| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is osmC [H]
Identifier: 182678960
GI number: 182678960
Start: 2280317
End: 2280748
Strand: Direct
Name: osmC [H]
Synonym: Bind_1994
Alternate gene names: 182678960
Gene position: 2280317-2280748 (Clockwise)
Preceding gene: 182678951
Following gene: 182678962
Centisome position: 54.68
GC content: 59.26
Gene sequence:
>432_bases ATGACAATCGTCCGCAAGGCTTCAGCCAAATGGTCCGGTGGGCTCAAGGATGGCAAGGGCGCTATTTCAACCGAAAGCGG CGCGTTGGACGCCTATCCCTATGGTTTCGCCTCCCGTTTCGAGGGCCAGAAAGGCACCAATCCGGAAGAACTTCTGGGCG CTGCTCATGCCGGCTGCTTCACCATGGCGCTATCGCTCATCCTCGGTGAGGCGAAGCTCGTCGCCACGGAGATGGAAACG ACCGCCAAGGTCTCTCTGGATCAGGTCGAGGGCGGTTTTGCGATCACCAAGGTCCACCTGACCCTGACGGCCAAGATTCC CGGAGCGGACCAGGCAACGTTCACCGAACTCGCCAATAAGGCCAAGGCCAATTGCCCGCTTTCGAAAGTGATCAAGGCCG ACATCAGCCTGGAAGCCACTTTGCTGGCCTGA
Upstream 100 bases:
>100_bases GGAGACGCCCAAAACACAAGTAGGCAGCGCAAGGTAGGCCCGAAACAAGTTTCTTCTACTCGCATGCAGGTTTCCCCTCC TCAAAACGACGGAGCAAGAC
Downstream 100 bases:
>100_bases TCTTTTTGTGACTTGATCGACGCCATACGAAAAGCTCGGCCAGGCCTGTTGCCTGCGCGCGCAAAAGTACGCGCAGGCCG TTCCTATAGCCGTGGTATCA
Product: OsmC family protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTIVRKASAKWSGGLKDGKGAISTESGALDAYPYGFASRFEGQKGTNPEELLGAAHAGCFTMALSLILGEAKLVATEMET TAKVSLDQVEGGFAITKVHLTLTAKIPGADQATFTELANKAKANCPLSKVIKADISLEATLLA
Sequences:
>Translated_143_residues MTIVRKASAKWSGGLKDGKGAISTESGALDAYPYGFASRFEGQKGTNPEELLGAAHAGCFTMALSLILGEAKLVATEMET TAKVSLDQVEGGFAITKVHLTLTAKIPGADQATFTELANKAKANCPLSKVIKADISLEATLLA >Mature_142_residues TIVRKASAKWSGGLKDGKGAISTESGALDAYPYGFASRFEGQKGTNPEELLGAAHAGCFTMALSLILGEAKLVATEMETT AKVSLDQVEGGFAITKVHLTLTAKIPGADQATFTELANKAKANCPLSKVIKADISLEATLLA
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=141, Percent_Identity=58.8652482269503, Blast_Score=176, Evalue=4e-46,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 14830; Mature: 14699
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVRKASAKWSGGLKDGKGAISTESGALDAYPYGFASRFEGQKGTNPEELLGAAHAGCF CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH TMALSLILGEAKLVATEMETTAKVSLDQVEGGFAITKVHLTLTAKIPGADQATFTELANK HHHHHHHHCCHHHEEECCCCHHEEEHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH AKANCPLSKVIKADISLEATLLA HCCCCCHHHHHHHCCCEEEEEEC >Mature Secondary Structure TIVRKASAKWSGGLKDGKGAISTESGALDAYPYGFASRFEGQKGTNPEELLGAAHAGCF CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH TMALSLILGEAKLVATEMETTAKVSLDQVEGGFAITKVHLTLTAKIPGADQATFTELANK HHHHHHHHCCHHHEEECCCCHHEEEHHHCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH AKANCPLSKVIKADISLEATLLA HCCCCCHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]