Click here to switch to the map view.

The map label for this gene is 182678895

Identifier: 182678895

GI number: 182678895

Start: 2198117

End: 2198794

Strand: Reverse

Name: 182678895

Synonym: Bind_1928

Alternate gene names: NA

Gene position: 2198794-2198117 (Counterclockwise)

Preceding gene: 182678898

Following gene: 182678894

Centisome position: 52.73

GC content: 60.47

Gene sequence:

>678_bases
ATGACGGATGCCATGCCTTCCCCGGCTCTAATCGATGGATCTTTCGTGAGCGATGAACTGGCGGCCTATGCGGCGTCGAT
CCGTGCCTGCACGCTTTGCCGCGACCAGCCGCTGAAACTGCCTTTGCCGCATCCGCCGCGCCCAGTGCTGCGGGTTTCCT
CAACGGCAAGGCTTTTGATCGCCAGCCAGGCGCCTGGGGTGCGCGTGCATCAGACCGGCCTTTCCTTCAATGATGCTTCG
GGCGACCGTTTGCGCGGCTGGATGGGCGTCGGCCGCGATATTTTCTATGATGAAGCGCGGATCGCCATTGTGCCCATGGG
TTTTTGCTTTCCGGGTCATGACGCGAAAAAAGGTGATTTGCCTCCAAGACCGGAATGCCGCCAGACTTGGCACGACGGCC
TGTTTGGGCTGATGCCGCAAATCGAAATGATTCTGGCGATCGGCCGCTATGCCCAGGACTATCATTTCGCGCGGCTTGGG
CGCCCCTTGCCCAAAAATCTGCGGGTGGACGACATCATCCGGCGGGGTGCTGAGCTCTCTCCTGCCTCGCCGCGCATCGT
TGCCTTGCCGCATCCCTCCTGGCGTAATAGCGGCTGGCTCAAGCGCAATCCGTGGTTCGAGGAAGAGATTCTTCCTCCCC
TTCGAGAAATTGTCGCCAGTCTAATCGGTCCGCCCTGA

Upstream 100 bases:

>100_bases
CATGGAAAGGACTCTAATCTCTGGACCTGACGCGAGGCCGGATTGCACGACTTTTGTGTGGCGGTGCTTTTTTTGACGAA
CGGCCCTTTCAGGGACCATG

Downstream 100 bases:

>100_bases
CGACAGGCAAAAGACATGGGCATATTCGGCCCCAGCGCGGATAAGGTTTTTCTTTTCAAACGGCGTCGGAGAGAACTAAG
CTATCGCCGTTTACATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTDAMPSPALIDGSFVSDELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLIASQAPGVRVHQTGLSFNDAS
GDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDLPPRPECRQTWHDGLFGLMPQIEMILAIGRYAQDYHFARLG
RPLPKNLRVDDIIRRGAELSPASPRIVALPHPSWRNSGWLKRNPWFEEEILPPLREIVASLIGPP

Sequences:

>Translated_225_residues
MTDAMPSPALIDGSFVSDELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLIASQAPGVRVHQTGLSFNDAS
GDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDLPPRPECRQTWHDGLFGLMPQIEMILAIGRYAQDYHFARLG
RPLPKNLRVDDIIRRGAELSPASPRIVALPHPSWRNSGWLKRNPWFEEEILPPLREIVASLIGPP
>Mature_224_residues
TDAMPSPALIDGSFVSDELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLIASQAPGVRVHQTGLSFNDASG
DRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDLPPRPECRQTWHDGLFGLMPQIEMILAIGRYAQDYHFARLGR
PLPKNLRVDDIIRRGAELSPASPRIVALPHPSWRNSGWLKRNPWFEEEILPPLREIVASLIGPP

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24994; Mature: 24863

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAMPSPALIDGSFVSDELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLI
CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEE
ASQAPGVRVHQTGLSFNDASGDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDL
ECCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEEEEEEECCCCCCCCCCC
PPRPECRQTWHDGLFGLMPQIEMILAIGRYAQDYHFARLGRPLPKNLRVDDIIRRGAELS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC
PASPRIVALPHPSWRNSGWLKRNPWFEEEILPPLREIVASLIGPP
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDAMPSPALIDGSFVSDELAAYAASIRACTLCRDQPLKLPLPHPPRPVLRVSSTARLLI
CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEE
ASQAPGVRVHQTGLSFNDASGDRLRGWMGVGRDIFYDEARIAIVPMGFCFPGHDAKKGDL
ECCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCEEECCCEEEEEEEEEECCCCCCCCCCC
PPRPECRQTWHDGLFGLMPQIEMILAIGRYAQDYHFARLGRPLPKNLRVDDIIRRGAELS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC
PASPRIVALPHPSWRNSGWLKRNPWFEEEILPPLREIVASLIGPP
CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]