Click here to switch to the map view.

The map label for this gene is 182678879

Identifier: 182678879

GI number: 182678879

Start: 2181098

End: 2182834

Strand: Direct

Name: 182678879

Synonym: Bind_1912

Alternate gene names: NA

Gene position: 2181098-2182834 (Clockwise)

Preceding gene: 182678878

Following gene: 182678883

Centisome position: 52.3

GC content: 55.9

Gene sequence:

>1737_bases
ATGACCGGCCCACAAGCGAAATCCCTTATTGAAAGCGCCCTTTCCTTTTCACGTCAGGGACAATGGAGCGAGGCTCTCGA
TAAAGCCGAGACAGCCGTTTCCCTTTATCGTGTTCTGGCAGAGGAACAATCCAGCGCATTCAACCCTGGCCTAGCCGAAG
CCCTTGATATTCTTGCCAATATTCTGAGCGAAATCGGTGAAAAGGAAAAAGCTCTGGCTTTTGCGGAAGAAGCTCTGGCG
CTCCGCCGCGTCCTGGCGGATAGTGGCTCCGACACATTCATTGCGGACCTGGCTTTCTCTCTCAACACTTATGCGACATG
CCTTGGTGAGCTTGGCCATTGTCGTGGGGCTCTTATTCCAGCACGGGAAGCGGTACAGAATTATCGTCTTCTGACAGCCA
GACAGCCTCATCGTTTCGCGCCCGCCCTTGCCATGGCGCTGAATAATCTTGCCAATCGGCTCAGCGAGCTTGGGCAGCGG
GAAGAAGCTTTGACCTTTGCCCAAGAAGCCGCCGCTCTCTACCGGCAATTGGCTGACGTCCTTCCCAATCGATTCATGCC
GGACCTCGCGGGATCGCTCAATAATCTCTCCAATCGACTGAGTGCGCTTGGACAGCGTGAGGAAGCCCTAACGGTGATGC
AGGAAAGCGTCGCTTTCTACAAAGACCTGTCGGCACACCAGCCTGAACTCTTTACCCCCGCCCTTGCGACCGCACTCAAT
AATCTCGCGAACAAACTGAACGATCTTGGCCGGCGGGACGAGGCGTTGGAGGCTGCACAGGAATCCGTCACACATTTTCG
GTTCCTCACCGCAGCGCGGCCACAAGCCTTCACGCCTCAACTTGCGATGGCCCTCAACAGTCTCTCCAATCGGCTGCGTG
ATATCGGCCAACGCGAGGAAGCCTTGACGCAGGCGCAAGAATCCGTGGCCCTTCGTCGGCGCCTGACGGCTTCGCAACCG
GATGTGTATCAGCAAGACCTCGCGGTCTCGCTCAACACCTTGGCGAATAGTCTCAGTGCCCTCAACAGACCGGAACAGGC
TTTGACAGCGACGCAAGAAGCTGTCGCGATCCGCCGCTCACTGGTCAAGACCCGGCCTGAAGTTTTTACGCAAGATCTCG
CGGCCTCACTCAACACCTTGGCCAATAATCTCAGCGCACTCGGTTACTATGAGGAGGCTCTTGTGGCGGCGGAAGAAGCC
GTCAGCCTTCGCCGGACCTTGGCCGCGGGTTACCCTGATGTTTTTATCCCTAATCTCGCCGGCTCACTCAATACTCTTGC
AAACAGGCTGAGCGATCTCGAAAGGGTCGAGGAAGCCCTTGTCGCCGCACGCGAGGCAGCGCAGCTTTATCGCGCCCTGG
CGGCCAATCGACCCGCCGCCTTTACCCATCACCTTGCTGGATCTCTCAATAATCTCGCAAACAGATTGAGCCATATCGGT
CAGCATGAATGCGCTTTGGCGCCCGCGAAAGAAGCCGTCAACTTATATCGCGACCTGGCTGAAAATCGGCCACAAACATT
TACCGCCGATCTCGCTTTGGCGCTCAATACGCTCGCCAATATCTTAAACAAGACAGGCCAGAAAGAAGAGGCTTTGGCGG
CGGCCAATCTTTATCGCACATTAGCAGCCGCGCATACTAAAGTCTTTGACCCACACCATATTGCTTCTCTCAACACATTG
ACGGAAATGATCGGACCCTTACCGTCCAATCGCGTCGAATGGCAGGATCACGGGTGA

Upstream 100 bases:

>100_bases
CGGAAAGGATCGAGGATATCGTGCCGATGATCGAACAGGCGATGACGCTCAATGCGCGGCTCGGCAAGAACAAACAGAAG
GTCGACCCGCGATTGTGACA

Downstream 100 bases:

>100_bases
GCGAAACGCAACCTATTTCGCCCCCGCTTTCATGAGTTTGTAGGTGATGGCATCAAGGAGCGCCTGGAAGGACGCCTCGA
TGATGTTGGAGGAAACCCCC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Tetratricopeptide Repeat Family; TPR Domain-Containing Protein

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MTGPQAKSLIESALSFSRQGQWSEALDKAETAVSLYRVLAEEQSSAFNPGLAEALDILANILSEIGEKEKALAFAEEALA
LRRVLADSGSDTFIADLAFSLNTYATCLGELGHCRGALIPAREAVQNYRLLTARQPHRFAPALAMALNNLANRLSELGQR
EEALTFAQEAAALYRQLADVLPNRFMPDLAGSLNNLSNRLSALGQREEALTVMQESVAFYKDLSAHQPELFTPALATALN
NLANKLNDLGRRDEALEAAQESVTHFRFLTAARPQAFTPQLAMALNSLSNRLRDIGQREEALTQAQESVALRRRLTASQP
DVYQQDLAVSLNTLANSLSALNRPEQALTATQEAVAIRRSLVKTRPEVFTQDLAASLNTLANNLSALGYYEEALVAAEEA
VSLRRTLAAGYPDVFIPNLAGSLNTLANRLSDLERVEEALVAAREAAQLYRALAANRPAAFTHHLAGSLNNLANRLSHIG
QHECALAPAKEAVNLYRDLAENRPQTFTADLALALNTLANILNKTGQKEEALAAANLYRTLAAAHTKVFDPHHIASLNTL
TEMIGPLPSNRVEWQDHG

Sequences:

>Translated_578_residues
MTGPQAKSLIESALSFSRQGQWSEALDKAETAVSLYRVLAEEQSSAFNPGLAEALDILANILSEIGEKEKALAFAEEALA
LRRVLADSGSDTFIADLAFSLNTYATCLGELGHCRGALIPAREAVQNYRLLTARQPHRFAPALAMALNNLANRLSELGQR
EEALTFAQEAAALYRQLADVLPNRFMPDLAGSLNNLSNRLSALGQREEALTVMQESVAFYKDLSAHQPELFTPALATALN
NLANKLNDLGRRDEALEAAQESVTHFRFLTAARPQAFTPQLAMALNSLSNRLRDIGQREEALTQAQESVALRRRLTASQP
DVYQQDLAVSLNTLANSLSALNRPEQALTATQEAVAIRRSLVKTRPEVFTQDLAASLNTLANNLSALGYYEEALVAAEEA
VSLRRTLAAGYPDVFIPNLAGSLNTLANRLSDLERVEEALVAAREAAQLYRALAANRPAAFTHHLAGSLNNLANRLSHIG
QHECALAPAKEAVNLYRDLAENRPQTFTADLALALNTLANILNKTGQKEEALAAANLYRTLAAAHTKVFDPHHIASLNTL
TEMIGPLPSNRVEWQDHG
>Mature_577_residues
TGPQAKSLIESALSFSRQGQWSEALDKAETAVSLYRVLAEEQSSAFNPGLAEALDILANILSEIGEKEKALAFAEEALAL
RRVLADSGSDTFIADLAFSLNTYATCLGELGHCRGALIPAREAVQNYRLLTARQPHRFAPALAMALNNLANRLSELGQRE
EALTFAQEAAALYRQLADVLPNRFMPDLAGSLNNLSNRLSALGQREEALTVMQESVAFYKDLSAHQPELFTPALATALNN
LANKLNDLGRRDEALEAAQESVTHFRFLTAARPQAFTPQLAMALNSLSNRLRDIGQREEALTQAQESVALRRRLTASQPD
VYQQDLAVSLNTLANSLSALNRPEQALTATQEAVAIRRSLVKTRPEVFTQDLAASLNTLANNLSALGYYEEALVAAEEAV
SLRRTLAAGYPDVFIPNLAGSLNTLANRLSDLERVEEALVAAREAAQLYRALAANRPAAFTHHLAGSLNNLANRLSHIGQ
HECALAPAKEAVNLYRDLAENRPQTFTADLALALNTLANILNKTGQKEEALAAANLYRTLAAAHTKVFDPHHIASLNTLT
EMIGPLPSNRVEWQDHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62807; Mature: 62675

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPQAKSLIESALSFSRQGQWSEALDKAETAVSLYRVLAEEQSSAFNPGLAEALDILAN
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILSEIGEKEKALAFAEEALALRRVLADSGSDTFIADLAFSLNTYATCLGELGHCRGALIP
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AREAVQNYRLLTARQPHRFAPALAMALNNLANRLSELGQREEALTFAQEAAALYRQLADV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPNRFMPDLAGSLNNLSNRLSALGQREEALTVMQESVAFYKDLSAHQPELFTPALATALN
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NLANKLNDLGRRDEALEAAQESVTHFRFLTAARPQAFTPQLAMALNSLSNRLRDIGQREE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALTQAQESVALRRRLTASQPDVYQQDLAVSLNTLANSLSALNRPEQALTATQEAVAIRRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LVKTRPEVFTQDLAASLNTLANNLSALGYYEEALVAAEEAVSLRRTLAAGYPDVFIPNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
GSLNTLANRLSDLERVEEALVAAREAAQLYRALAANRPAAFTHHLAGSLNNLANRLSHIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
QHECALAPAKEAVNLYRDLAENRPQTFTADLALALNTLANILNKTGQKEEALAAANLYRT
CHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAAAHTKVFDPHHIASLNTLTEMIGPLPSNRVEWQDHG
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGPQAKSLIESALSFSRQGQWSEALDKAETAVSLYRVLAEEQSSAFNPGLAEALDILAN
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ILSEIGEKEKALAFAEEALALRRVLADSGSDTFIADLAFSLNTYATCLGELGHCRGALIP
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AREAVQNYRLLTARQPHRFAPALAMALNNLANRLSELGQREEALTFAQEAAALYRQLADV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPNRFMPDLAGSLNNLSNRLSALGQREEALTVMQESVAFYKDLSAHQPELFTPALATALN
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
NLANKLNDLGRRDEALEAAQESVTHFRFLTAARPQAFTPQLAMALNSLSNRLRDIGQREE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALTQAQESVALRRRLTASQPDVYQQDLAVSLNTLANSLSALNRPEQALTATQEAVAIRRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LVKTRPEVFTQDLAASLNTLANNLSALGYYEEALVAAEEAVSLRRTLAAGYPDVFIPNLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
GSLNTLANRLSDLERVEEALVAAREAAQLYRALAANRPAAFTHHLAGSLNNLANRLSHIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
QHECALAPAKEAVNLYRDLAENRPQTFTADLALALNTLANILNKTGQKEEALAAANLYRT
CHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAAAHTKVFDPHHIASLNTLTEMIGPLPSNRVEWQDHG
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA