bases
GGAACCGCATGAGCGAAGAAACCGAACGCGCGCTGATCGTCAGCGAGGCGCGTCGCTGGATCGGCACGCCTTATCATCAA
TGCGCCGATGTGCTTGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Bacteriophage Protein; Gene Transfer Agent-Like Protein; Phage Associated Protein; NlpC/P60 Family Phage Cell Wall Peptidase

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI
TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM
PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY
PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY

Sequences:

>Translated_288_residues
MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI
TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM
PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY
PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY
>Mature_288_residues
MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI
TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM
PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY
PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY

Specific function: Unknown

COG id: COG5449

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30891; Mature: 30891

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCEEEEECEE
LVDGLHYKAVTGLEVDQQRITLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWG
EECCEEEEEEECCEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECC
TAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQMPRNLYQPHCNHVLYDAGCGL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHCCCCCCEEEEECCCCH
ARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY
HHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCEEC
PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY
CCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCEEEEECEE
LVDGLHYKAVTGLEVDQQRITLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWG
EECCEEEEEEECCEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECC
TAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQMPRNLYQPHCNHVLYDAGCGL
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHCCCCCCEEEEECCCCH
ARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY
HHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCEEC
PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY
CCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA