| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is yceI [C]
Identifier: 182678902
GI number: 182678902
Start: 2204908
End: 2205483
Strand: Direct
Name: yceI [C]
Synonym: Bind_1935
Alternate gene names: 182678902
Gene position: 2204908-2205483 (Clockwise)
Preceding gene: 182678901
Following gene: 182678903
Centisome position: 52.87
GC content: 58.68
Gene sequence:
>576_bases ATGTTCGCTGTTACCCCTTCTCTCCGCCGCGCCCTTTTGGGGATCGTGCTCCTTGCTCCCGTCACGCATGCCGATGCGGC GGATTGGACCATAGACAAGGCCCATAGCACACTCGGCTTTTCCGGCACCCAGACCGGAACAAAGTTTCAAGGCCATTTTA CCCGTTACGATGGCAGCATCCATTTCGATCCCGACCATCCCGAAACGGGGCATGCCCTGATCACCATAGATATGGCGAGC GCCACGACCGGCGATCGGCAGCGCGACGAGGCTCTTCCTGGCGGCGATTGGTTCAATACCAAGACCTTTCCCAAGGCGAC CTTCGAGATCAAAAGTTTTCGGCCTATAAACGGCAATAATTTTGAAGCGCTGGGTACGTTGACTCTGCGTGGCATCAGCC ATGAAGCGACCCTGCCCTTCGCGCTAGACATTACGGGCGATGCCGCTCACGCCAAGGGCCATCTTGAACTCGTCCGCACC GCTTTCGGTGTCGGTCAGGGCACCTGGGCCTCGGGCCAATGGGTCGCGCTGGAAGTCGGCGTCGATGTCGATCTCATCGC GCGGCAATCTCCTTAA
Upstream 100 bases:
>100_bases TGCATGCAGGTGCGGCGCTGCGGCATCATTTCATCCTTCATGATCGGATCTTGCAGCGGATGCTGCCGCGCTGACGCAAG GTCAGGCAATAGGTTTCACC
Downstream 100 bases:
>100_bases AAACCCCTCAGGGCAAGGATTCGACCTTGCCATCCGAGGGCAGTGGCTTCGCCCAGGGCGCGGTCGCGAAACATTTGGCG AGATAATCCAACAAAACCGT
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MFAVTPSLRRALLGIVLLAPVTHADAADWTIDKAHSTLGFSGTQTGTKFQGHFTRYDGSIHFDPDHPETGHALITIDMAS ATTGDRQRDEALPGGDWFNTKTFPKATFEIKSFRPINGNNFEALGTLTLRGISHEATLPFALDITGDAAHAKGHLELVRT AFGVGQGTWASGQWVALEVGVDVDLIARQSP
Sequences:
>Translated_191_residues MFAVTPSLRRALLGIVLLAPVTHADAADWTIDKAHSTLGFSGTQTGTKFQGHFTRYDGSIHFDPDHPETGHALITIDMAS ATTGDRQRDEALPGGDWFNTKTFPKATFEIKSFRPINGNNFEALGTLTLRGISHEATLPFALDITGDAAHAKGHLELVRT AFGVGQGTWASGQWVALEVGVDVDLIARQSP >Mature_191_residues MFAVTPSLRRALLGIVLLAPVTHADAADWTIDKAHSTLGFSGTQTGTKFQGHFTRYDGSIHFDPDHPETGHALITIDMAS ATTGDRQRDEALPGGDWFNTKTFPKATFEIKSFRPINGNNFEALGTLTLRGISHEATLPFALDITGDAAHAKGHLELVRT AFGVGQGTWASGQWVALEVGVDVDLIARQSP
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=146, Percent_Identity=32.1917808219178, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20537; Mature: 20537
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVTPSLRRALLGIVLLAPVTHADAADWTIDKAHSTLGFSGTQTGTKFQGHFTRYDGSI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECEEEEECCEE HFDPDHPETGHALITIDMASATTGDRQRDEALPGGDWFNTKTFPKATFEIKSFRPINGNN EECCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC FEALGTLTLRGISHEATLPFALDITGDAAHAKGHLELVRTAFGVGQGTWASGQWVALEVG EEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEC VDVDLIARQSP CCEEEEEECCC >Mature Secondary Structure MFAVTPSLRRALLGIVLLAPVTHADAADWTIDKAHSTLGFSGTQTGTKFQGHFTRYDGSI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECEEEEECCEE HFDPDHPETGHALITIDMASATTGDRQRDEALPGGDWFNTKTFPKATFEIKSFRPINGNN EECCCCCCCCCEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCC FEALGTLTLRGISHEATLPFALDITGDAAHAKGHLELVRTAFGVGQGTWASGQWVALEVG EEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEC VDVDLIARQSP CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA