| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678917
Identifier: 182678917
GI number: 182678917
Start: 2223079
End: 2223822
Strand: Reverse
Name: 182678917
Synonym: Bind_1951
Alternate gene names: NA
Gene position: 2223822-2223079 (Counterclockwise)
Preceding gene: 182678918
Following gene: 182678915
Centisome position: 53.33
GC content: 61.83
Gene sequence:
>744_bases TTGCGTTTTTCTGCTTCCCTTCCTTCCGTAAGCCGGTTGCTGCTCGCCCTTGCCCTGGGGGGAGCCGGCCTCTTGCCTTG TGGTTTCGCGCGAGCGGATCGGATCAAACATCCGATCGCGGTCTTTTCGGGTCTCGACAAGATCACCGGGCGGATCATTT CCTTCGAGGTCGCGACCGATGAGACGGTCCAATTCGGCTCGTTGCAGATCACCGAGCGCGCCTGCTACACACGGCCCTCG ACGGAAACGCCGCAGACGATCACTTTCGTCGAGGTCGATGAAATCGACGCCGCCGACAAGACCAAAACCCCGAAACAGAT TTTCGCCGGCTGGATGTTTGCCGCAAGCCCGGGGCTGCATGCCTTGGAACATCCCGTCTATGATATCTGGCTGAACGATT GCAAAGGCGGCAAAGAGGTTCTGCCGAGCCCGGATACAGCAGCGGGTTTGCCAGCAACGCCGGACAATGCGAAAGAGGCT TCGGACATCGACCCGTCGGAAGCGCCGAAGCCCAGCCCAGCCAAATCCAAGTCAAAACCCAAGCCCAAACCGGTTCAACC GCCACCTGACGATTCGTTCGATGATCCGCTGGCGCCTCCGGCCATGCGTCGGGCTCCGCCCGATGACGGACCCGTCGAAG TGGGGCCACCGCCCGGCCTGATCCCAGACGCTCCTCCTCCTGAGCGGCGCAGGCGCAAACGTGTTCCACCACCGGCCGAT GCGCCGCCGGATGGTTTCTACTGA
Upstream 100 bases:
>100_bases CAACCGGTGACTATGAGGCTTGGTCGCCGGAAGCTTGAGCACCGACCAATTGTAACGGCGGCCCCCGCGATCGGCGGATC ACGAAAATCACGAGAGCTGT
Downstream 100 bases:
>100_bases GACGGGTCAGTCTTTACGCTCCGCCGTGTTCTGGCGCTGTGTTCTGACGGATTGTAGCGAGCACTTCGGCTCCCGAAATC CTCTGACCCTTGGGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; Signal Peptide Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRFSASLPSVSRLLLALALGGAGLLPCGFARADRIKHPIAVFSGLDKITGRIISFEVATDETVQFGSLQITERACYTRPS TETPQTITFVEVDEIDAADKTKTPKQIFAGWMFAASPGLHALEHPVYDIWLNDCKGGKEVLPSPDTAAGLPATPDNAKEA SDIDPSEAPKPSPAKSKSKPKPKPVQPPPDDSFDDPLAPPAMRRAPPDDGPVEVGPPPGLIPDAPPPERRRRKRVPPPAD APPDGFY
Sequences:
>Translated_247_residues MRFSASLPSVSRLLLALALGGAGLLPCGFARADRIKHPIAVFSGLDKITGRIISFEVATDETVQFGSLQITERACYTRPS TETPQTITFVEVDEIDAADKTKTPKQIFAGWMFAASPGLHALEHPVYDIWLNDCKGGKEVLPSPDTAAGLPATPDNAKEA SDIDPSEAPKPSPAKSKSKPKPKPVQPPPDDSFDDPLAPPAMRRAPPDDGPVEVGPPPGLIPDAPPPERRRRKRVPPPAD APPDGFY >Mature_247_residues MRFSASLPSVSRLLLALALGGAGLLPCGFARADRIKHPIAVFSGLDKITGRIISFEVATDETVQFGSLQITERACYTRPS TETPQTITFVEVDEIDAADKTKTPKQIFAGWMFAASPGLHALEHPVYDIWLNDCKGGKEVLPSPDTAAGLPATPDNAKEA SDIDPSEAPKPSPAKSKSKPKPKPVQPPPDDSFDDPLAPPAMRRAPPDDGPVEVGPPPGLIPDAPPPERRRRKRVPPPAD APPDGFY
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26377; Mature: 26377
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSASLPSVSRLLLALALGGAGLLPCGFARADRIKHPIAVFSGLDKITGRIISFEVATD CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCEEEEEEECCC ETVQFGSLQITERACYTRPSTETPQTITFVEVDEIDAADKTKTPKQIFAGWMFAASPGLH CEEECCCEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH ALEHPVYDIWLNDCKGGKEVLPSPDTAAGLPATPDNAKEASDIDPSEAPKPSPAKSKSKP HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPKPVQPPPDDSFDDPLAPPAMRRAPPDDGPVEVGPPPGLIPDAPPPERRRRKRVPPPAD CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCC APPDGFY CCCCCCC >Mature Secondary Structure MRFSASLPSVSRLLLALALGGAGLLPCGFARADRIKHPIAVFSGLDKITGRIISFEVATD CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCEEEEEEECCC ETVQFGSLQITERACYTRPSTETPQTITFVEVDEIDAADKTKTPKQIFAGWMFAASPGLH CEEECCCEEEEHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCH ALEHPVYDIWLNDCKGGKEVLPSPDTAAGLPATPDNAKEASDIDPSEAPKPSPAKSKSKP HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KPKPVQPPPDDSFDDPLAPPAMRRAPPDDGPVEVGPPPGLIPDAPPPERRRRKRVPPPAD CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCC APPDGFY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA