| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678959
Identifier: 182678959
GI number: 182678959
Start: 2278659
End: 2279783
Strand: Reverse
Name: 182678959
Synonym: Bind_1993
Alternate gene names: NA
Gene position: 2279783-2278659 (Counterclockwise)
Preceding gene: 182678961
Following gene: 182678958
Centisome position: 54.67
GC content: 53.6
Gene sequence:
>1125_bases GTGATTGATCCTTTTGTCGAAAGTTTAATCCGCGCCATCTATGATTGTGTTGTTGATCCTTCCGGCTGGGAGGAAGTTCT GCGGCGTATTGTCACCAAGACCAACGCTGTCTCCGCTTCTATGCAGACGACATTTGATGCAAAGCCCAGCAATATTGCAA GATGGAATGTCGATCCTTTCTATTCAAAGATCTATCTAGAGCATTTTTATACTGTAAATCCTTTCATTCCTCTTCGTATG AACTATATGGCTGAAAAGGTTTATAGTGGAGATAGCCTCACCACGACGGCCTCGTATCGCGAGTCCTCCTTCTTCAATGA ATTCGCCAAGCCGCAGGAGTGGGAAGGCTTCAATGGCATCAGCCTCAATGGACCGGGTTCCGCTGATGTCCTTGCCCTGA TGCATAACCGGAATGCAGATTTTGCGCAGACGGGGGGCGAGGATCTTCTTTCCCGTCTCGCCCCGCACGTCTGTCGAGCC TATGATCTCGGCGGTTTGCTGGCCAAAGCGCATCAGACGACGGATTTTTTGGGGCAGGCTATCGCTGCGGCCGGTTTCGG GACCGTTCTGCTGAGTGAGAATTGCCGGATCATCTATGCCAATCAGGTCGCTGAAGACATGCTCCGCCAGCAAAGCGGTC TTGTTTTCATCAGAGGTGAACTCCTTGCTGAGGCATCGCCACTGACCAGCCAGCTGCAAGCCTTGGTCCGCGCCTGTGTC GATCAAAAAGCTGCGACTTATCCCCTTGGCACGATACTCAAGCTAACGCGCCGCAAAATCGATCAGCCCATCCTCGTCCA TGTTCTGCCCCTCCGAGAAAAGACGGCAGCCATGCTTACCAACAAGGTGCGCCCGGTTGCGGCTCTTTTCCTGATCGATC CGCATCAAGATCTTTCCGCGCGTTTGCAAAGCTTCGCCAATGCCTATGCTCTGACATCGGTAGAGATCGCGATCATGAGC GAAATCATCCAAAGCGACTCGCTGACGATCATCGCGGCGAAACTCGGCATGGCTGCCTCGACCTTGCGGACGCATCTTGG ACGTCTCATGGCCAAGACCGGAGCGAGCAACCGGCTTGCACTCCTGCGCCGCTTTTTCGAAATGGCCAGCTTGGCCATGC CGTGA
Upstream 100 bases:
>100_bases ATGGCATAATATGGGTAGTTTTTTATATTGAATACTCTTTTCCCAAGGGTTTCCCACTCTTGAAAGGTCACGCTTTTGGA ACGATCCATGGTGGATAGGC
Downstream 100 bases:
>100_bases AACGCTATATAAATGCTTAAATTTTATCTGATAAGCGCATGCCACCACTTTATCATAGCATTAGCAGTTAATAGAGTAAA ACCAGTTTCTTACATATCGG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Regulatory Protein LuxR; Two-Component Response Regulator Protein; Transcriptionat Regulator LuxR Family
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIDPFVESLIRAIYDCVVDPSGWEEVLRRIVTKTNAVSASMQTTFDAKPSNIARWNVDPFYSKIYLEHFYTVNPFIPLRM NYMAEKVYSGDSLTTTASYRESSFFNEFAKPQEWEGFNGISLNGPGSADVLALMHNRNADFAQTGGEDLLSRLAPHVCRA YDLGGLLAKAHQTTDFLGQAIAAAGFGTVLLSENCRIIYANQVAEDMLRQQSGLVFIRGELLAEASPLTSQLQALVRACV DQKAATYPLGTILKLTRRKIDQPILVHVLPLREKTAAMLTNKVRPVAALFLIDPHQDLSARLQSFANAYALTSVEIAIMS EIIQSDSLTIIAAKLGMAASTLRTHLGRLMAKTGASNRLALLRRFFEMASLAMP
Sequences:
>Translated_374_residues MIDPFVESLIRAIYDCVVDPSGWEEVLRRIVTKTNAVSASMQTTFDAKPSNIARWNVDPFYSKIYLEHFYTVNPFIPLRM NYMAEKVYSGDSLTTTASYRESSFFNEFAKPQEWEGFNGISLNGPGSADVLALMHNRNADFAQTGGEDLLSRLAPHVCRA YDLGGLLAKAHQTTDFLGQAIAAAGFGTVLLSENCRIIYANQVAEDMLRQQSGLVFIRGELLAEASPLTSQLQALVRACV DQKAATYPLGTILKLTRRKIDQPILVHVLPLREKTAAMLTNKVRPVAALFLIDPHQDLSARLQSFANAYALTSVEIAIMS EIIQSDSLTIIAAKLGMAASTLRTHLGRLMAKTGASNRLALLRRFFEMASLAMP >Mature_374_residues MIDPFVESLIRAIYDCVVDPSGWEEVLRRIVTKTNAVSASMQTTFDAKPSNIARWNVDPFYSKIYLEHFYTVNPFIPLRM NYMAEKVYSGDSLTTTASYRESSFFNEFAKPQEWEGFNGISLNGPGSADVLALMHNRNADFAQTGGEDLLSRLAPHVCRA YDLGGLLAKAHQTTDFLGQAIAAAGFGTVLLSENCRIIYANQVAEDMLRQQSGLVFIRGELLAEASPLTSQLQALVRACV DQKAATYPLGTILKLTRRKIDQPILVHVLPLREKTAAMLTNKVRPVAALFLIDPHQDLSARLQSFANAYALTSVEIAIMS EIIQSDSLTIIAAKLGMAASTLRTHLGRLMAKTGASNRLALLRRFFEMASLAMP
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41241; Mature: 41241
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPFVESLIRAIYDCVVDPSGWEEVLRRIVTKTNAVSASMQTTFDAKPSNIARWNVDPF CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHH YSKIYLEHFYTVNPFIPLRMNYMAEKVYSGDSLTTTASYRESSFFNEFAKPQEWEGFNGI HHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCE SLNGPGSADVLALMHNRNADFAQTGGEDLLSRLAPHVCRAYDLGGLLAKAHQTTDFLGQA ECCCCCCHHHHHEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAGFGTVLLSENCRIIYANQVAEDMLRQQSGLVFIRGELLAEASPLTSQLQALVRACV HHHHCCHHEEECCCCEEEEHHHHHHHHHHHHCCEEEEECHHHHCCCCHHHHHHHHHHHHH DQKAATYPLGTILKLTRRKIDQPILVHVLPLREKTAAMLTNKVRPVAALFLIDPHQDLSA HCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHH RLQSFANAYALTSVEIAIMSEIIQSDSLTIIAAKLGMAASTLRTHLGRLMAKTGASNRLA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLRRFFEMASLAMP HHHHHHHHHHHCCC >Mature Secondary Structure MIDPFVESLIRAIYDCVVDPSGWEEVLRRIVTKTNAVSASMQTTFDAKPSNIARWNVDPF CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHH YSKIYLEHFYTVNPFIPLRMNYMAEKVYSGDSLTTTASYRESSFFNEFAKPQEWEGFNGI HHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCE SLNGPGSADVLALMHNRNADFAQTGGEDLLSRLAPHVCRAYDLGGLLAKAHQTTDFLGQA ECCCCCCHHHHHEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAAGFGTVLLSENCRIIYANQVAEDMLRQQSGLVFIRGELLAEASPLTSQLQALVRACV HHHHCCHHEEECCCCEEEEHHHHHHHHHHHHCCEEEEECHHHHCCCCHHHHHHHHHHHHH DQKAATYPLGTILKLTRRKIDQPILVHVLPLREKTAAMLTNKVRPVAALFLIDPHQDLSA HCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHH RLQSFANAYALTSVEIAIMSEIIQSDSLTIIAAKLGMAASTLRTHLGRLMAKTGASNRLA HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LLRRFFEMASLAMP HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA