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The map label for this gene is dedA [C]

Identifier: 182679216

GI number: 182679216

Start: 2591326

End: 2592000

Strand: Reverse

Name: dedA [C]

Synonym: Bind_2256

Alternate gene names: 182679216

Gene position: 2592000-2591326 (Counterclockwise)

Preceding gene: 182679217

Following gene: 182679215

Centisome position: 62.16

GC content: 56.59

Gene sequence:

>675_bases
ATGTCATTGACCACGGCGATCCCAGCCGTCATTTCCCATTACGGCTATTGGGCAGTTTTCGGCATGGTGGCGATGGAAAG
CCTTGGTGTTCCGCTGCCTGGCGAAACGGTTCTGATTTCGGCGGCGATTGCGAGCGCGGCGCTGCACGATATGAATATCG
TTCTCGTCATTGCCGCCGCCGTGGTCGGCGCGTCCCTTGGTGACAATATCGGCTATTGGGTCGGCCGCAATTACGGCGCG
CAGCTTCTTGCCAAACACGGCCAGAAAATCGGGCTTGGTGAACGCCAACTCAAACTCGGCCATTTTCTCTTTCAGAAACA
CGGCGCCAAAATCGTTTTCTTCGGACGATTCGTCGCTTTTCTACGAACTTTCGCGGCCCTTTTGGCAGGAGCCAATCATT
ACGATGCCCGGCGTTTCATGGTTTTCAACGTCATGGGCGCGATTTTATGGGCCACGACTGTGGGCCTGCTTGGCTATGGT
TTCGGTGCTGCGGCCGAACGGCTCGCAAAACCCTTCAGCCTGACTTTGGCGGTCTTGAGCGTGGCGACGCTGATTTGGCT
CTGGCCGATCTATAAGCGACGGGAAAGCGCTTTGATGCAGGAAGCGGAAGCCATGGCGGCACGGGAAGAACAAGCTCAAG
AGGAGCAAGGCTCAGGCAAGCCCAAAGCGTCATGA

Upstream 100 bases:

>100_bases
CGTGGCGGATTTGCTATAGCCGCACGCCATAAGCGGTTTCGGCACTGGTTGAGTGGTCAAACCTTCCAGCACGCCTCTGC
TCGCGAGGTCTACTCCCATC

Downstream 100 bases:

>100_bases
AGTGAGAGCGTCGGGAGCGAGATCAATTTCGGAATCGATCCGATGTTTTCTTAATCGTTTCCGCGAAGTCTATTCTCTTT
TTTAAGATAAGATCTTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSLTTAIPAVISHYGYWAVFGMVAMESLGVPLPGETVLISAAIASAALHDMNIVLVIAAAVVGASLGDNIGYWVGRNYGA
QLLAKHGQKIGLGERQLKLGHFLFQKHGAKIVFFGRFVAFLRTFAALLAGANHYDARRFMVFNVMGAILWATTVGLLGYG
FGAAAERLAKPFSLTLAVLSVATLIWLWPIYKRRESALMQEAEAMAAREEQAQEEQGSGKPKAS

Sequences:

>Translated_224_residues
MSLTTAIPAVISHYGYWAVFGMVAMESLGVPLPGETVLISAAIASAALHDMNIVLVIAAAVVGASLGDNIGYWVGRNYGA
QLLAKHGQKIGLGERQLKLGHFLFQKHGAKIVFFGRFVAFLRTFAALLAGANHYDARRFMVFNVMGAILWATTVGLLGYG
FGAAAERLAKPFSLTLAVLSVATLIWLWPIYKRRESALMQEAEAMAAREEQAQEEQGSGKPKAS
>Mature_223_residues
SLTTAIPAVISHYGYWAVFGMVAMESLGVPLPGETVLISAAIASAALHDMNIVLVIAAAVVGASLGDNIGYWVGRNYGAQ
LLAKHGQKIGLGERQLKLGHFLFQKHGAKIVFFGRFVAFLRTFAALLAGANHYDARRFMVFNVMGAILWATTVGLLGYGF
GAAAERLAKPFSLTLAVLSVATLIWLWPIYKRRESALMQEAEAMAAREEQAQEEQGSGKPKAS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=161, Percent_Identity=32.2981366459627, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789481, Length=170, Percent_Identity=31.7647058823529, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1789384, Length=165, Percent_Identity=31.5151515151515, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87082056, Length=168, Percent_Identity=32.7380952380952, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24083; Mature: 23952

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTTAIPAVISHYGYWAVFGMVAMESLGVPLPGETVLISAAIASAALHDMNIVLVIAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVGASLGDNIGYWVGRNYGAQLLAKHGQKIGLGERQLKLGHFLFQKHGAKIVFFGRFVAF
HHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LRTFAALLAGANHYDARRFMVFNVMGAILWATTVGLLGYGFGAAAERLAKPFSLTLAVLS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
VATLIWLWPIYKRRESALMQEAEAMAAREEQAQEEQGSGKPKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLTTAIPAVISHYGYWAVFGMVAMESLGVPLPGETVLISAAIASAALHDMNIVLVIAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VVGASLGDNIGYWVGRNYGAQLLAKHGQKIGLGERQLKLGHFLFQKHGAKIVFFGRFVAF
HHHHHHCCCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LRTFAALLAGANHYDARRFMVFNVMGAILWATTVGLLGYGFGAAAERLAKPFSLTLAVLS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
VATLIWLWPIYKRRESALMQEAEAMAAREEQAQEEQGSGKPKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]