| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678797
Identifier: 182678797
GI number: 182678797
Start: 2077073
End: 2077534
Strand: Reverse
Name: 182678797
Synonym: Bind_1827
Alternate gene names: NA
Gene position: 2077534-2077073 (Counterclockwise)
Preceding gene: 182678798
Following gene: 182678796
Centisome position: 49.82
GC content: 63.64
Gene sequence:
>462_bases ATGCTGCCGATCAGCCAACCGCTCGGGATCGATCAGTGCAACTGCTTCGCCATGCGGAAGGCGAGCCGACAGATCACCCG TTTCTACGATGCCATGCTTGAGCCGGCGGGTCTGCGCATCACGCAATTCCTCATCCTCGCGGCCCTGAACGAGGTGGGGA GCGCCGCGGTCAATGCCCTCGCCGAACGGCTCGACATCGAGCGGACGGCGATGGGGAAAATGCTTGGCTTTCTGGAACGC GATGGCCTGATCAGCATCCGGCCGTCACCCACTGACGGGCGGAGCCGCCTCGTCGAACTCACCGAGGAGGGTCGGCGTCG TCACGCCCAGGCGTCTCCTCTCTGGCGCGAAGCACAACGGCAATTCGAGCAATTGAACGGCGCGGAAAATGTCGCGGAGC TGCGGCAGGGACTGAGACAGATGGTCGTCGGCGACGTGGCAACGAGTTCGCGGGAAGATTGA
Upstream 100 bases:
>100_bases GACGCCCGCGCTGTCGGTGCCGGCTTTCATCGAGAAGTACCGCAGCGCCTTCGCGTGACGCGCGGGGTTGGGTGAACAAT GACATTGAAAGGGACAAGAG
Downstream 100 bases:
>100_bases GTTTCCTGCCGCTCTCACTCCGCCCAGCCGCGGTCAATCCGCATGACGATGCTAGCGGCTAAAGCATGCGACTACATGAA GGGAAGAAGATTATGACCAC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; MarR Family Regulatory Protein; Organic Hydroperoxide Resistance Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein Marr Family; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLPISQPLGIDQCNCFAMRKASRQITRFYDAMLEPAGLRITQFLILAALNEVGSAAVNALAERLDIERTAMGKMLGFLER DGLISIRPSPTDGRSRLVELTEEGRRRHAQASPLWREAQRQFEQLNGAENVAELRQGLRQMVVGDVATSSRED
Sequences:
>Translated_153_residues MLPISQPLGIDQCNCFAMRKASRQITRFYDAMLEPAGLRITQFLILAALNEVGSAAVNALAERLDIERTAMGKMLGFLER DGLISIRPSPTDGRSRLVELTEEGRRRHAQASPLWREAQRQFEQLNGAENVAELRQGLRQMVVGDVATSSRED >Mature_153_residues MLPISQPLGIDQCNCFAMRKASRQITRFYDAMLEPAGLRITQFLILAALNEVGSAAVNALAERLDIERTAMGKMLGFLER DGLISIRPSPTDGRSRLVELTEEGRRRHAQASPLWREAQRQFEQLNGAENVAELRQGLRQMVVGDVATSSRED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17083; Mature: 17083
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPISQPLGIDQCNCFAMRKASRQITRFYDAMLEPAGLRITQFLILAALNEVGSAAVNAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AERLDIERTAMGKMLGFLERDGLISIRPSPTDGRSRLVELTEEGRRRHAQASPLWREAQR HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH QFEQLNGAENVAELRQGLRQMVVGDVATSSRED HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLPISQPLGIDQCNCFAMRKASRQITRFYDAMLEPAGLRITQFLILAALNEVGSAAVNAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AERLDIERTAMGKMLGFLERDGLISIRPSPTDGRSRLVELTEEGRRRHAQASPLWREAQR HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH QFEQLNGAENVAELRQGLRQMVVGDVATSSRED HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA