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The map label for this gene is oxyR [H]

Identifier: 182679384

GI number: 182679384

Start: 2775084

End: 2776046

Strand: Reverse

Name: oxyR [H]

Synonym: Bind_2432

Alternate gene names: 182679384

Gene position: 2776046-2775084 (Counterclockwise)

Preceding gene: 182679388

Following gene: 182679381

Centisome position: 66.57

GC content: 58.26

Gene sequence:

>963_bases
TTGGCTTTACCGATTGTTTATCGAGAAATCATAGACTATCTCTATTTCATGAACCTTCGCGATCTCCAATATATTATTGC
CGTCGCCAATTTCGGTCATTTCGGCCGCGCCGCCCAGGCCTGCCATATTAGCCAGCCGACGTTGAGCGGGCAGATCCTGA
AACTGGAAGACGAACTCGGCGTCCGCATTTTCGAACGCGTCGGCAAAAGCGTTTGCACGACAGCGGCGGGCGAGGAAATC
CTGGTCCATGCCCGGCGCGCGGTCGCGGCCTCCGAGGATCTTCTGCGTTGTGCGCGGGCAAGCCGCGATCCGATGGCGGG
CGCCTTGCGGCTAGGTGTCATTCCGACTCTTGGTCCCTATCTTATGCCGTTCGTTTTGCCGCGTGCGCGCCGGCAATTGC
CAGCCACGCCCTTGATGCTTGTCGAGGATTTTACGGATCGGCTGATCGAGCCGGTCCTATCCGGCAAGCTCGACGCGGCT
ATTATCGCCTCCGATCCGGAAAAGCCGGTGTTGACCTCCGAACTTTTGTTCGAGGAACCCTTCTTTCTGATCGTCCCGCG
TGATCATGCTTTGGCGGAGCGTGAATCTGTGGCAGCAGGTGAGATTGATCCGCAATCCCTCTTGCTCCTCGCTGATGGCC
ATTGTCTGCGTGATCAGGCGATCGAATTGTGCCGTCAGGCGCAGCCTGATGATTCCCTCGCCGATATGCGGGCGACGAGC
CTGCCGACCCTCCTGCATATGGCGGCGGCTGGCTATGGGATTACCTTGATGCCGGCCTTGGCTTTGCTTGATAAACACAG
CCTGCCGCATTCACTCATCGCCAAGCCTTTGACCGGACCGCATACAGCGCGTAGTGTACGGCTCGTCTCGCGTTCAAGCA
ATCCCCGCCGCAAGGCGATCGATGCTCTGGCCAAGCTGATCAAGACGAGCTTGCCGCCCGAAATCCCGCAATTATCAGCG
TGA

Upstream 100 bases:

>100_bases
CCACAAAGGGCGGACATCTGTCCGCTTATAGACAGAGAGATTTTTGTGGGCAAGGCGGAGACAGCGCTTAAATTTATGGA
CATCCTGGAAAATATATAAA

Downstream 100 bases:

>100_bases
ACCGAACCAAAAGAAAAGCGCGGCGAATGAAATCGCCGCGCTTTTTCTCTCTACAGACAATATGCTTCAGGAATTAGCTG
GCGGCAGACACCGGCAGGCT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MALPIVYREIIDYLYFMNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELGVRIFERVGKSVCTTAAGEEI
LVHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPYLMPFVLPRARRQLPATPLMLVEDFTDRLIEPVLSGKLDAA
IIASDPEKPVLTSELLFEEPFFLIVPRDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATS
LPTLLHMAAAGYGITLMPALALLDKHSLPHSLIAKPLTGPHTARSVRLVSRSSNPRRKAIDALAKLIKTSLPPEIPQLSA

Sequences:

>Translated_320_residues
MALPIVYREIIDYLYFMNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELGVRIFERVGKSVCTTAAGEEI
LVHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPYLMPFVLPRARRQLPATPLMLVEDFTDRLIEPVLSGKLDAA
IIASDPEKPVLTSELLFEEPFFLIVPRDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATS
LPTLLHMAAAGYGITLMPALALLDKHSLPHSLIAKPLTGPHTARSVRLVSRSSNPRRKAIDALAKLIKTSLPPEIPQLSA
>Mature_319_residues
ALPIVYREIIDYLYFMNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELGVRIFERVGKSVCTTAAGEEIL
VHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPYLMPFVLPRARRQLPATPLMLVEDFTDRLIEPVLSGKLDAAI
IASDPEKPVLTSELLFEEPFFLIVPRDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATSL
PTLLHMAAAGYGITLMPALALLDKHSLPHSLIAKPLTGPHTARSVRLVSRSSNPRRKAIDALAKLIKTSLPPEIPQLSA

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=295, Percent_Identity=42.0338983050847, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1787879, Length=249, Percent_Identity=31.3253012048193, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI157672245, Length=284, Percent_Identity=30.6338028169014, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI145693105, Length=277, Percent_Identity=27.4368231046931, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1788887, Length=245, Percent_Identity=31.0204081632653, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788748, Length=298, Percent_Identity=29.1946308724832, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI2367136, Length=250, Percent_Identity=30.4, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788297, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081904, Length=181, Percent_Identity=32.0441988950276, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790208, Length=247, Percent_Identity=26.3157894736842, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787530, Length=209, Percent_Identity=27.7511961722488, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082132, Length=246, Percent_Identity=24.7967479674797, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787601, Length=181, Percent_Identity=28.1767955801105, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787806, Length=281, Percent_Identity=24.9110320284698, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788481, Length=302, Percent_Identity=23.841059602649, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34960; Mature: 34829

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPIVYREIIDYLYFMNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELG
CCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEECHHHH
VRIFERVGKSVCTTAAGEEILVHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHH
LMPFVLPRARRQLPATPLMLVEDFTDRLIEPVLSGKLDAAIIASDPEKPVLTSELLFEEP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCC
FFLIVPRDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATS
EEEEEECCHHHHHHHHCCCCCCCHHHEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LPTLLHMAAAGYGITLMPALALLDKHSLPHSLIAKPLTGPHTARSVRLVSRSSNPRRKAI
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHEECCCCCCHHHHH
DALAKLIKTSLPPEIPQLSA
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ALPIVYREIIDYLYFMNLRDLQYIIAVANFGHFGRAAQACHISQPTLSGQILKLEDELG
CCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEEEECHHHH
VRIFERVGKSVCTTAAGEEILVHARRAVAASEDLLRCARASRDPMAGALRLGVIPTLGPY
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHH
LMPFVLPRARRQLPATPLMLVEDFTDRLIEPVLSGKLDAAIIASDPEKPVLTSELLFEEP
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCC
FFLIVPRDHALAERESVAAGEIDPQSLLLLADGHCLRDQAIELCRQAQPDDSLADMRATS
EEEEEECCHHHHHHHHCCCCCCCHHHEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHH
LPTLLHMAAAGYGITLMPALALLDKHSLPHSLIAKPLTGPHTARSVRLVSRSSNPRRKAI
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHEECCCCCCHHHHH
DALAKLIKTSLPPEIPQLSA
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA