Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678979

Identifier: 182678979

GI number: 182678979

Start: 2299528

End: 2300190

Strand: Reverse

Name: 182678979

Synonym: Bind_2014

Alternate gene names: NA

Gene position: 2300190-2299528 (Counterclockwise)

Preceding gene: 182678982

Following gene: 182678978

Centisome position: 55.16

GC content: 53.85

Gene sequence:

>663_bases
ATGAAAGTCTTGTTTATGTGTGGCTATTTTCCTGACTTGGCGGGCGTGTACGATGCATGGCCTCTGGATTATCAGGATGC
TTTTTCGTTTTGTCGCGCTGTCCGAACTGGCCAATTCGAACGCAATTTTTCCGTTCATACGCAGAAGGATCCAGTCAGGG
TTTGCGCGTCCAATGTTGGTGTCGCTCGCCGTGCTTTCGGACGGTTCATTGAACGCCGTATCACGGAGGAAACATCATGG
CCTTCGCCAGTTCTCGTTCCCATGCCGTCTGAAGATGCGGTCATCGGCGTTGGAACATTTCGTTCCTGGTTTATGCTGAA
CGAGGCCATGGCTCCGACCGAATTCAAATTATCGCCTGTTGACGCCTTGTTCTGGCGGGAAAAGCCTTCGCCGCAGGTTC
TGACCGCGGGGCGGGATGAGCTTTCAACGCTGACGAAGGATTTGATTTGTGATTTCCCGTTGCGTGGTCAGACCGTGGTG
TTAGTGGATGATCTGGTCAGCAGTGGAACCACGCTTTTGGCCGCGCGCGATTGCCTGCAACGTGAAGGCGCGGCCGTTCT
CGGTGCGGTGGTTTGCGGCAAGGTCATTCATGATCGCAAGACACCTGCATTCGGAAGGCAGGAATTTTGGGTCGATGACG
ATGGAACGGCTGATCCATCATGA

Upstream 100 bases:

>100_bases
ACAGAGGAAAATGGTTTCGTCGTTTGAAATTGCGCGTGGCTTCTGCCTCAGCTTTTTCGGCATCCACTTCCCTGCCACAA
GCCTTGTCAGGACAAATGTC

Downstream 100 bases:

>100_bases
GCGCCTGATGGGGCTATGAGATATATTGTGTTGGACGCTTCGGGCGACGCTAGAGTATCAGACACGAGACAAGTCGGACG
TCCGATGCCTAGGGTGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKVLFMCGYFPDLAGVYDAWPLDYQDAFSFCRAVRTGQFERNFSVHTQKDPVRVCASNVGVARRAFGRFIERRITEETSW
PSPVLVPMPSEDAVIGVGTFRSWFMLNEAMAPTEFKLSPVDALFWREKPSPQVLTAGRDELSTLTKDLICDFPLRGQTVV
LVDDLVSSGTTLLAARDCLQREGAAVLGAVVCGKVIHDRKTPAFGRQEFWVDDDGTADPS

Sequences:

>Translated_220_residues
MKVLFMCGYFPDLAGVYDAWPLDYQDAFSFCRAVRTGQFERNFSVHTQKDPVRVCASNVGVARRAFGRFIERRITEETSW
PSPVLVPMPSEDAVIGVGTFRSWFMLNEAMAPTEFKLSPVDALFWREKPSPQVLTAGRDELSTLTKDLICDFPLRGQTVV
LVDDLVSSGTTLLAARDCLQREGAAVLGAVVCGKVIHDRKTPAFGRQEFWVDDDGTADPS
>Mature_220_residues
MKVLFMCGYFPDLAGVYDAWPLDYQDAFSFCRAVRTGQFERNFSVHTQKDPVRVCASNVGVARRAFGRFIERRITEETSW
PSPVLVPMPSEDAVIGVGTFRSWFMLNEAMAPTEFKLSPVDALFWREKPSPQVLTAGRDELSTLTKDLICDFPLRGQTVV
LVDDLVSSGTTLLAARDCLQREGAAVLGAVVCGKVIHDRKTPAFGRQEFWVDDDGTADPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24475; Mature: 24475

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFMCGYFPDLAGVYDAWPLDYQDAFSFCRAVRTGQFERNFSVHTQKDPVRVCASNVG
CEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
VARRAFGRFIERRITEETSWPSPVLVPMPSEDAVIGVGTFRSWFMLNEAMAPTEFKLSPV
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECHHHHHHHHHHHCCCCCCEECCCH
DALFWREKPSPQVLTAGRDELSTLTKDLICDFPLRGQTVVLVDDLVSSGTTLLAARDCLQ
HHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHH
REGAAVLGAVVCGKVIHDRKTPAFGRQEFWVDDDGTADPS
HCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKVLFMCGYFPDLAGVYDAWPLDYQDAFSFCRAVRTGQFERNFSVHTQKDPVRVCASNVG
CEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCC
VARRAFGRFIERRITEETSWPSPVLVPMPSEDAVIGVGTFRSWFMLNEAMAPTEFKLSPV
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECHHHHHHHHHHHCCCCCCEECCCH
DALFWREKPSPQVLTAGRDELSTLTKDLICDFPLRGQTVVLVDDLVSSGTTLLAARDCLQ
HHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHH
REGAAVLGAVVCGKVIHDRKTPAFGRQEFWVDDDGTADPS
HCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA