| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679133
Identifier: 182679133
GI number: 182679133
Start: 2476248
End: 2478278
Strand: Direct
Name: 182679133
Synonym: Bind_2170
Alternate gene names: NA
Gene position: 2476248-2478278 (Clockwise)
Preceding gene: 182679132
Following gene: 182679134
Centisome position: 59.38
GC content: 52.98
Gene sequence:
>2031_bases TTGACACTGCGCCTCAGACATCTGCGGATGCGTGCCACGACATCGGGAGGCCTATACGGTGCTGACATTAGTTTCGGTCC GGGGCTGACTGTTATCTGGGCCGATAACACCAAGGGTAAGTCAACTTGCATGCAAGGCATGCTGTATGCGCTTGGAATGG AGCGCATGCTAAGTCCTCGGCGCGAGGTCCCACTGCCTCATGCGATGACCAGCTTTGTTGAGACCGATGGCAAAGAGCGG CATGCAGTTCTAGAATCCAATGTGTCGCTTGAGATAGAGAACGGCGCGGGACGGATCATTACGGTCCACCGTTCGATCAA GTCCTTGCTCGATAATCGGCTCATTCGGGTCGATTTCGGGCCGACGCTGACAGACGAGACCACGAGGGCACAGCGTAAAG ATTTCTTTGTCATTGATCCAGGTGCAGCCCTGAGAGAGAATGGCTTCCACTATTTTCTAGAGGATTTCCTCGGCTGGGAA CTTCCGACGGTCAGGCGCTACGACGCACCAGATGGGAAACTCTATCTTGAGACGATTTTCCCGCTTTTCTGGGTCGAGCA GAAGGCAGGTTGGTCTTCTATTCCCGCCGCTATTCCAACTTATTTGCGAATTCGCGAGGTCCACAAGCGATCGATCGAAT TCATTATGGATCTTGATGTCCATAAGCTCGAGCTTCGGCGACAGCAACTTGACGATCTTTTTGCGGCGAATGCGCGCGAT TGGCGGATGCAATGGGAGGAGATCGACAGGTTCGCGCGGCGCGGCGGCGGGAAGACGGAAGGCTTACCACAAAGGCCAAC CGCGGTTGCTGACGATTTGGCCAGAGGTTACCTGCTTATCGCGGAGAATACAGACTGGGTACCTCTTAGGGACCTGCTGT CTCGCCTCCGAGCCCGAGTAGCTGACATAATGGCTAGCGCCGTTCCTGAAGTCGGGTTCGCGGCTGAAGAATTAGCGCGG CAGTTGCAGGGCCTCAACGGAGAGGTGGAGGTCGTTAACGCCGAGCGGATCAAAGTCTACAATGCCAAACAGTTGAAGAA CGCCGACATTGCCTCCCTAAGACGGCGGATAAAATCGTTAGCGGAGGATTTGCAAAAAAACCAGGACGTTCAGAAGCTTC AACGATATTCTGGCGTGGCTGCCGATCTGACGCCCGACCGATGTCCGACCTGCGAGCAAGCATTGATTGACACCTTGCTC GCACAGGATGCACTAACGGTTGTTATGCCGATTGAGGACAATATCGAATACCTACGCTCGCAATTGAAAATGTTTGAGGA TATCCTTGTGCGGGAAGAAGAGAGTTTCCTCTCTATCGATCAGACCATTGCCCGTATGGACCGTGACCTTGCCGACCTCT ATGGCCGGATCCGCACTTTGCGCACGGACTTGATCTCACCTGGTGCTAACCCGTCGGCGGCTGTGATCGAAGAGCGGGTT CGCACGGAAAACCGAATTAGTGAGCTAGAGGGTATCCAATCCGCCTTTGACGATACAATCGAGCGTCTTGAGGAGCTTTC CGCGACTTATATCGAGCTGCTCAATGAGCGAGCGGCATTCCCGGCAGATAAAATGAGCGCCAAAGACAAAGCCAAGTTCA ACGAACTGACGGCGCTAGTACGAGAGCAGGCGAGAGAATACGGCTTCAGTACGTTCGATCCATATGAACTCACCATCTCC GAAGACACCTATCGTCCGCAGAAGGAAGGATTCGAGATCGGTTTCGAAACCTCAGCAAGTGATGCCGTCCGCCTCAAATG GGCCTACCAATTGGGTTTGCTGGAATTGAGTGCCATCGAAGCCACAAACCATCCGGGGATGCTGCTGTTCGATGAGCCCA GACAGCAGTCTTCGGCAAAGGTAAGCTTCGAAAGCCTACTTAAAAGAGCCGCGTTGGCAAAGCAACGCAATCAACAGGTG ATTTTCTCAACCAGCGAAGAACTTCATAATTTGCAGAGAATTATAGATGGACTGGATTGTGAGAAGCGCATTTTCGCAGG ATATATTATCCAGCCAATCCTCTCATCTTAG
Upstream 100 bases:
>100_bases ACAAGGGCGTTCTTTCCGAAGAGCGCACCTTCCTCTTCGAGGTCGCACCAAAGTTGACGGAGGTCCTAGTGACCAAGATT TGGCGGATGGAGGACTTACA
Downstream 100 bases:
>100_bases TGCTAGCTCGGGCTTTCATATTTGGGTTGTTGTTCCACTTACTGGCAAAATCAGCGTCTGTTCATGTGCCTAGACATTAT CTCTCAACCAAGCACAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MTLRLRHLRMRATTSGGLYGADISFGPGLTVIWADNTKGKSTCMQGMLYALGMERMLSPRREVPLPHAMTSFVETDGKER HAVLESNVSLEIENGAGRIITVHRSIKSLLDNRLIRVDFGPTLTDETTRAQRKDFFVIDPGAALRENGFHYFLEDFLGWE LPTVRRYDAPDGKLYLETIFPLFWVEQKAGWSSIPAAIPTYLRIREVHKRSIEFIMDLDVHKLELRRQQLDDLFAANARD WRMQWEEIDRFARRGGGKTEGLPQRPTAVADDLARGYLLIAENTDWVPLRDLLSRLRARVADIMASAVPEVGFAAEELAR QLQGLNGEVEVVNAERIKVYNAKQLKNADIASLRRRIKSLAEDLQKNQDVQKLQRYSGVAADLTPDRCPTCEQALIDTLL AQDALTVVMPIEDNIEYLRSQLKMFEDILVREEESFLSIDQTIARMDRDLADLYGRIRTLRTDLISPGANPSAAVIEERV RTENRISELEGIQSAFDDTIERLEELSATYIELLNERAAFPADKMSAKDKAKFNELTALVREQAREYGFSTFDPYELTIS EDTYRPQKEGFEIGFETSASDAVRLKWAYQLGLLELSAIEATNHPGMLLFDEPRQQSSAKVSFESLLKRAALAKQRNQQV IFSTSEELHNLQRIIDGLDCEKRIFAGYIIQPILSS
Sequences:
>Translated_676_residues MTLRLRHLRMRATTSGGLYGADISFGPGLTVIWADNTKGKSTCMQGMLYALGMERMLSPRREVPLPHAMTSFVETDGKER HAVLESNVSLEIENGAGRIITVHRSIKSLLDNRLIRVDFGPTLTDETTRAQRKDFFVIDPGAALRENGFHYFLEDFLGWE LPTVRRYDAPDGKLYLETIFPLFWVEQKAGWSSIPAAIPTYLRIREVHKRSIEFIMDLDVHKLELRRQQLDDLFAANARD WRMQWEEIDRFARRGGGKTEGLPQRPTAVADDLARGYLLIAENTDWVPLRDLLSRLRARVADIMASAVPEVGFAAEELAR QLQGLNGEVEVVNAERIKVYNAKQLKNADIASLRRRIKSLAEDLQKNQDVQKLQRYSGVAADLTPDRCPTCEQALIDTLL AQDALTVVMPIEDNIEYLRSQLKMFEDILVREEESFLSIDQTIARMDRDLADLYGRIRTLRTDLISPGANPSAAVIEERV RTENRISELEGIQSAFDDTIERLEELSATYIELLNERAAFPADKMSAKDKAKFNELTALVREQAREYGFSTFDPYELTIS EDTYRPQKEGFEIGFETSASDAVRLKWAYQLGLLELSAIEATNHPGMLLFDEPRQQSSAKVSFESLLKRAALAKQRNQQV IFSTSEELHNLQRIIDGLDCEKRIFAGYIIQPILSS >Mature_675_residues TLRLRHLRMRATTSGGLYGADISFGPGLTVIWADNTKGKSTCMQGMLYALGMERMLSPRREVPLPHAMTSFVETDGKERH AVLESNVSLEIENGAGRIITVHRSIKSLLDNRLIRVDFGPTLTDETTRAQRKDFFVIDPGAALRENGFHYFLEDFLGWEL PTVRRYDAPDGKLYLETIFPLFWVEQKAGWSSIPAAIPTYLRIREVHKRSIEFIMDLDVHKLELRRQQLDDLFAANARDW RMQWEEIDRFARRGGGKTEGLPQRPTAVADDLARGYLLIAENTDWVPLRDLLSRLRARVADIMASAVPEVGFAAEELARQ LQGLNGEVEVVNAERIKVYNAKQLKNADIASLRRRIKSLAEDLQKNQDVQKLQRYSGVAADLTPDRCPTCEQALIDTLLA QDALTVVMPIEDNIEYLRSQLKMFEDILVREEESFLSIDQTIARMDRDLADLYGRIRTLRTDLISPGANPSAAVIEERVR TENRISELEGIQSAFDDTIERLEELSATYIELLNERAAFPADKMSAKDKAKFNELTALVREQAREYGFSTFDPYELTISE DTYRPQKEGFEIGFETSASDAVRLKWAYQLGLLELSAIEATNHPGMLLFDEPRQQSSAKVSFESLLKRAALAKQRNQQVI FSTSEELHNLQRIIDGLDCEKRIFAGYIIQPILSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76839; Mature: 76708
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLRHLRMRATTSGGLYGADISFGPGLTVIWADNTKGKSTCMQGMLYALGMERMLSPR CCEEEEHHHEEECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC REVPLPHAMTSFVETDGKERHAVLESNVSLEIENGAGRIITVHRSIKSLLDNRLIRVDFG CCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEECC PTLTDETTRAQRKDFFVIDPGAALRENGFHYFLEDFLGWELPTVRRYDAPDGKLYLETIF CCCCCCHHHHHCCCEEEECCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHH PLFWVEQKAGWSSIPAAIPTYLRIREVHKRSIEFIMDLDVHKLELRRQQLDDLFAANARD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH WRMQWEEIDRFARRGGGKTEGLPQRPTAVADDLARGYLLIAENTDWVPLRDLLSRLRARV HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHH ADIMASAVPEVGFAAEELARQLQGLNGEVEVVNAERIKVYNAKQLKNADIASLRRRIKSL HHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEECHHHHCCCCHHHHHHHHHHH AEDLQKNQDVQKLQRYSGVAADLTPDRCPTCEQALIDTLLAQDALTVVMPIEDNIEYLRS HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHH QLKMFEDILVREEESFLSIDQTIARMDRDLADLYGRIRTLRTDLISPGANPSAAVIEERV HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RTENRISELEGIQSAFDDTIERLEELSATYIELLNERAAFPADKMSAKDKAKFNELTALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHH REQAREYGFSTFDPYELTISEDTYRPQKEGFEIGFETSASDAVRLKWAYQLGLLELSAIE HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEHHHCCEEEEHEE ATNHPGMLLFDEPRQQSSAKVSFESLLKRAALAKQRNQQVIFSTSEELHNLQRIIDGLDC CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCH EKRIFAGYIIQPILSS HHHHHHHHHHHHHHCC >Mature Secondary Structure TLRLRHLRMRATTSGGLYGADISFGPGLTVIWADNTKGKSTCMQGMLYALGMERMLSPR CEEEEHHHEEECCCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC REVPLPHAMTSFVETDGKERHAVLESNVSLEIENGAGRIITVHRSIKSLLDNRLIRVDFG CCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEECC PTLTDETTRAQRKDFFVIDPGAALRENGFHYFLEDFLGWELPTVRRYDAPDGKLYLETIF CCCCCCHHHHHCCCEEEECCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHH PLFWVEQKAGWSSIPAAIPTYLRIREVHKRSIEFIMDLDVHKLELRRQQLDDLFAANARD HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH WRMQWEEIDRFARRGGGKTEGLPQRPTAVADDLARGYLLIAENTDWVPLRDLLSRLRARV HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHH ADIMASAVPEVGFAAEELARQLQGLNGEVEVVNAERIKVYNAKQLKNADIASLRRRIKSL HHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEEECHHHHCCCCHHHHHHHHHHH AEDLQKNQDVQKLQRYSGVAADLTPDRCPTCEQALIDTLLAQDALTVVMPIEDNIEYLRS HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHH QLKMFEDILVREEESFLSIDQTIARMDRDLADLYGRIRTLRTDLISPGANPSAAVIEERV HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH RTENRISELEGIQSAFDDTIERLEELSATYIELLNERAAFPADKMSAKDKAKFNELTALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHH REQAREYGFSTFDPYELTISEDTYRPQKEGFEIGFETSASDAVRLKWAYQLGLLELSAIE HHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEHHHCCEEEEHEE ATNHPGMLLFDEPRQQSSAKVSFESLLKRAALAKQRNQQVIFSTSEELHNLQRIIDGLDC CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCH EKRIFAGYIIQPILSS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA