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The map label for this gene is omp2b [H]

Identifier: 182678840

GI number: 182678840

Start: 2135091

End: 2136641

Strand: Reverse

Name: omp2b [H]

Synonym: Bind_1873

Alternate gene names: 182678840

Gene position: 2136641-2135091 (Counterclockwise)

Preceding gene: 182678844

Following gene: 182678837

Centisome position: 51.24

GC content: 56.8

Gene sequence:

>1551_bases
ATGGCCAAGCTGACGTTGACTCACTGGTTCGTGCGTGGACTGATGGGTTTGGGCGCTTTGGGCGCCGGTCTTGGTTTGAG
TGAGCCTGCCGCTGCCGCGGATCTTCCGTGGAATAAAGCAGCGCCTGTCGAATATGTGCGCGTTTGCGATGCCTATGGTG
CGGGCTTTTTCTATCTGCCCGGCACAGAGACATGTCTGAAAGTTGGCGGCCTCGTTCTCGCCGAATATCGCGGCTTCGAC
GCGTCCTATTCGATCAACGGTGGCGCTTTCTACGCTAATGGCGTCGCCCGCCCGGCGGGAGGTTTTGTCCCGAGCCCGGC
ACAATATACCAATGCCCGTACCCGTGATGCTTATGGTTTTGGCGCCTTGGGACGCATCGAACTGGACGCGCGCACGAAAT
CGGAATGGGGTACGGTGCGGACCTTTCTGCGCGTCGATGCTTATTATGGCTCGAGCGACAATGCTGCGACCGGTAGCGGT
GGGCAGCTCGGCAATAGCTGGAACGGGACAGCCGGAACCACCGCTCCGCGCGAGACAACCATCGTCAACAAAGCCTTTAT
CCAATTCGCCGGTTTGACAGCGGGTCGCGCCCAATCGCTCTTCGATTTCTATGCCGATGCCTACAACTTCGCGAACTTGC
GTGGTTCCAATGCAACGGTTGCTCTTTTGTCCTATACGGCGACATTCGGTGACGGATGGTCGGCGTCCCTCTCCTTAGAA
GATCAGCCTTCTCGCCGCGCCGCGATTGGCAGCACAGTTGCCGGCTCACAGGCCATGCCCGGCGGGACGCGTGTCCCCGA
TATCGTCGGCAACGTCCGTCTCGATCAACCTTGGGGTGCTGTCCAGTTTTCGGCGGCGGCGCATCAGGTGCGCGCGACGC
TCTTTCCGGCTACCGCGCTCTCGGTCCCGCCGACAACCTATGCCTTCCCCAATAACACCAGCAATTCCTATGGATTTGCT
CTGCAAGGCGGCGTCCAGCTCAATGCTGATGTGATTGCCAAGGGCGATAAATTATGGCTGCAAGCGGCCTATGAAAAAGG
TGCCTTCAGCTATATTGCAGGCAATAATATTTCCTATGCTTATGGTGCGGTGGGCCAAAATCGTTATATGGGCTCCGGTA
TTACATCCGAAGATTATTCGTTCGGATGGAATCCGCAGATCAATTCTGATTGCGTCTTCACCGGAGCCGGCTCCTGCGAG
CAGCAATGGGGATGGGCCTTTGTCGGCGCCTACAAGCATTATTGGATTCCGACCTTGAGCTCCGCTGTGTTCGGATCTTA
TGCGGAAGTTCATTATTCGGACAATGCGGTGGCAGGTGTCGGTGGCGCCGTTGGTGTCTCCAATCTTAAGGAAGGCCGTG
TCGGTACCAACTTGATCTGGACGCCGTTGCGTGGCTTCGATATCGGTGCCGAATTCATGTATATCCACCTGGATCAGACG
CGTCCGGTTGGCTTGGCTTCGGATACGACCTTGAGAGCAGCGGGCCTGCCAGCCTTCAAGAGCAATAATAATGAATATGA
AACCCGTATTCGCGTGCAGCGTGCTTTCTGA

Upstream 100 bases:

>100_bases
GATGAGGGGGTGCGAAAAAGTGTCGCGCAGCCTTAATCTTAACAATGGGGAGCGGTCTGTCCTCGGGGGGGGCTCGAACG
AACATCTTCTCGGCACAAGC

Downstream 100 bases:

>100_bases
TCAGCGAGACGCTTGCTCAAAGAGCGCTTGATAGGATCAAGGCCTCTTCCAATCGCGATTGGAAAAGGCCTTTTTTATTG
TTCCGCCCGGCATGTTCCGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MAKLTLTHWFVRGLMGLGALGAGLGLSEPAAAADLPWNKAAPVEYVRVCDAYGAGFFYLPGTETCLKVGGLVLAEYRGFD
ASYSINGGAFYANGVARPAGGFVPSPAQYTNARTRDAYGFGALGRIELDARTKSEWGTVRTFLRVDAYYGSSDNAATGSG
GQLGNSWNGTAGTTAPRETTIVNKAFIQFAGLTAGRAQSLFDFYADAYNFANLRGSNATVALLSYTATFGDGWSASLSLE
DQPSRRAAIGSTVAGSQAMPGGTRVPDIVGNVRLDQPWGAVQFSAAAHQVRATLFPATALSVPPTTYAFPNNTSNSYGFA
LQGGVQLNADVIAKGDKLWLQAAYEKGAFSYIAGNNISYAYGAVGQNRYMGSGITSEDYSFGWNPQINSDCVFTGAGSCE
QQWGWAFVGAYKHYWIPTLSSAVFGSYAEVHYSDNAVAGVGGAVGVSNLKEGRVGTNLIWTPLRGFDIGAEFMYIHLDQT
RPVGLASDTTLRAAGLPAFKSNNNEYETRIRVQRAF

Sequences:

>Translated_516_residues
MAKLTLTHWFVRGLMGLGALGAGLGLSEPAAAADLPWNKAAPVEYVRVCDAYGAGFFYLPGTETCLKVGGLVLAEYRGFD
ASYSINGGAFYANGVARPAGGFVPSPAQYTNARTRDAYGFGALGRIELDARTKSEWGTVRTFLRVDAYYGSSDNAATGSG
GQLGNSWNGTAGTTAPRETTIVNKAFIQFAGLTAGRAQSLFDFYADAYNFANLRGSNATVALLSYTATFGDGWSASLSLE
DQPSRRAAIGSTVAGSQAMPGGTRVPDIVGNVRLDQPWGAVQFSAAAHQVRATLFPATALSVPPTTYAFPNNTSNSYGFA
LQGGVQLNADVIAKGDKLWLQAAYEKGAFSYIAGNNISYAYGAVGQNRYMGSGITSEDYSFGWNPQINSDCVFTGAGSCE
QQWGWAFVGAYKHYWIPTLSSAVFGSYAEVHYSDNAVAGVGGAVGVSNLKEGRVGTNLIWTPLRGFDIGAEFMYIHLDQT
RPVGLASDTTLRAAGLPAFKSNNNEYETRIRVQRAF
>Mature_515_residues
AKLTLTHWFVRGLMGLGALGAGLGLSEPAAAADLPWNKAAPVEYVRVCDAYGAGFFYLPGTETCLKVGGLVLAEYRGFDA
SYSINGGAFYANGVARPAGGFVPSPAQYTNARTRDAYGFGALGRIELDARTKSEWGTVRTFLRVDAYYGSSDNAATGSGG
QLGNSWNGTAGTTAPRETTIVNKAFIQFAGLTAGRAQSLFDFYADAYNFANLRGSNATVALLSYTATFGDGWSASLSLED
QPSRRAAIGSTVAGSQAMPGGTRVPDIVGNVRLDQPWGAVQFSAAAHQVRATLFPATALSVPPTTYAFPNNTSNSYGFAL
QGGVQLNADVIAKGDKLWLQAAYEKGAFSYIAGNNISYAYGAVGQNRYMGSGITSEDYSFGWNPQINSDCVFTGAGSCEQ
QWGWAFVGAYKHYWIPTLSSAVFGSYAEVHYSDNAVAGVGGAVGVSNLKEGRVGTNLIWTPLRGFDIGAEFMYIHLDQTR
PVGLASDTTLRAAGLPAFKSNNNEYETRIRVQRAF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 54719; Mature: 54588

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLTLTHWFVRGLMGLGALGAGLGLSEPAAAADLPWNKAAPVEYVRVCDAYGAGFFYLP
CCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECC
GTETCLKVGGLVLAEYRGFDASYSINGGAFYANGVARPAGGFVPSPAQYTNARTRDAYGF
CCHHHHHHCCEEEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCC
GALGRIELDARTKSEWGTVRTFLRVDAYYGSSDNAATGSGGQLGNSWNGTAGTTAPRETT
CCCEEEEECCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
IVNKAFIQFAGLTAGRAQSLFDFYADAYNFANLRGSNATVALLSYTATFGDGWSASLSLE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCEEEEEEC
DQPSRRAAIGSTVAGSQAMPGGTRVPDIVGNVRLDQPWGAVQFSAAAHQVRATLFPATAL
CCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCEEEHHHHHHHHHEEECCEEE
SVPPTTYAFPNNTSNSYGFALQGGVQLNADVIAKGDKLWLQAAYEKGAFSYIAGNNISYA
CCCCCEEECCCCCCCCCCEEEECCEEECCEEEECCCEEEEEEHHCCCCEEEEECCCCEEE
YGAVGQNRYMGSGITSEDYSFGWNPQINSDCVFTGAGSCEQQWGWAFVGAYKHYWIPTLS
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHCCHHHH
SAVFGSYAEVHYSDNAVAGVGGAVGVSNLKEGRVGTNLIWTPLRGFDIGAEFMYIHLDQT
HHHHCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCC
RPVGLASDTTLRAAGLPAFKSNNNEYETRIRVQRAF
CCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
AKLTLTHWFVRGLMGLGALGAGLGLSEPAAAADLPWNKAAPVEYVRVCDAYGAGFFYLP
CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECC
GTETCLKVGGLVLAEYRGFDASYSINGGAFYANGVARPAGGFVPSPAQYTNARTRDAYGF
CCHHHHHHCCEEEEEECCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCC
GALGRIELDARTKSEWGTVRTFLRVDAYYGSSDNAATGSGGQLGNSWNGTAGTTAPRETT
CCCEEEEECCCCCCCHHHEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
IVNKAFIQFAGLTAGRAQSLFDFYADAYNFANLRGSNATVALLSYTATFGDGWSASLSLE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEECCCCCEEEEEEC
DQPSRRAAIGSTVAGSQAMPGGTRVPDIVGNVRLDQPWGAVQFSAAAHQVRATLFPATAL
CCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCEECCCCCCEEEHHHHHHHHHEEECCEEE
SVPPTTYAFPNNTSNSYGFALQGGVQLNADVIAKGDKLWLQAAYEKGAFSYIAGNNISYA
CCCCCEEECCCCCCCCCCEEEECCEEECCEEEECCCEEEEEEHHCCCCEEEEECCCCEEE
YGAVGQNRYMGSGITSEDYSFGWNPQINSDCVFTGAGSCEQQWGWAFVGAYKHYWIPTLS
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECHHHHCCHHHH
SAVFGSYAEVHYSDNAVAGVGGAVGVSNLKEGRVGTNLIWTPLRGFDIGAEFMYIHLDQT
HHHHCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCC
RPVGLASDTTLRAAGLPAFKSNNNEYETRIRVQRAF
CCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]