| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is sacC [H]
Identifier: 182678985
GI number: 182678985
Start: 2307626
End: 2309266
Strand: Reverse
Name: sacC [H]
Synonym: Bind_2020
Alternate gene names: 182678985
Gene position: 2309266-2307626 (Counterclockwise)
Preceding gene: 182678987
Following gene: 182678984
Centisome position: 55.38
GC content: 50.64
Gene sequence:
>1641_bases ATGCTGTATAAATATCCTCATCTAACGACTGGATTAGGGGGCTTACTGGCCCGCTTATTCGCCACATTCGTGATTTCATC TGCGATAGAGCTTGGTTCGTTCGGTCTGTTGCATGCCGAGGAGACAGGCACGGTCCAGTGGCGTCCGGCCTTGCATTACA CGCCCGAACGGAACTGGATGAACGATCCAAACGGATTGGTATTCAATAACGGCCTTTATCATTTGTTCTACCAATATAAC CCCAAAGGAAATGTCTGGGGTAATATGTCATGGGGACATGCAACCAGCCCTGATCTGATTCATTGGAATGAACATGATGT GGCGATGTCGGCAAACGAGACCGAAGAGATTTTCTCCGGCTCAATCGTCGTCGACGAACACAATACATCCAGATTAGGCT CGGCGAATTCATCCCCTCTCATCGCACTTTATACGAGTGCGTATAAGGCTGGGTCGGGTCACCCCGCAGGAACTCAGGCA CAATCGCTTGCCTACAGCCAAGACGAAGCGCAAACGTGGCATCCGTATGATCATAATCCCGTATTGACTCTTAGCCCGGA GTCAAAAAACTTTCGAGATCCAAAAATTTCCTGGTATCCGAAAGGAGGTTATTGGCTGCTGACAACTGTTGTCGCGGATG CGCAAGTCGTTAAAATCTATCGCTCCAATAATCTGCTCAACTGGGAATTCCTCAGTGATTTCAGTCTCCCTGGTATCCCT CATCAGGGTGCGCTTTGGGAAATGTCCGATCTTTTCCCTCTTCCTCTTGACGGCGATAAAAACGATCAAAAGTGGGTTAT GATTGTCAATGTCAACCCTTGGTCAATCGCGGGAGGATCCGGCGCGCTTTATTTCGTCGGAGGTTTCGATGGCAAGGTGT TTGTTCCTGAGCATCTTCCTCCGGCAGGCTCGGACCCTTCCCAATATTTGTGGCTCGACCACGGCGCCGACTTTTATGCG GCTGGAACATTTGCCCATGAGCCCCATGGCAAAGCGGTGATCATGGGCTGGATGAGCAATTGGGATTATGCGGAGCATGT CCCGACGGCACCATGGAAAGGGGCAATGGCCCTGCCGCGTGTGCTCGCGTTGAAAACAATCGATGGTATCCCGCAACTCG TCTTTTCTCCCGTCGATCAATATACATCCCTAGTCCAGGGACAGCCGGCGGCGAGAATTGAGACTCTGACCGTCTCCTCG TCAATCAAGGAACTTGACCCGTCCACGCAAGGAACCGTGCAGAATATCGCGGTTACCATCCATCCCGGCGCCGCTCAACG TGCTGGGCTCATCATACGCGGTTCAGCAAAGGGTGATGTGGGGACGCGGATTTTTTATGACACATCCAACCACACATTGA CACTCGATCGTTCCCAATCTGGCGAAACGAACTTTTCAAGTGCATTCAGTAAACAACATATTGTCAACTTGCCGCTAGAG AATGGGGAACTGCGTCTCACAATCATTGTGGATAGGAATTCGGTCGAGGTTTTCGCCAACAATGGCCGCGCAGTCATCAC GGATCTCATTTTTCCGACTCTTGATGACAATCGCATCTCTGTCTTCGCGGAGCATGGCGATGCGACATTCAATGACCTCG CCATTACCAATCTCTCCGATCTGACTAATATAAAGCAGTAA
Upstream 100 bases:
>100_bases TTATCGTATGAAATTCATTTGATGAAATGGGGTTGTGGTGCCATGTGCCATGATCGTGTGACGGAGGCTATTCTTCAGTA AAATGAGAGAAAATGACGAG
Downstream 100 bases:
>100_bases ACTTCATTCAGAGCCCGTTCCGCGTCGATTAGCGTGGAGCTGGCTCTTTCTTTGTCCAAGACATGACTTTTGTCGCAAAA GTGAAGCCCCCTTTTGGATT
Product: levanase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MLYKYPHLTTGLGGLLARLFATFVISSAIELGSFGLLHAEETGTVQWRPALHYTPERNWMNDPNGLVFNNGLYHLFYQYN PKGNVWGNMSWGHATSPDLIHWNEHDVAMSANETEEIFSGSIVVDEHNTSRLGSANSSPLIALYTSAYKAGSGHPAGTQA QSLAYSQDEAQTWHPYDHNPVLTLSPESKNFRDPKISWYPKGGYWLLTTVVADAQVVKIYRSNNLLNWEFLSDFSLPGIP HQGALWEMSDLFPLPLDGDKNDQKWVMIVNVNPWSIAGGSGALYFVGGFDGKVFVPEHLPPAGSDPSQYLWLDHGADFYA AGTFAHEPHGKAVIMGWMSNWDYAEHVPTAPWKGAMALPRVLALKTIDGIPQLVFSPVDQYTSLVQGQPAARIETLTVSS SIKELDPSTQGTVQNIAVTIHPGAAQRAGLIIRGSAKGDVGTRIFYDTSNHTLTLDRSQSGETNFSSAFSKQHIVNLPLE NGELRLTIIVDRNSVEVFANNGRAVITDLIFPTLDDNRISVFAEHGDATFNDLAITNLSDLTNIKQ
Sequences:
>Translated_546_residues MLYKYPHLTTGLGGLLARLFATFVISSAIELGSFGLLHAEETGTVQWRPALHYTPERNWMNDPNGLVFNNGLYHLFYQYN PKGNVWGNMSWGHATSPDLIHWNEHDVAMSANETEEIFSGSIVVDEHNTSRLGSANSSPLIALYTSAYKAGSGHPAGTQA QSLAYSQDEAQTWHPYDHNPVLTLSPESKNFRDPKISWYPKGGYWLLTTVVADAQVVKIYRSNNLLNWEFLSDFSLPGIP HQGALWEMSDLFPLPLDGDKNDQKWVMIVNVNPWSIAGGSGALYFVGGFDGKVFVPEHLPPAGSDPSQYLWLDHGADFYA AGTFAHEPHGKAVIMGWMSNWDYAEHVPTAPWKGAMALPRVLALKTIDGIPQLVFSPVDQYTSLVQGQPAARIETLTVSS SIKELDPSTQGTVQNIAVTIHPGAAQRAGLIIRGSAKGDVGTRIFYDTSNHTLTLDRSQSGETNFSSAFSKQHIVNLPLE NGELRLTIIVDRNSVEVFANNGRAVITDLIFPTLDDNRISVFAEHGDATFNDLAITNLSDLTNIKQ >Mature_546_residues MLYKYPHLTTGLGGLLARLFATFVISSAIELGSFGLLHAEETGTVQWRPALHYTPERNWMNDPNGLVFNNGLYHLFYQYN PKGNVWGNMSWGHATSPDLIHWNEHDVAMSANETEEIFSGSIVVDEHNTSRLGSANSSPLIALYTSAYKAGSGHPAGTQA QSLAYSQDEAQTWHPYDHNPVLTLSPESKNFRDPKISWYPKGGYWLLTTVVADAQVVKIYRSNNLLNWEFLSDFSLPGIP HQGALWEMSDLFPLPLDGDKNDQKWVMIVNVNPWSIAGGSGALYFVGGFDGKVFVPEHLPPAGSDPSQYLWLDHGADFYA AGTFAHEPHGKAVIMGWMSNWDYAEHVPTAPWKGAMALPRVLALKTIDGIPQLVFSPVDQYTSLVQGQPAARIETLTVSS SIKELDPSTQGTVQNIAVTIHPGAAQRAGLIIRGSAKGDVGTRIFYDTSNHTLTLDRSQSGETNFSSAFSKQHIVNLPLE NGELRLTIIVDRNSVEVFANNGRAVITDLIFPTLDDNRISVFAEHGDATFNDLAITNLSDLTNIKQ
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=507, Percent_Identity=31.163708086785, Blast_Score=214, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 60078; Mature: 60078
