| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182679037
Identifier: 182679037
GI number: 182679037
Start: 2370572
End: 2372821
Strand: Direct
Name: 182679037
Synonym: Bind_2073
Alternate gene names: NA
Gene position: 2370572-2372821 (Clockwise)
Preceding gene: 182679036
Following gene: 182679038
Centisome position: 56.85
GC content: 55.24
Gene sequence:
>2250_bases ATGAGTGGAACATTCAGGCGAGGAGCGAGACAATCCTTCCAGTTTTTTAGGTTTTCCACCTTTGCTTTCATCGGACTTCC CGTCTCAGCTTTTGCCCAAAACGCCCCGGTGACGAATATTGCCCCCATTACCATCGAGGCCAGCCCCGACAACAGTCCAT TCGGACGCGCCGATCTGAAACCCGACAATACGGGTAATCTCGCTCGCGTCGCGGCGAGCAGCAGACCGCATACGGAAACC TTCACCCGCGCCGATATCGATGCCCTGAAACCCGTGGATGTCTACGACCTCTTGAGCCATGCGACCGGCGTCATGCCGAC CTTTCAGGGGCGGAAACTTTCCAATAATCTCCAGATTCGCGGCGATTCCAATTACGGCTTCATCATCGATGGCGCCTATA TGCCGCTTGCGACGGCCGGCCGTGTCCTGCGGACCTTGCCGGTCTCGCTCATCGAGCAAGTCGATATCATCCGAGACCCG ACGGCCCTGACGCTCGGTCCGATGACGAATTTGGATACGGCCTCTGGCGCCCTGAACAGCGGTTTCATCGTCATCCGCAC CCGCCGACCGTCAAAGACGGAAGGTGAATCGCGCTCCCGGATCGAGAATTTCGGCACATTCTCAAGTTCAGGTTATGCCG GCACGACCTTTGTCGGCGCGCCTGGCGAGCCCAATGCCTATGTTTCCGGTTTGCTCTCCTATCGCAAGACCAACGGCCCC TCTGGCTATAACGCCTGGGAGAATACACAATCCTCGCAGGTGGCGGGCGGCGTCATTGCTGGCGGCTTCCGAACTGATTT CACAGTCTTTCAGGACCATGCGCGCTATGGTTTTCAACGCGCGACGGATGGCCAAAACGTCTCCTCGCTTGTTGCGCAAC AATGGTCCTTCACGCCAATCGATACATTGGTCGCAACATCGAATTCTCTCTTCACCTGGGACGCGATCAACTCCACCATG CTGATCTTGTCCTATAATCTCGTCTCCGCCAACAATGTGCAGGCGAGCTACGCAAACAGTGCGATCACCTCGAATTATGA TCGCACCTATACATTCAACGTGCACATGCGCCACAATATCCATCTAGGCGATACTTTGCTGCAGCTCGGCACGCAATATG TCACCTATGATTCACCCACCGGCCAGATGTTCAGTGCCGGCTATGCACATTCGGAATCGATTCTGAGCGGCTATGGCAAT CTCGAACATAAGTTCTTCAATGATGCCCTGACCCTCGACGCCTCGGCGAGGGTCGATGACCGCACGATCAATCAAGGCAT CGACCTCTATAATCTGGGTAGCGGCAGCGGCGGCGGTAATGCGGGAAGTGGCACGGGCAGCAATAGTGGCACGAGTCAGG CAGGCTCTGGAACCGGTGGGGGCAAATCCGGGAGTGGCTCCGGCTCCGGCACGGGATCTGGCACCGGATCTAGCTCCACC CTCTATTCTTATTTCTACAATCGGCAATTGCCGATTGCTCTGAATTATGCCGCCGGCGGAACATGGAAAATCCTGCCGCA ATTGCTGGCAACGGCCCGCTATTCCCATACCGAACAGAGTGGGTTACCCATGGCAATCTTGACCACCACGGGAACATCGC TCGCTCCGGAAACGCAAAACAAATGGGAAGTTGGCATCGCGGCGCCAATCGCTCCCTATTTCCAGCCAGGCTTCAATTAT TTCGACATCAATGTCGCAAACGATAAGACACCGACGAGCTATCAAACGATCAATGGCTATCAGACCCCCATCTGGTCGCA ATCGAATACACATAGAAGTGGTTTCGAATTGCTGGCCAATGGGACTGTGCTGCCTGTGGATTGGCTCGGTCACGGCAATC CAGACCTCGTAAATACAGATCTGGGCGATCTCGGTCCAACGACCTATCGCGCAAGCTGGATGCATCTCGGACAAGCTTCG AGTTCATCGATCGCGGTCTATGGCGCGACCTTGGCGCGTGATATTGTCAATTTCACATTGACGCAGAACTGGAACCGGTT CAACGGGACAGTCGCCCTGAGCTATTTCTCTCCGTTCCTGTCGAACTTCAATTCGGCGGACGGTGGCTACCATCAGATCG GCAATGCGGTCGTTGTCGATCTGAGCGTTGGTTACGGTTTCAAACTGGGGCTCTCGGATACACGTATTTCCGTTTACGGC CGCAACATCACCAATCGCAAATATGAAACGGTCTACGGCTATCCCGCCTGGGGGGCCACTTATGGCAGCGAATTGGTGAT CTCGTTCTAA
Upstream 100 bases:
>100_bases AAGATATATATCCCGCCGGGAGGGTTCGCAGGGGGACCCAATTTATCAATAGGCTCGCTCGGATTGCTATTCCCGAGTGA GAACGGCCGGGATAACAAGC
Downstream 100 bases:
>100_bases AATCCGCCTTTTGACCCAGACCGAAGGGTCGCTCCGTCGCTCATGCAAGGCTCTCGTGTCATGAAACGCTGGATCGTCTT GGCTTTCCTTTTAGCGAGCC
Product: TonB-dependent receptor plug
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor Family Protein; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MSGTFRRGARQSFQFFRFSTFAFIGLPVSAFAQNAPVTNIAPITIEASPDNSPFGRADLKPDNTGNLARVAASSRPHTET FTRADIDALKPVDVYDLLSHATGVMPTFQGRKLSNNLQIRGDSNYGFIIDGAYMPLATAGRVLRTLPVSLIEQVDIIRDP TALTLGPMTNLDTASGALNSGFIVIRTRRPSKTEGESRSRIENFGTFSSSGYAGTTFVGAPGEPNAYVSGLLSYRKTNGP SGYNAWENTQSSQVAGGVIAGGFRTDFTVFQDHARYGFQRATDGQNVSSLVAQQWSFTPIDTLVATSNSLFTWDAINSTM LILSYNLVSANNVQASYANSAITSNYDRTYTFNVHMRHNIHLGDTLLQLGTQYVTYDSPTGQMFSAGYAHSESILSGYGN LEHKFFNDALTLDASARVDDRTINQGIDLYNLGSGSGGGNAGSGTGSNSGTSQAGSGTGGGKSGSGSGSGTGSGTGSSST LYSYFYNRQLPIALNYAAGGTWKILPQLLATARYSHTEQSGLPMAILTTTGTSLAPETQNKWEVGIAAPIAPYFQPGFNY FDINVANDKTPTSYQTINGYQTPIWSQSNTHRSGFELLANGTVLPVDWLGHGNPDLVNTDLGDLGPTTYRASWMHLGQAS SSSIAVYGATLARDIVNFTLTQNWNRFNGTVALSYFSPFLSNFNSADGGYHQIGNAVVVDLSVGYGFKLGLSDTRISVYG RNITNRKYETVYGYPAWGATYGSELVISF
Sequences:
>Translated_749_residues MSGTFRRGARQSFQFFRFSTFAFIGLPVSAFAQNAPVTNIAPITIEASPDNSPFGRADLKPDNTGNLARVAASSRPHTET FTRADIDALKPVDVYDLLSHATGVMPTFQGRKLSNNLQIRGDSNYGFIIDGAYMPLATAGRVLRTLPVSLIEQVDIIRDP TALTLGPMTNLDTASGALNSGFIVIRTRRPSKTEGESRSRIENFGTFSSSGYAGTTFVGAPGEPNAYVSGLLSYRKTNGP SGYNAWENTQSSQVAGGVIAGGFRTDFTVFQDHARYGFQRATDGQNVSSLVAQQWSFTPIDTLVATSNSLFTWDAINSTM LILSYNLVSANNVQASYANSAITSNYDRTYTFNVHMRHNIHLGDTLLQLGTQYVTYDSPTGQMFSAGYAHSESILSGYGN LEHKFFNDALTLDASARVDDRTINQGIDLYNLGSGSGGGNAGSGTGSNSGTSQAGSGTGGGKSGSGSGSGTGSGTGSSST LYSYFYNRQLPIALNYAAGGTWKILPQLLATARYSHTEQSGLPMAILTTTGTSLAPETQNKWEVGIAAPIAPYFQPGFNY FDINVANDKTPTSYQTINGYQTPIWSQSNTHRSGFELLANGTVLPVDWLGHGNPDLVNTDLGDLGPTTYRASWMHLGQAS SSSIAVYGATLARDIVNFTLTQNWNRFNGTVALSYFSPFLSNFNSADGGYHQIGNAVVVDLSVGYGFKLGLSDTRISVYG RNITNRKYETVYGYPAWGATYGSELVISF >Mature_748_residues SGTFRRGARQSFQFFRFSTFAFIGLPVSAFAQNAPVTNIAPITIEASPDNSPFGRADLKPDNTGNLARVAASSRPHTETF TRADIDALKPVDVYDLLSHATGVMPTFQGRKLSNNLQIRGDSNYGFIIDGAYMPLATAGRVLRTLPVSLIEQVDIIRDPT ALTLGPMTNLDTASGALNSGFIVIRTRRPSKTEGESRSRIENFGTFSSSGYAGTTFVGAPGEPNAYVSGLLSYRKTNGPS GYNAWENTQSSQVAGGVIAGGFRTDFTVFQDHARYGFQRATDGQNVSSLVAQQWSFTPIDTLVATSNSLFTWDAINSTML ILSYNLVSANNVQASYANSAITSNYDRTYTFNVHMRHNIHLGDTLLQLGTQYVTYDSPTGQMFSAGYAHSESILSGYGNL EHKFFNDALTLDASARVDDRTINQGIDLYNLGSGSGGGNAGSGTGSNSGTSQAGSGTGGGKSGSGSGSGTGSGTGSSSTL YSYFYNRQLPIALNYAAGGTWKILPQLLATARYSHTEQSGLPMAILTTTGTSLAPETQNKWEVGIAAPIAPYFQPGFNYF DINVANDKTPTSYQTINGYQTPIWSQSNTHRSGFELLANGTVLPVDWLGHGNPDLVNTDLGDLGPTTYRASWMHLGQASS SSIAVYGATLARDIVNFTLTQNWNRFNGTVALSYFSPFLSNFNSADGGYHQIGNAVVVDLSVGYGFKLGLSDTRISVYGR NITNRKYETVYGYPAWGATYGSELVISF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80250; Mature: 80119
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTFRRGARQSFQFFRFSTFAFIGLPVSAFAQNAPVTNIAPITIEASPDNSPFGRADLK CCCCCCCCHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC PDNTGNLARVAASSRPHTETFTRADIDALKPVDVYDLLSHATGVMPTFQGRKLSNNLQIR CCCCCCEEEEECCCCCCCCHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEE GDSNYGFIIDGAYMPLATAGRVLRTLPVSLIEQVDIIRDPTALTLGPMTNLDTASGALNS ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GFIVIRTRRPSKTEGESRSRIENFGTFSSSGYAGTTFVGAPGEPNAYVSGLLSYRKTNGP CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC SGYNAWENTQSSQVAGGVIAGGFRTDFTVFQDHARYGFQRATDGQNVSSLVAQQWSFTPI CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCH DTLVATSNSLFTWDAINSTMLILSYNLVSANNVQASYANSAITSNYDRTYTFNVHMRHNI HHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHCCCHHCCCCCEEEEEEEEEEEEC HLGDTLLQLGTQYVTYDSPTGQMFSAGYAHSESILSGYGNLEHKFFNDALTLDASARVDD CHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCEEEECCCCCCCC RTINQGIDLYNLGSGSGGGNAGSGTGSNSGTSQAGSGTGGGKSGSGSGSGTGSGTGSSST HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LYSYFYNRQLPIALNYAAGGTWKILPQLLATARYSHTEQSGLPMAILTTTGTSLAPETQN EEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCCCCC KWEVGIAAPIAPYFQPGFNYFDINVANDKTPTSYQTINGYQTPIWSQSNTHRSGFELLAN CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHEEEC GTVLPVDWLGHGNPDLVNTDLGDLGPTTYRASWMHLGQASSSSIAVYGATLARDIVNFTL CEEEEEECCCCCCCCEECCCCCCCCCCCEEEHEEEECCCCCCCEEEEHHHHHHHHHHEEE TQNWNRFNGTVALSYFSPFLSNFNSADGGYHQIGNAVVVDLSVGYGFKLGLSDTRISVYG ECCCCCCCCEEEEEEHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCEEECCCCCEEEEEE RNITNRKYETVYGYPAWGATYGSELVISF CCCCCCEEEEEEECCCCCCCCCCEEEEEC >Mature Secondary Structure SGTFRRGARQSFQFFRFSTFAFIGLPVSAFAQNAPVTNIAPITIEASPDNSPFGRADLK CCCCCCCHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC PDNTGNLARVAASSRPHTETFTRADIDALKPVDVYDLLSHATGVMPTFQGRKLSNNLQIR CCCCCCEEEEECCCCCCCCHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEE GDSNYGFIIDGAYMPLATAGRVLRTLPVSLIEQVDIIRDPTALTLGPMTNLDTASGALNS ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GFIVIRTRRPSKTEGESRSRIENFGTFSSSGYAGTTFVGAPGEPNAYVSGLLSYRKTNGP CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC SGYNAWENTQSSQVAGGVIAGGFRTDFTVFQDHARYGFQRATDGQNVSSLVAQQWSFTPI CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCH DTLVATSNSLFTWDAINSTMLILSYNLVSANNVQASYANSAITSNYDRTYTFNVHMRHNI HHHHCCCCCEEEEECCCCEEEEEEEEEEECCCCCHHHCCCHHCCCCCEEEEEEEEEEEEC HLGDTLLQLGTQYVTYDSPTGQMFSAGYAHSESILSGYGNLEHKFFNDALTLDASARVDD CHHHHHHHCCCEEEEECCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCEEEECCCCCCCC RTINQGIDLYNLGSGSGGGNAGSGTGSNSGTSQAGSGTGGGKSGSGSGSGTGSGTGSSST HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LYSYFYNRQLPIALNYAAGGTWKILPQLLATARYSHTEQSGLPMAILTTTGTSLAPETQN EEEEHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHCCCCEEEEEECCCCCCCCCCC KWEVGIAAPIAPYFQPGFNYFDINVANDKTPTSYQTINGYQTPIWSQSNTHRSGFELLAN CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHEEEC GTVLPVDWLGHGNPDLVNTDLGDLGPTTYRASWMHLGQASSSSIAVYGATLARDIVNFTL CEEEEEECCCCCCCCEECCCCCCCCCCCEEEHEEEECCCCCCCEEEEHHHHHHHHHHEEE TQNWNRFNGTVALSYFSPFLSNFNSADGGYHQIGNAVVVDLSVGYGFKLGLSDTRISVYG ECCCCCCCCEEEEEEHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCEEECCCCCEEEEEE RNITNRKYETVYGYPAWGATYGSELVISF CCCCCCEEEEEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA