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The map label for this gene is ydhP [H]

Identifier: 182678974

GI number: 182678974

Start: 2295915

End: 2297141

Strand: Direct

Name: ydhP [H]

Synonym: Bind_2009

Alternate gene names: 182678974

Gene position: 2295915-2297141 (Clockwise)

Preceding gene: 182678972

Following gene: 182678977

Centisome position: 55.06

GC content: 58.84

Gene sequence:

>1227_bases
ATGTCCATGCCCTCTCCCTCTCAGCCGAGCGATCGGACCATTCAACGCGCACTTGCAGCACTTGCCATCGGCTCTTTTTG
CATCGGGACCAGCGAATATGTCATCATGGGGCTTCTGCCGGATATAGCCCGCGATCTTGATGTCACGATTCCGCAGGCTG
GCGTTCTGGTCAGCGCCTATGCCTTGAGCGTTGCCTTCGGCTCGCCCTTTTTGGCGATTGCCACCGCGCGCATGGATCGC
CGGAACGCCATGCTCGTTCTGGCGAGTGTCTTCATCCTCGGCAACGTGCTCTGTGCCCTGGCGCCAACCTATGGGCTCTT
GATGGGTGCACGTATTGTGACGGCCCTCTGCCACGGCGCTTTTTTCGGCATCGGCGCGGTGGTTGCGGCCGCGCTCGTGC
CGCCTCATAAAAAGGGCCAAGCCATTGCCATGATGTTCGGTGGCCTCACCGTTGCCAATGTCCTTGGCGTCCCCTTCGGC
ACCGCGCTTGGCGAGACCCTGAATTGGCGCGAAACCTTCTGGTGTGTCGCCGTGGTCGGCCTGGTGGCTATCGTAACGCT
CTATCGTTGGCTGCCGCGCAACATTCCCGTACCGCCAATGCAGCTCGCACGTGAGGCACGCTCACTTGGCCACCCGCAAG
TGATCCTGGCCATGCTGATCAGCATCCTGACTTCGGCGAGCTTGTTCAGTGTCTTTACCTATATCACGCCAATCCTTGAA
AACGTGACAGGCCTGTCTCCCCACGTTGTGACACTCATTTTGTTTTTGTTCGGTGTCGGTGTAACCTGCGGCAATTTCTT
GGGTGGACGCCTGGGCGATTGGAAGCTGATGCCCTCTGTCATCGGCATACTCGCTTTGCTCATTCCCCTGCTCTGCCTGT
TCCGCATGACGAGTTCAGAGGCGCTGCCTGCCGCCATAACGGTCTTTTGTTGGGGTCTGCTCGCTTTCGCGATGGTTCCA
CCCTTACAGATGCGCGTTGTCGATGAAGCCCGAGAGGCCCCCAACCTCGCATCGACCCTTAATCAAGGAGCTTTCAATTT
CGGCAATGCTATTGGCGCATGGATCGGAGGTCTGCTCCTCACACAGGGCCTTTCCTACGCCCAATTGCCCTGGGTTGGGA
TGACAATCGCAATCATCGCGACCCTCTTCGCCATGCTTTCGCATTGGCTGGACGGCCGGGCGGTGCCAGTGACCGGCTTC
GCCCATGCCACATCGCAAGAACGATGA

Upstream 100 bases:

>100_bases
CAATTGATCTGTTTGATAACCTGCCGCGCTCCTCCGCGGCAGTTTTCCTTTGATTCCCTCAACACCGCCAGCCGTTTCCT
GCTTTCACGGTCAATGCCTC

Downstream 100 bases:

>100_bases
GCAATCTTAGCCCTGGCGGTGATGATGTCGGGGCCCAAACATTCTCTGGCATTCGGGGCTAAGCTGAGAATAGAAATGAT
TCATGCAATGGGTCACATTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSMPSPSQPSDRTIQRALAALAIGSFCIGTSEYVIMGLLPDIARDLDVTIPQAGVLVSAYALSVAFGSPFLAIATARMDR
RNAMLVLASVFILGNVLCALAPTYGLLMGARIVTALCHGAFFGIGAVVAAALVPPHKKGQAIAMMFGGLTVANVLGVPFG
TALGETLNWRETFWCVAVVGLVAIVTLYRWLPRNIPVPPMQLAREARSLGHPQVILAMLISILTSASLFSVFTYITPILE
NVTGLSPHVVTLILFLFGVGVTCGNFLGGRLGDWKLMPSVIGILALLIPLLCLFRMTSSEALPAAITVFCWGLLAFAMVP
PLQMRVVDEAREAPNLASTLNQGAFNFGNAIGAWIGGLLLTQGLSYAQLPWVGMTIAIIATLFAMLSHWLDGRAVPVTGF
AHATSQER

Sequences:

>Translated_408_residues
MSMPSPSQPSDRTIQRALAALAIGSFCIGTSEYVIMGLLPDIARDLDVTIPQAGVLVSAYALSVAFGSPFLAIATARMDR
RNAMLVLASVFILGNVLCALAPTYGLLMGARIVTALCHGAFFGIGAVVAAALVPPHKKGQAIAMMFGGLTVANVLGVPFG
TALGETLNWRETFWCVAVVGLVAIVTLYRWLPRNIPVPPMQLAREARSLGHPQVILAMLISILTSASLFSVFTYITPILE
NVTGLSPHVVTLILFLFGVGVTCGNFLGGRLGDWKLMPSVIGILALLIPLLCLFRMTSSEALPAAITVFCWGLLAFAMVP
PLQMRVVDEAREAPNLASTLNQGAFNFGNAIGAWIGGLLLTQGLSYAQLPWVGMTIAIIATLFAMLSHWLDGRAVPVTGF
AHATSQER
>Mature_407_residues
SMPSPSQPSDRTIQRALAALAIGSFCIGTSEYVIMGLLPDIARDLDVTIPQAGVLVSAYALSVAFGSPFLAIATARMDRR
NAMLVLASVFILGNVLCALAPTYGLLMGARIVTALCHGAFFGIGAVVAAALVPPHKKGQAIAMMFGGLTVANVLGVPFGT
ALGETLNWRETFWCVAVVGLVAIVTLYRWLPRNIPVPPMQLAREARSLGHPQVILAMLISILTSASLFSVFTYITPILEN
VTGLSPHVVTLILFLFGVGVTCGNFLGGRLGDWKLMPSVIGILALLIPLLCLFRMTSSEALPAAITVFCWGLLAFAMVPP
LQMRVVDEAREAPNLASTLNQGAFNFGNAIGAWIGGLLLTQGLSYAQLPWVGMTIAIIATLFAMLSHWLDGRAVPVTGFA
HATSQER

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=374, Percent_Identity=45.7219251336898, Blast_Score=298, Evalue=5e-82,
Organism=Escherichia coli, GI1786595, Length=386, Percent_Identity=33.6787564766839, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI145693198, Length=337, Percent_Identity=29.673590504451, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1787808, Length=358, Percent_Identity=28.4916201117318, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082231, Length=186, Percent_Identity=26.8817204301075, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43231; Mature: 43100

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPSPSQPSDRTIQRALAALAIGSFCIGTSEYVIMGLLPDIARDLDVTIPQAGVLVSAY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALSVAFGSPFLAIATARMDRRNAMLVLASVFILGNVLCALAPTYGLLMGARIVTALCHGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGIGAVVAAALVPPHKKGQAIAMMFGGLTVANVLGVPFGTALGETLNWRETFWCVAVVG
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHH
LVAIVTLYRWLPRNIPVPPMQLAREARSLGHPQVILAMLISILTSASLFSVFTYITPILE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVTGLSPHVVTLILFLFGVGVTCGNFLGGRLGDWKLMPSVIGILALLIPLLCLFRMTSSE
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPAAITVFCWGLLAFAMVPPLQMRVVDEAREAPNLASTLNQGAFNFGNAIGAWIGGLLL
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
TQGLSYAQLPWVGMTIAIIATLFAMLSHWLDGRAVPVTGFAHATSQER
HCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMPSPSQPSDRTIQRALAALAIGSFCIGTSEYVIMGLLPDIARDLDVTIPQAGVLVSAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALSVAFGSPFLAIATARMDRRNAMLVLASVFILGNVLCALAPTYGLLMGARIVTALCHGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFGIGAVVAAALVPPHKKGQAIAMMFGGLTVANVLGVPFGTALGETLNWRETFWCVAVVG
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHH
LVAIVTLYRWLPRNIPVPPMQLAREARSLGHPQVILAMLISILTSASLFSVFTYITPILE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVTGLSPHVVTLILFLFGVGVTCGNFLGGRLGDWKLMPSVIGILALLIPLLCLFRMTSSE
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
ALPAAITVFCWGLLAFAMVPPLQMRVVDEAREAPNLASTLNQGAFNFGNAIGAWIGGLLL
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHH
TQGLSYAQLPWVGMTIAIIATLFAMLSHWLDGRAVPVTGFAHATSQER
HCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]