| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is atsA [H]
Identifier: 182679168
GI number: 182679168
Start: 2529247
End: 2531775
Strand: Direct
Name: atsA [H]
Synonym: Bind_2206
Alternate gene names: 182679168
Gene position: 2529247-2531775 (Clockwise)
Preceding gene: 182679166
Following gene: 182679169
Centisome position: 60.65
GC content: 52.95
Gene sequence:
>2529_bases ATGCGCGGAGTGACACGGAGCAAAGTGCGAACGAGCCTATCAGCGATCTTTCTTACGCTGACGCTCATATCGGTGGTGCC TGCGGCCGCTCAACAGCGAGAAGGCGTACCCGGCTCCCCAAGTGCAACAACGACGATCGATGGGCGATATTTGCCACCCC CTCCACCGCCATTTGGCGGTGAAATTAATTTAAACGCCGTGCAATCAAAACCTTATTGGCCAGCGCGCGTTGTGCCCCCG AAGGGAGCCCCGAATGTCTTGCTGATTATGACCGATGACGTCGGTTTTGGCGCTCCGAGCACTTTTGGAGGGGTCATTCC CACTCCGGCTCTCGACCGCATTGCCAATGCTGGCTTGCGTTATACGCAATTTCACTCGACAGCCCTCTGCTCACCAACAC GCGCCGCGCTTATTACCGGGCGCAACCATCATTCGGTGGGTTTCGGCCAAATTTCAGAAATGTCCACAGGTTTCCCCGGT TATGACAGTATCATCACCAGAGATACAGCGACGATCGGTCGAATTCTGAAAGACAATGGCTACGCGACCTCGTGGTTCGG CAAGAACCATAACACTCCAGCCTTTCAGGCGAGCCAAGCGGGACCTTTCGAGCAATGGCCCATCGGTATGGGCTTTGAAT ATTTCTACGGGTTTGTTGGTGGTGATACCAGCCAGTGGCAGCCAAATCTGTTCCGCCAAACCACGGCAATCTATCCCTAT ATCGGTCATCCCGACTGGAACCTGACCACGGCCATGGCCGATGATGCCATCGCTCATATCAAAATGCTGAACGAAGTCGA TCCCACTAAACCATTCTTTGTTAATTATACCCCCGGGGGCACCCACGCACCACACCACCCGACGCCCGAATGGATCAAAA AGATCAGTGACATGCATCTATTCGACAAGGGCTGGAACACACTCCGCGAGACGATTTTCTCTAACCAAAAGCGGCTCAAT GTTATCCCACAAGATGCCAAGCTTACGCCCTGGCCTGATGATTTGCTGAAGCAATGGGATACACTTACAGAGGACGAGAA AAAGCTGTTCATTCGTCAAGCCGACGTCTACGCCGCTTATCTTACCTATACCGACCATGAGATCGGCCGGGTGATTCAAG CGGTCGAGGATACCGGCAAGCTCGACAATACATTGATTATTTACATCAGCGGCGACAATGGTTCCAGTGCGGAGGGATCA CCCAATGGCACACCTAATGAAGTCGCGCAATTCAACAGCGTCGAGGTGCCGGTAGCAGAACAGCTAAAGTATTTCTACGA CGTCTGGGGTTCGGACAAAACTTATAATCACATGGCAGTGGGTTGGACCTGGGCTTTCGACACGCCCTATAAATGGACGA AACAAGTGGCATCGCATTTCGGCGGCACACGGCAAGGCATGGCCATCAGTTGGCCGGGCCACATTAAAGATGTCGGAGGC ATCCGTAATCAGTTTCATCACGTCATCGATATTGTCCCGACCGTTTTGGAAGCAGCGAATATCTCGCCTCCGGTGATGGT CGATGGCATCGCCCAAAATCCGATCGAAGGCGTGAGCTTAGCCTATACTTTCGATAAAGCGAACGCCGACACCCCCACCA AGCATCACACCCAATATTTCGAGATGTTCGGTAATCGCGGCATCTATCACGATGGCTGGTACGCCAATACACAACCGATC AGCCCGCCGTGGAAACTCGGCGCCACACCAAACCCAAACGTCATAAACAGCTATAAATGGGAGCTTTACGATCTCACCAA GGATTGGACGCAGAACGAAGATCTCGCCGCCGCCAATCCCGCCAAGCTGAAAGAGATGCAGGATCTTTTCCTGGTCGAAG CCGCCAAATATCAGGTCTTCCCGCTCGACAATTCACTCGCTTCACGAATGGTCGTGCCGAGGCCCAGCGTTACGGCCGGA AGAACTGAATTCACTTATACAGGCGAATTGACCGGCGTCCCGATGGGCGATGCTCCAAGTTTGATTGCGGCTTCCTATAC GATCACAGCAGAGATCGATGTCCCTGAAGGTGGCGCCGAGGGAATACTCGCGACCCAAGGAGGACGCTTCGGCGGATGGG GGTTCTATCTTGTGAAAGGCAAACCCGTCTTTACCTGGAACCTGCTCGATCTCAAACGCGTTCGTTGGGAAAATCCGGAA GCCCTTTTACCAGGAAAACATGCTCTGGTCTTCGACTTCAAATATGACGGCCTCGGTTTTGGGACGTTGGCCTTCAACAA TGTGAGCGGCCTTGGCCAGGGGGGCACGGGCACGCTCCGGGTCGATGGGAAAATCGTGGCCACACAAACGATGGAACGAA CGATTCCGGTTATTCTTCAATGGGATGAGACCTTTGACATTGGGGCCGATACCGGTACGCCTGTTGATGATAATGACTAT CAAGTACCGTTCGGATTTACTGGTAAACTCAACAAACTGACGATCAAGATCGATCGACCGAAATTATCGCCAGAAGACGA GAAACGTCTCATGCAAGAAGGACAACGCAGCAATCGCATGAGCGAATAG
Upstream 100 bases:
>100_bases TGCGCTCCCTATGTTCCGTGTTAGTCTGATTACACACTGCCGCTATTGATCAGCATCAATGATCCGAAGCACCTGAATGA TGACCCTCAGGAGTGAACAT
Downstream 100 bases:
>100_bases TTTACACTCAAGCAATGTCTAGTCAGCATTCAGAACGAGGAGACAAATATGACGAAGAGCGTGCAAAAACTCGCCGGCAT GGCACTGGGAGCAGTCCTGA
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 842; Mature: 842
Protein sequence:
>842_residues MRGVTRSKVRTSLSAIFLTLTLISVVPAAAQQREGVPGSPSATTTIDGRYLPPPPPPFGGEINLNAVQSKPYWPARVVPP KGAPNVLLIMTDDVGFGAPSTFGGVIPTPALDRIANAGLRYTQFHSTALCSPTRAALITGRNHHSVGFGQISEMSTGFPG YDSIITRDTATIGRILKDNGYATSWFGKNHNTPAFQASQAGPFEQWPIGMGFEYFYGFVGGDTSQWQPNLFRQTTAIYPY IGHPDWNLTTAMADDAIAHIKMLNEVDPTKPFFVNYTPGGTHAPHHPTPEWIKKISDMHLFDKGWNTLRETIFSNQKRLN VIPQDAKLTPWPDDLLKQWDTLTEDEKKLFIRQADVYAAYLTYTDHEIGRVIQAVEDTGKLDNTLIIYISGDNGSSAEGS PNGTPNEVAQFNSVEVPVAEQLKYFYDVWGSDKTYNHMAVGWTWAFDTPYKWTKQVASHFGGTRQGMAISWPGHIKDVGG IRNQFHHVIDIVPTVLEAANISPPVMVDGIAQNPIEGVSLAYTFDKANADTPTKHHTQYFEMFGNRGIYHDGWYANTQPI SPPWKLGATPNPNVINSYKWELYDLTKDWTQNEDLAAANPAKLKEMQDLFLVEAAKYQVFPLDNSLASRMVVPRPSVTAG RTEFTYTGELTGVPMGDAPSLIAASYTITAEIDVPEGGAEGILATQGGRFGGWGFYLVKGKPVFTWNLLDLKRVRWENPE ALLPGKHALVFDFKYDGLGFGTLAFNNVSGLGQGGTGTLRVDGKIVATQTMERTIPVILQWDETFDIGADTGTPVDDNDY QVPFGFTGKLNKLTIKIDRPKLSPEDEKRLMQEGQRSNRMSE
Sequences:
>Translated_842_residues MRGVTRSKVRTSLSAIFLTLTLISVVPAAAQQREGVPGSPSATTTIDGRYLPPPPPPFGGEINLNAVQSKPYWPARVVPP KGAPNVLLIMTDDVGFGAPSTFGGVIPTPALDRIANAGLRYTQFHSTALCSPTRAALITGRNHHSVGFGQISEMSTGFPG YDSIITRDTATIGRILKDNGYATSWFGKNHNTPAFQASQAGPFEQWPIGMGFEYFYGFVGGDTSQWQPNLFRQTTAIYPY IGHPDWNLTTAMADDAIAHIKMLNEVDPTKPFFVNYTPGGTHAPHHPTPEWIKKISDMHLFDKGWNTLRETIFSNQKRLN VIPQDAKLTPWPDDLLKQWDTLTEDEKKLFIRQADVYAAYLTYTDHEIGRVIQAVEDTGKLDNTLIIYISGDNGSSAEGS PNGTPNEVAQFNSVEVPVAEQLKYFYDVWGSDKTYNHMAVGWTWAFDTPYKWTKQVASHFGGTRQGMAISWPGHIKDVGG IRNQFHHVIDIVPTVLEAANISPPVMVDGIAQNPIEGVSLAYTFDKANADTPTKHHTQYFEMFGNRGIYHDGWYANTQPI SPPWKLGATPNPNVINSYKWELYDLTKDWTQNEDLAAANPAKLKEMQDLFLVEAAKYQVFPLDNSLASRMVVPRPSVTAG RTEFTYTGELTGVPMGDAPSLIAASYTITAEIDVPEGGAEGILATQGGRFGGWGFYLVKGKPVFTWNLLDLKRVRWENPE ALLPGKHALVFDFKYDGLGFGTLAFNNVSGLGQGGTGTLRVDGKIVATQTMERTIPVILQWDETFDIGADTGTPVDDNDY QVPFGFTGKLNKLTIKIDRPKLSPEDEKRLMQEGQRSNRMSE >Mature_842_residues MRGVTRSKVRTSLSAIFLTLTLISVVPAAAQQREGVPGSPSATTTIDGRYLPPPPPPFGGEINLNAVQSKPYWPARVVPP KGAPNVLLIMTDDVGFGAPSTFGGVIPTPALDRIANAGLRYTQFHSTALCSPTRAALITGRNHHSVGFGQISEMSTGFPG YDSIITRDTATIGRILKDNGYATSWFGKNHNTPAFQASQAGPFEQWPIGMGFEYFYGFVGGDTSQWQPNLFRQTTAIYPY IGHPDWNLTTAMADDAIAHIKMLNEVDPTKPFFVNYTPGGTHAPHHPTPEWIKKISDMHLFDKGWNTLRETIFSNQKRLN VIPQDAKLTPWPDDLLKQWDTLTEDEKKLFIRQADVYAAYLTYTDHEIGRVIQAVEDTGKLDNTLIIYISGDNGSSAEGS PNGTPNEVAQFNSVEVPVAEQLKYFYDVWGSDKTYNHMAVGWTWAFDTPYKWTKQVASHFGGTRQGMAISWPGHIKDVGG IRNQFHHVIDIVPTVLEAANISPPVMVDGIAQNPIEGVSLAYTFDKANADTPTKHHTQYFEMFGNRGIYHDGWYANTQPI SPPWKLGATPNPNVINSYKWELYDLTKDWTQNEDLAAANPAKLKEMQDLFLVEAAKYQVFPLDNSLASRMVVPRPSVTAG RTEFTYTGELTGVPMGDAPSLIAASYTITAEIDVPEGGAEGILATQGGRFGGWGFYLVKGKPVFTWNLLDLKRVRWENPE ALLPGKHALVFDFKYDGLGFGTLAFNNVSGLGQGGTGTLRVDGKIVATQTMERTIPVILQWDETFDIGADTGTPVDDNDY QVPFGFTGKLNKLTIKIDRPKLSPEDEKRLMQEGQRSNRMSE
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI53831991, Length=150, Percent_Identity=36, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI157266309, Length=152, Percent_Identity=35.5263157894737, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI71852586, Length=157, Percent_Identity=35.6687898089172, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI71852584, Length=360, Percent_Identity=27.2222222222222, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI58743319, Length=175, Percent_Identity=31.4285714285714, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI31742482, Length=140, Percent_Identity=33.5714285714286, Blast_Score=74, Evalue=6e-13, Organism=Homo sapiens, GI109389362, Length=330, Percent_Identity=23.030303030303, Blast_Score=73, Evalue=1e-12, Organism=Homo sapiens, GI4503899, Length=227, Percent_Identity=29.5154185022026, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1790233, Length=326, Percent_Identity=26.6871165644172, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI281366397, Length=452, Percent_Identity=20.1327433628319, Blast_Score=73, Evalue=7e-13, Organism=Drosophila melanogaster, GI281366395, Length=452, Percent_Identity=20.1327433628319, Blast_Score=73, Evalue=7e-13, Organism=Drosophila melanogaster, GI24666163, Length=452, Percent_Identity=20.1327433628319, Blast_Score=73, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 92966; Mature: 92966
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVTRSKVRTSLSAIFLTLTLISVVPAAAQQREGVPGSPSATTTIDGRYLPPPPPPFGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCCCC EINLNAVQSKPYWPARVVPPKGAPNVLLIMTDDVGFGAPSTFGGVIPTPALDRIANAGLR EEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCE YTQFHSTALCSPTRAALITGRNHHSVGFGQISEMSTGFPGYDSIITRDTATIGRILKDNG EEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCHHEECCHHHHHHHHHCCC YATSWFGKNHNTPAFQASQAGPFEQWPIGMGFEYFYGFVGGDTSQWQPNLFRQTTAIYPY CEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHEEEEE IGHPDWNLTTAMADDAIAHIKMLNEVDPTKPFFVNYTPGGTHAPHHPTPEWIKKISDMHL CCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH FDKGWNTLRETIFSNQKRLNVIPQDAKLTPWPDDLLKQWDTLTEDEKKLFIRQADVYAAY HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCEEEEE LTYTDHEIGRVIQAVEDTGKLDNTLIIYISGDNGSSAEGSPNGTPNEVAQFNSVEVPVAE EEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHH QLKYFYDVWGSDKTYNHMAVGWTWAFDTPYKWTKQVASHFGGTRQGMAISWPGHIKDVGG HHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHH IRNQFHHVIDIVPTVLEAANISPPVMVDGIAQNPIEGVSLAYTFDKANADTPTKHHTQYF HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH EMFGNRGIYHDGWYANTQPISPPWKLGATPNPNVINSYKWELYDLTKDWTQNEDLAAANP HHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC AKLKEMQDLFLVEAAKYQVFPLDNSLASRMVVPRPSVTAGRTEFTYTGELTGVPMGDAPS HHHHHHHHHHHEEECCEEEEECCCHHHHCEECCCCCCCCCCEEEEEECEEECCCCCCCCC LIAASYTITAEIDVPEGGAEGILATQGGRFGGWGFYLVKGKPVFTWNLLDLKRVRWENPE EEEEEEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCEEEEEEHHHHHHHCCCCCC ALLPGKHALVFDFKYDGLGFGTLAFNNVSGLGQGGTGTLRVDGKIVATQTMERTIPVILQ EECCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCEEEEECHHCCCCCEEEE WDETFDIGADTGTPVDDNDYQVPFGFTGKLNKLTIKIDRPKLSPEDEKRLMQEGQRSNRM ECCCEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC SE CC >Mature Secondary Structure MRGVTRSKVRTSLSAIFLTLTLISVVPAAAQQREGVPGSPSATTTIDGRYLPPPPPPFGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCCCC EINLNAVQSKPYWPARVVPPKGAPNVLLIMTDDVGFGAPSTFGGVIPTPALDRIANAGLR EEEEEEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCE YTQFHSTALCSPTRAALITGRNHHSVGFGQISEMSTGFPGYDSIITRDTATIGRILKDNG EEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCHHEECCHHHHHHHHHCCC YATSWFGKNHNTPAFQASQAGPFEQWPIGMGFEYFYGFVGGDTSQWQPNLFRQTTAIYPY CEEEECCCCCCCCCEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCHHHHHHHEEEEE IGHPDWNLTTAMADDAIAHIKMLNEVDPTKPFFVNYTPGGTHAPHHPTPEWIKKISDMHL CCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH FDKGWNTLRETIFSNQKRLNVIPQDAKLTPWPDDLLKQWDTLTEDEKKLFIRQADVYAAY HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCHHEEEEECCEEEEE LTYTDHEIGRVIQAVEDTGKLDNTLIIYISGDNGSSAEGSPNGTPNEVAQFNSVEVPVAE EEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHH QLKYFYDVWGSDKTYNHMAVGWTWAFDTPYKWTKQVASHFGGTRQGMAISWPGHIKDVGG HHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHH IRNQFHHVIDIVPTVLEAANISPPVMVDGIAQNPIEGVSLAYTFDKANADTPTKHHTQYF HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH EMFGNRGIYHDGWYANTQPISPPWKLGATPNPNVINSYKWELYDLTKDWTQNEDLAAANP HHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC AKLKEMQDLFLVEAAKYQVFPLDNSLASRMVVPRPSVTAGRTEFTYTGELTGVPMGDAPS HHHHHHHHHHHEEECCEEEEECCCHHHHCEECCCCCCCCCCEEEEEECEEECCCCCCCCC LIAASYTITAEIDVPEGGAEGILATQGGRFGGWGFYLVKGKPVFTWNLLDLKRVRWENPE EEEEEEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCEEEEEEHHHHHHHCCCCCC ALLPGKHALVFDFKYDGLGFGTLAFNNVSGLGQGGTGTLRVDGKIVATQTMERTIPVILQ EECCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCEEEEECHHCCCCCEEEE WDETFDIGADTGTPVDDNDYQVPFGFTGKLNKLTIKIDRPKLSPEDEKRLMQEGQRSNRM ECCCEECCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]