| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678970
Identifier: 182678970
GI number: 182678970
Start: 2289707
End: 2290771
Strand: Direct
Name: 182678970
Synonym: Bind_2004
Alternate gene names: NA
Gene position: 2289707-2290771 (Clockwise)
Preceding gene: 182678965
Following gene: 182678971
Centisome position: 54.91
GC content: 57.28
Gene sequence:
>1065_bases ATGAACCCTTATTTGCGAATTTTGTCGGTCCTTTCCATCACGGGCCTGCCCTTCTCCTCATTGGCAGAGCCCGTAAAGGT TGAACCCTCAAGGACTGAGGAAACACGAACCATCACCGATATGAGCGGCGTCGCGAGCCAGGTCCCCGCTCATCCTGCCC ATTTCGCCGAACTCTGGTTTGCCCATCCAGCCCTCATGATCCTGCTCCACGCCGCTGACAAAGTCGCCGTCACCGTCGAT CGACCCTCAATGCAACCCTGGATGTACCAAGTCGCGCCCGTTTTGAAGAACGCCATCGAGATCAATGGGCTGGTGCCGAA TGCGGAAGTTCTCATTCGCAAGGGTGTGGATGCGGCTTTCGTTTTTTCCGATTCACCAGCCATCGGCCCCTTGCGGCAGA TGAATATTCCGACCTTTGACGGCGGCTTTTCTGATACCGCGTCGCTGCTGAGTGCCATCAACCTTACAGCCGATGTCATC AATACGGATGAAGCCCGCGCGATTGCACGCCGCTATGAAACGGCTCTCAAAGAAACGGTTCGTTCGACGCGCGAGATCAC CGATCGCCTGAAACCCGAGGAACGATTGAGCGTCCTGCATATTCCATCCGTCAGCCCCCTGAAGGTCGATGGATCTGGCA CGATCATCGATGAATGGATTAAGATCGCCGGTGGCCGGAACGTGGCGGAAAGCCTCAAGGGCAATAGCAAACAGGTTTCC CCCGAACAGGTCGCGGCCTGGAATCCCGATGTCATCATCGTCGCGGGTCATACCGGCGCCTTCGATCCGCAATCCGCGGG CGGCCTATGGCAATCCGTCCGCGCCGTGCACGATCATCGCGTCTATCGCAATCCTTACGGCGTTTTCCCCTGGGACCGCT ATAGCAGCGAATTCCTGTTGCAGGTCCTCTGGACGGCGCAAACCCTGCATCCCAGTCTCTTTCCGAACATTGATATGAAA GCCGAAACCATGCGTTTCTACCGCACCTTTTTCGACTATCCTCTGAGCCCCACGGAAGCAGAACGGATCCTCGCCGCACA GCCACCGGAGGGCTCCGCTCCTTGA
Upstream 100 bases:
>100_bases GAAACTTTCCGGTTTTTCCGCGTTGCCCGCCGCGCCGCCTGCCCGGGCTGGCCATCGTATATAAATCGCAATATAAGTTC TGCCGAAAGAGGCATGGTTG
Downstream 100 bases:
>100_bases CCGCCATTACCTTTGCAAAAGACACAATCAAAACCGCGCCCGGCAAAAGCCTGCTGGCCTTCGCGTGTCTCCTCCTTGTT TTGGTGGTCTCGATCTCCTT
Product: putative ABC-type Fe3+ transport system periplasmic component
Products: NA
Alternate protein names: Iron(III) Dicitrate-Biding Protein; ABC-Type Fe3+ Transport System Periplasmic Component; Membrane Component Of ABC-Transporter; Iron Chelate Uptake ABC Transporter; Lipopolysaccharide Biosynthesis Protein; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNPYLRILSVLSITGLPFSSLAEPVKVEPSRTEETRTITDMSGVASQVPAHPAHFAELWFAHPALMILLHAADKVAVTVD RPSMQPWMYQVAPVLKNAIEINGLVPNAEVLIRKGVDAAFVFSDSPAIGPLRQMNIPTFDGGFSDTASLLSAINLTADVI NTDEARAIARRYETALKETVRSTREITDRLKPEERLSVLHIPSVSPLKVDGSGTIIDEWIKIAGGRNVAESLKGNSKQVS PEQVAAWNPDVIIVAGHTGAFDPQSAGGLWQSVRAVHDHRVYRNPYGVFPWDRYSSEFLLQVLWTAQTLHPSLFPNIDMK AETMRFYRTFFDYPLSPTEAERILAAQPPEGSAP
Sequences:
>Translated_354_residues MNPYLRILSVLSITGLPFSSLAEPVKVEPSRTEETRTITDMSGVASQVPAHPAHFAELWFAHPALMILLHAADKVAVTVD RPSMQPWMYQVAPVLKNAIEINGLVPNAEVLIRKGVDAAFVFSDSPAIGPLRQMNIPTFDGGFSDTASLLSAINLTADVI NTDEARAIARRYETALKETVRSTREITDRLKPEERLSVLHIPSVSPLKVDGSGTIIDEWIKIAGGRNVAESLKGNSKQVS PEQVAAWNPDVIIVAGHTGAFDPQSAGGLWQSVRAVHDHRVYRNPYGVFPWDRYSSEFLLQVLWTAQTLHPSLFPNIDMK AETMRFYRTFFDYPLSPTEAERILAAQPPEGSAP >Mature_354_residues MNPYLRILSVLSITGLPFSSLAEPVKVEPSRTEETRTITDMSGVASQVPAHPAHFAELWFAHPALMILLHAADKVAVTVD RPSMQPWMYQVAPVLKNAIEINGLVPNAEVLIRKGVDAAFVFSDSPAIGPLRQMNIPTFDGGFSDTASLLSAINLTADVI NTDEARAIARRYETALKETVRSTREITDRLKPEERLSVLHIPSVSPLKVDGSGTIIDEWIKIAGGRNVAESLKGNSKQVS PEQVAAWNPDVIIVAGHTGAFDPQSAGGLWQSVRAVHDHRVYRNPYGVFPWDRYSSEFLLQVLWTAQTLHPSLFPNIDMK AETMRFYRTFFDYPLSPTEAERILAAQPPEGSAP
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39017; Mature: 39017
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPYLRILSVLSITGLPFSSLAEPVKVEPSRTEETRTITDMSGVASQVPAHPAHFAELWF CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH AHPALMILLHAADKVAVTVDRPSMQPWMYQVAPVLKNAIEINGLVPNAEVLIRKGVDAAF HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCEEE VFSDSPAIGPLRQMNIPTFDGGFSDTASLLSAINLTADVINTDEARAIARRYETALKETV EECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RSTREITDRLKPEERLSVLHIPSVSPLKVDGSGTIIDEWIKIAGGRNVAESLKGNSKQVS HHHHHHHHHCCHHHHEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCCC PEQVAAWNPDVIIVAGHTGAFDPQSAGGLWQSVRAVHDHRVYRNPYGVFPWDRYSSEFLL HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHH QVLWTAQTLHPSLFPNIDMKAETMRFYRTFFDYPLSPTEAERILAAQPPEGSAP HHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCC >Mature Secondary Structure MNPYLRILSVLSITGLPFSSLAEPVKVEPSRTEETRTITDMSGVASQVPAHPAHFAELWF CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH AHPALMILLHAADKVAVTVDRPSMQPWMYQVAPVLKNAIEINGLVPNAEVLIRKGVDAAF HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCEEE VFSDSPAIGPLRQMNIPTFDGGFSDTASLLSAINLTADVINTDEARAIARRYETALKETV EECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RSTREITDRLKPEERLSVLHIPSVSPLKVDGSGTIIDEWIKIAGGRNVAESLKGNSKQVS HHHHHHHHHCCHHHHEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCCCC PEQVAAWNPDVIIVAGHTGAFDPQSAGGLWQSVRAVHDHRVYRNPYGVFPWDRYSSEFLL HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHH QVLWTAQTLHPSLFPNIDMKAETMRFYRTFFDYPLSPTEAERILAAQPPEGSAP HHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA