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The map label for this gene is 182679366

Identifier: 182679366

GI number: 182679366

Start: 2756047

End: 2756436

Strand: Reverse

Name: 182679366

Synonym: Bind_2413

Alternate gene names: NA

Gene position: 2756436-2756047 (Counterclockwise)

Preceding gene: 182679367

Following gene: 182679356

Centisome position: 66.1

GC content: 55.38

Gene sequence:

>390_bases
ATGCGCGCGCCACAAATCATTAGGACGGCAGCCGGAGAGGAATTGGTCGTCATTCCCAAGAGTGATTATGACGAACTCAT
CGCGGCCTATTCAGAGGCTGAAGAGGATGCTGCTGATCTCGCTATATATGATGCCCGCAAGAAGGAACTCGAGGAAGGAT
CTAATGCGGCTCTCCCGGCGGAGGTCAGCGCCAGCCTTTTGCGCGGCGACAGCCTATTGAAGGCGTTTCGCAAGTGGCGC
GGTATGACGCAAATCGATCTGGCGAAAGCCGCGGGTCTCGGACAAGGATACCTCTCTGATTTAGAGAGCCGACGCAGAGG
TGGCACGCCAGAAACGCTTGCTTCGCTTGCCACAGCTTTGGATATTGATCCGGCATGGCTGGTTGAATAA

Upstream 100 bases:

>100_bases
CGTATTGGCCGCTATCGGGTGATTTTTGACGAAGATAAAGTCACCATTCTCGCGCTTTATATTGGTAAGCGTGAAACAAC
AACCTATCGGAATAACTGAA

Downstream 100 bases:

>100_bases
TGCCATCGAGTTATTTACCAAAATCTCTCGCATCACCTGCCGCGATCCAAAGGGTTGAGCGGAAACTCGCCAAAAGCATC
GCCAAAGATTCCGATTTATC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRAPQIIRTAAGEELVVIPKSDYDELIAAYSEAEEDAADLAIYDARKKELEEGSNAALPAEVSASLLRGDSLLKAFRKWR
GMTQIDLAKAAGLGQGYLSDLESRRRGGTPETLASLATALDIDPAWLVE

Sequences:

>Translated_129_residues
MRAPQIIRTAAGEELVVIPKSDYDELIAAYSEAEEDAADLAIYDARKKELEEGSNAALPAEVSASLLRGDSLLKAFRKWR
GMTQIDLAKAAGLGQGYLSDLESRRRGGTPETLASLATALDIDPAWLVE
>Mature_129_residues
MRAPQIIRTAAGEELVVIPKSDYDELIAAYSEAEEDAADLAIYDARKKELEEGSNAALPAEVSASLLRGDSLLKAFRKWR
GMTQIDLAKAAGLGQGYLSDLESRRRGGTPETLASLATALDIDPAWLVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13920; Mature: 13920

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPQIIRTAAGEELVVIPKSDYDELIAAYSEAEEDAADLAIYDARKKELEEGSNAALPA
CCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EVSASLLRGDSLLKAFRKWRGMTQIDLAKAAGLGQGYLSDLESRRRGGTPETLASLATAL
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DIDPAWLVE
CCCCHHCCC
>Mature Secondary Structure
MRAPQIIRTAAGEELVVIPKSDYDELIAAYSEAEEDAADLAIYDARKKELEEGSNAALPA
CCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EVSASLLRGDSLLKAFRKWRGMTQIDLAKAAGLGQGYLSDLESRRRGGTPETLASLATAL
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
DIDPAWLVE
CCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA