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The map label for this gene is nrtC [H]

Identifier: 182678933

GI number: 182678933

Start: 2242035

End: 2243003

Strand: Reverse

Name: nrtC [H]

Synonym: Bind_1967

Alternate gene names: 182678933

Gene position: 2243003-2242035 (Counterclockwise)

Preceding gene: 182678934

Following gene: 182678932

Centisome position: 53.79

GC content: 59.24

Gene sequence:

>969_bases
ATGAGCGGACTTCCCATTCGTATCGGACTGTTGCGTCTGGCTGATAGCGCGCCGGTCCTCGTGGCGCACCGCTTCGGGCT
TTTTCAGGCGGCTGGGATCGAAGCCCAGATTTCGGTGGAGCCCTCCTGGGCCAATCTCGCCGATAAGCTGACCTGGGGCG
CGCTCGATGCCGCGATCATGTTTCCGCCACTGGCCTTGGCCACGGCGGCGGGGCAGCGTGGGCGCAGGGTCGGTCTTCAT
ATCGCCGCCGCGCTGAGCCGGGGTGGCAATATGATCGTGCTGCGAGGGATGAGGCCCGATGACATGAGCCGGCCTTTTGG
CGACAATGCGCGGCGGCAAATCTTTGACAGCTGGAAGCAACGGCTTGGCCGCATGCCGCGTCTCGCGGTCGTCCATATTT
TCTCGACCCACAATCTGATCCTGCGCCGTTTTCTAGCCTCGATCGATATCGATCCCGATCATGCCGTGGAAACCCTTGTC
ATGCCGCCGGATCAGATGGTCACGGCATTGGCGCGCCAAGAGATCGATGGATTTTGTGCCGGTCCGCCTTGGGGGGCCGA
AGCCTGTCTCGATAGACTTGGGTTCATGATCGCGGGATCGGCGGATGTGGTGCCCGGCCATATCGAGAAATGCCTGATCG
TCTCGCAAAATTGGCTGGATAGAGGGTCAACAGGGCTGTCTCTTCTTCAAACCGTAATATCAGAGGGCATTCATCTCTGT
AACGATCAAGAGCGCCAGCATGAAATTGCTCAATTGCTGGCCACGGATGTCGCGCATGGCGGTCTTGGCCTGCCGCTCGC
CGCGACCCTTTCCGTCATGCCCAGCGGTGAGGGGCTTGAACGAATGGAATTTTGTTCTTCCCTGACAGTATCCGATGCGG
ATCTCGCCTGGTGTGTCAGTGACATGCAGCGTTTGGACTGGCTTTCGCGGGAGCAGAATGGAGATTTGCTTGTGAAGAAG
AGCGCCTAA

Upstream 100 bases:

>100_bases
AGGCCTATCGCTGGCTGCGGCGGCGGGCCATGGATCAGGCGAGGAAATTGGCCGACGTGGCGGAAGATTATCTTCGTACA
AGTTCAGAAGGTCACGAAGG

Downstream 100 bases:

>100_bases
CCCGATCGTTCCGATGATCGGATCTCATGCCGTGGTGTTGCTTCTTTCTGAGCGAGAACATTCCTCGTTCATTCGGATGC
ATGAGCGATGCTATAAGCCT

Product: nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSGLPIRIGLLRLADSAPVLVAHRFGLFQAAGIEAQISVEPSWANLADKLTWGALDAAIMFPPLALATAAGQRGRRVGLH
IAAALSRGGNMIVLRGMRPDDMSRPFGDNARRQIFDSWKQRLGRMPRLAVVHIFSTHNLILRRFLASIDIDPDHAVETLV
MPPDQMVTALARQEIDGFCAGPPWGAEACLDRLGFMIAGSADVVPGHIEKCLIVSQNWLDRGSTGLSLLQTVISEGIHLC
NDQERQHEIAQLLATDVAHGGLGLPLAATLSVMPSGEGLERMEFCSSLTVSDADLAWCVSDMQRLDWLSREQNGDLLVKK
SA

Sequences:

>Translated_322_residues
MSGLPIRIGLLRLADSAPVLVAHRFGLFQAAGIEAQISVEPSWANLADKLTWGALDAAIMFPPLALATAAGQRGRRVGLH
IAAALSRGGNMIVLRGMRPDDMSRPFGDNARRQIFDSWKQRLGRMPRLAVVHIFSTHNLILRRFLASIDIDPDHAVETLV
MPPDQMVTALARQEIDGFCAGPPWGAEACLDRLGFMIAGSADVVPGHIEKCLIVSQNWLDRGSTGLSLLQTVISEGIHLC
NDQERQHEIAQLLATDVAHGGLGLPLAATLSVMPSGEGLERMEFCSSLTVSDADLAWCVSDMQRLDWLSREQNGDLLVKK
SA
>Mature_321_residues
SGLPIRIGLLRLADSAPVLVAHRFGLFQAAGIEAQISVEPSWANLADKLTWGALDAAIMFPPLALATAAGQRGRRVGLHI
AAALSRGGNMIVLRGMRPDDMSRPFGDNARRQIFDSWKQRLGRMPRLAVVHIFSTHNLILRRFLASIDIDPDHAVETLVM
PPDQMVTALARQEIDGFCAGPPWGAEACLDRLGFMIAGSADVVPGHIEKCLIVSQNWLDRGSTGLSLLQTVISEGIHLCN
DQERQHEIAQLLATDVAHGGLGLPLAATLSVMPSGEGLERMEFCSSLTVSDADLAWCVSDMQRLDWLSREQNGDLLVKKS
A

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 34908; Mature: 34777

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPIRIGLLRLADSAPVLVAHRFGLFQAAGIEAQISVEPSWANLADKLTWGALDAAIM
CCCCCEEEEEEEECCCCCEEEHHHHCHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH
FPPLALATAAGQRGRRVGLHIAAALSRGGNMIVLRGMRPDDMSRPFGDNARRQIFDSWKQ
CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
RLGRMPRLAVVHIFSTHNLILRRFLASIDIDPDHAVETLVMPPDQMVTALARQEIDGFCA
HHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHCCCEEC
GPPWGAEACLDRLGFMIAGSADVVPGHIEKCLIVSQNWLDRGSTGLSLLQTVISEGIHLC
CCCCCHHHHHHHHCEEEECCCCCCCCHHHHEEEECCHHCCCCCHHHHHHHHHHHCCHHHC
NDQERQHEIAQLLATDVAHGGLGLPLAATLSVMPSGEGLERMEFCSSLTVSDADLAWCVS
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHH
DMQRLDWLSREQNGDLLVKKSA
HHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
SGLPIRIGLLRLADSAPVLVAHRFGLFQAAGIEAQISVEPSWANLADKLTWGALDAAIM
CCCCEEEEEEEECCCCCEEEHHHHCHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHH
FPPLALATAAGQRGRRVGLHIAAALSRGGNMIVLRGMRPDDMSRPFGDNARRQIFDSWKQ
CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
RLGRMPRLAVVHIFSTHNLILRRFLASIDIDPDHAVETLVMPPDQMVTALARQEIDGFCA
HHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHHCCCEEC
GPPWGAEACLDRLGFMIAGSADVVPGHIEKCLIVSQNWLDRGSTGLSLLQTVISEGIHLC
CCCCCHHHHHHHHCEEEECCCCCCCCHHHHEEEECCHHCCCCCHHHHHHHHHHHCCHHHC
NDQERQHEIAQLLATDVAHGGLGLPLAATLSVMPSGEGLERMEFCSSLTVSDADLAWCVS
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHH
DMQRLDWLSREQNGDLLVKKSA
HHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]