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKYPHLTTGLGGLLARLFATFVISSAIELGSFGLLHAEETGTVQWRPALHYTPERNWM CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCEEECCCCCCC NDPNGLVFNNGLYHLFYQYNPKGNVWGNMSWGHATSPDLIHWNEHDVAMSANETEEIFSG CCCCCEEECCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEECCCCEEECCCCCHHHHCC SIVVDEHNTSRLGSANSSPLIALYTSAYKAGSGHPAGTQAQSLAYSQDEAQTWHPYDHNP CEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCC VLTLSPESKNFRDPKISWYPKGGYWLLTTVVADAQVVKIYRSNNLLNWEFLSDFSLPGIP EEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCC HQGALWEMSDLFPLPLDGDKNDQKWVMIVNVNPWSIAGGSGALYFVGGFDGKVFVPEHLP CCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCEEECCCCCC PAGSDPSQYLWLDHGADFYAAGTFAHEPHGKAVIMGWMSNWDYAEHVPTAPWKGAMALPR CCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHH VLALKTIDGIPQLVFSPVDQYTSLVQGQPAARIETLTVSSSIKELDPSTQGTVQNIAVTI HHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCCCEEEEEEEE HPGAAQRAGLIIRGSAKGDVGTRIFYDTSNHTLTLDRSQSGETNFSSAFSKQHIVNLPLE ECCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHCCCEEEECCCC NGELRLTIIVDRNSVEVFANNGRAVITDLIFPTLDDNRISVFAEHGDATFNDLAITNLSD CCCEEEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCHH LTNIKQ HHCCCC >Mature Secondary Structure MLYKYPHLTTGLGGLLARLFATFVISSAIELGSFGLLHAEETGTVQWRPALHYTPERNWM CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCEEECCCCCCC NDPNGLVFNNGLYHLFYQYNPKGNVWGNMSWGHATSPDLIHWNEHDVAMSANETEEIFSG CCCCCEEECCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEECCCCEEECCCCCHHHHCC SIVVDEHNTSRLGSANSSPLIALYTSAYKAGSGHPAGTQAQSLAYSQDEAQTWHPYDHNP CEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCC VLTLSPESKNFRDPKISWYPKGGYWLLTTVVADAQVVKIYRSNNLLNWEFLSDFSLPGIP EEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCC HQGALWEMSDLFPLPLDGDKNDQKWVMIVNVNPWSIAGGSGALYFVGGFDGKVFVPEHLP CCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEEEEECCCCEEECCCCCC PAGSDPSQYLWLDHGADFYAAGTFAHEPHGKAVIMGWMSNWDYAEHVPTAPWKGAMALPR CCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCHHHHH VLALKTIDGIPQLVFSPVDQYTSLVQGQPAARIETLTVSSSIKELDPSTQGTVQNIAVTI HHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCCCCEEEEEEEE HPGAAQRAGLIIRGSAKGDVGTRIFYDTSNHTLTLDRSQSGETNFSSAFSKQHIVNLPLE ECCCCCCCCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHCCCEEEECCCC NGELRLTIIVDRNSVEVFANNGRAVITDLIFPTLDDNRISVFAEHGDATFNDLAITNLSD CCCEEEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCHH LTNIKQ HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]