| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679641
Identifier: 182679641
GI number: 182679641
Start: 3106779
End: 3107645
Strand: Reverse
Name: 182679641
Synonym: Bind_2726
Alternate gene names: NA
Gene position: 3107645-3106779 (Counterclockwise)
Preceding gene: 182679642
Following gene: 182679640
Centisome position: 74.52
GC content: 56.63
Gene sequence:
>867_bases ATGAAGAAAGCCTCTCCAGCTCTGATGGCCGCGATCGATGCCTTGCGCGTGAACCGCGATTCGCAAGCCTTGATCGCGGA TTGTTTCACCTTCACATTGTCGAACGGTTTGATCCTGACCACCACCAATGCCGATGTTCCGGTCACGCTCAATGGCTATG TCTATCGCGCCGATTCCATTCTCGTCGATGGCCTCCATTATAAAGCCGTGACCGGCCTTGAGGTGGATCAGCAGCGCATC ACACTAGCGGCGCGGCCGACGGATACGATCGGCGGTATTCCCATCCTCTCGGCTTTGCGCAATGGCCTGTTCGACGGCTG TCGTATCAAGCGTGAACGGGCTTTTCTCGCTGCCTGGGGAACCGCGCCGATCGGCAGCGTAATCCTCTTCGTCGGGCGTG TGGCAACGATCGATCAACTCGGCCGTAGCACGGCGGAAATCACGGTCAATTCCGAATTGGCCCTGCTCGACGTGCAAATG CCACGCAATCTCTATCAGCCTCATTGCAATCATGTTCTCTATGACGCGGGTTGCGGCCTTGCCAGAAACGCTTTCCGTGC CGATGGCAGCGTGGAAAGCGGCTCGACCCCCTTTGTAATTCAATGGTCTGCCTCTGAGCCTGCCTATGAACAGGGGCTCG TGACCTTTACCTCAGGGGTCAATAATGGCGTCACGGCAACGGTGAAATGGGCCAATACAGCCCAGTTTGGCCTGGCTTAT CCGCTCGATCGTCCACCCTCAATCGGTGATACATTCACGATCTATCAGGGCTGTGACCACACCTTTGCGTCCTGTGGCGC CAAATTTTCCAATCAGGCCAATTTCCGGGGCTTTCCCTACGTCCCCGCGCCTGTATCCGCCTATTAA
Upstream 100 bases:
>100_bases TTGCCTATGAATGCCGTTTTCTCGACGATCAGAACGATTTCGAGAATTTCATGGACGGATTATGGACCGTGGCGAGCCTC AAATTCCGGAGCGTCAAGGC
Downstream 100 bases:
>100_bases GGAACCGCATGAGCGAAGAAACCGAACGCGCGCTGATCGTCAGCGAGGCGCGTCGCTGGATCGGCACGCCTTATCATCAA TGCGCCGATGTGCTTGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Bacteriophage Protein; Gene Transfer Agent-Like Protein; Phage Associated Protein; NlpC/P60 Family Phage Cell Wall Peptidase
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY
Sequences:
>Translated_288_residues MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY >Mature_288_residues MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSILVDGLHYKAVTGLEVDQQRI TLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWGTAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQM PRNLYQPHCNHVLYDAGCGLARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY
Specific function: Unknown
COG id: COG5449
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30891; Mature: 30891
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCEEEEECEE LVDGLHYKAVTGLEVDQQRITLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWG EECCEEEEEEECCEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECC TAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQMPRNLYQPHCNHVLYDAGCGL CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHCCCCCCEEEEECCCCH ARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY HHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCEEC PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY CCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKASPALMAAIDALRVNRDSQALIADCFTFTLSNGLILTTTNADVPVTLNGYVYRADSI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCEEEEECEE LVDGLHYKAVTGLEVDQQRITLAARPTDTIGGIPILSALRNGLFDGCRIKRERAFLAAWG EECCEEEEEEECCEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCEEEEEECC TAPIGSVILFVGRVATIDQLGRSTAEITVNSELALLDVQMPRNLYQPHCNHVLYDAGCGL CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCHHHCCCCCCEEEEECCCCH ARNAFRADGSVESGSTPFVIQWSASEPAYEQGLVTFTSGVNNGVTATVKWANTAQFGLAY HHHHHCCCCCCCCCCCCEEEEECCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCEEC PLDRPPSIGDTFTIYQGCDHTFASCGAKFSNQANFRGFPYVPAPVSAY CCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA