Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is ydzA [H]

Identifier: 182678856

GI number: 182678856

Start: 2153630

End: 2153968

Strand: Direct

Name: ydzA [H]

Synonym: Bind_1889

Alternate gene names: 182678856

Gene position: 2153630-2153968 (Clockwise)

Preceding gene: 182678855

Following gene: 182678857

Centisome position: 51.64

GC content: 58.11

Gene sequence:

>339_bases
ATGGCCGCTCCCCTCGATAAAAAGGCTGAAGAGCGAAGGGATTTACAGCTCATGCAATGGGCTTCGCTTCTCGAAGGCAC
AACCCTCGTCCTTCTCGTTTTCATCGCTGTGCCGCTCAAGCACCTAGGCGGCTGTCCGATCGCGACCTCCATCATGGGCC
CGATCCACGGCCTGGCCTTTCTCTTCTATGTCTGGATGATGTTTCGGCTCACCGCTTCTGCGGATTGGTCGAAGGGCGAG
ATGGCCCGCCTGCTCATTGCAGCCCTTATTCCCTTCGGCGCTTTCGCGAACGAGCGTATCCTGCGCAAAAAAGCCGCCGA
AATCGACGCGACAGCCTGA

Upstream 100 bases:

>100_bases
CAAACATCGAGCGTCAACGCTCTCGCCGCATTACAGACTGACTTCGCCGAATTGAAAACCGGCTGACTAAAATCGAAACC
GTCTTGAAGGAAGTCGAATA

Downstream 100 bases:

>100_bases
GCTCTTCATGGACTATTATCTTTGGTTCAAGGCGCTGCATATTGCGGCCGTGGTGACATGGATCGGCGGCATGCTGGTCA
TGGGCATGGCTCTTTCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAAPLDKKAEERRDLQLMQWASLLEGTTLVLLVFIAVPLKHLGGCPIATSIMGPIHGLAFLFYVWMMFRLTASADWSKGE
MARLLIAALIPFGAFANERILRKKAAEIDATA

Sequences:

>Translated_112_residues
MAAPLDKKAEERRDLQLMQWASLLEGTTLVLLVFIAVPLKHLGGCPIATSIMGPIHGLAFLFYVWMMFRLTASADWSKGE
MARLLIAALIPFGAFANERILRKKAAEIDATA
>Mature_111_residues
AAPLDKKAEERRDLQLMQWASLLEGTTLVLLVFIAVPLKHLGGCPIATSIMGPIHGLAFLFYVWMMFRLTASADWSKGEM
ARLLIAALIPFGAFANERILRKKAAEIDATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12343; Mature: 12212

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPLDKKAEERRDLQLMQWASLLEGTTLVLLVFIAVPLKHLGGCPIATSIMGPIHGLAF
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LFYVWMMFRLTASADWSKGEMARLLIAALIPFGAFANERILRKKAAEIDATA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAPLDKKAEERRDLQLMQWASLLEGTTLVLLVFIAVPLKHLGGCPIATSIMGPIHGLAF
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LFYVWMMFRLTASADWSKGEMARLLIAALIPFGAFANERILRKKAAEIDATA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]