Click here to switch to the map view.

The map label for this gene is mdoD [H]

Identifier: 182678775

GI number: 182678775

Start: 2046342

End: 2047952

Strand: Direct

Name: mdoD [H]

Synonym: Bind_1804

Alternate gene names: 182678775

Gene position: 2046342-2047952 (Clockwise)

Preceding gene: 182678769

Following gene: 182678776

Centisome position: 49.07

GC content: 60.46

Gene sequence:

>1611_bases
ATGATTGAACGCAGGGATTTCCTGAAATTCACCCTTGGCGGCGTCGCCATGGGACAATTGGCTCCAGGCCTCGGCCGAGA
CGGGAAGAATACTTCACCTTTTACTCTCGCCAGCAGCGCCAACGCCGAGGAAGCGACAACACCAGCTCCCAAAAGCCCAT
CCTCCGGCTTTACCCTCGGCGAGGCCAAGCCCTTCGAGCCCGCCAATGTCACGGAGGCCGCCCGCGCGCTTGCCCGTCAA
GCCTATAAGCCGCTCCGTCAGCCGCTGCCGGATGTTTTCGCTGCGCTCAGCCATGATCAATACGGCACCATCTATGCGAA
GCCGGGCACGGCCCTTTGGGCGGGAGACAATCTCGGCTTCGCGATCGAGCCTCTGCATCGCGGCTTTATCTTCTCCGACC
CCATGGAGATCAATATTGTCGAGCATGGCGCCGCACGCCGCCTCGTCTATGATCAGGCTCAATTCGCCTTTGGCAAACTC
GCCGTGCCGAACGCGATGGGAGATATTGGTTTTTCCGGGTTTCGGATCTTGGTGCCGCAAGATGCCCAGAATTTCGGGGC
GCTCGCGACCTTTCAAGGCGCCAGTTTTTTCCATGCGATAGCCCGCGGGCAGAGCGAGGGCGTGACCGCGCGAGCCCTAT
CGATCAAAACCGCCGATCCGCGCGGCGAGGAATTTCCGGCGATCCGCGCCATCTGGATCGAAACCCCGACCCTCGCCGAA
AATGCCCTGACGCTCCATGCCCTGATCGATTCAGAAAGCGTTGCCGGCGCCTATCGCTTCACCCTGCATCCCAGTGAAGC
GACGATCATCGATACGGAATGCACGCTTTTTGCCCGTACGAATGTCGACCGTTTCGGCCTTGCCACCATGACCGGTGCGC
ATCTTCTCGCGCCCGTCGACCAACGCCATATGGACGATCTGCGACCACAAGTCAGCGAAGTCGGCGGCCTTGCGATGCTG
TCCGGCCGAGGCGAATGGCTGTGGCGGCCCGTGGCCAATCGCGAAACCTTGCAGATTTCCGTATTCACGGACGAAAAACC
GCATGGTTTTGGTTTTTTGCAGCGCGACCGTGCTTTTGACGCTTTTCAGGATGATTTTCAGCATTGGGAAACACGCCCCT
CCCTGTGGATCGAACCGATCGGCGAATGGGCTGCCGGCGCCCTGCAATTGATCGAAATCCCCTCGGATGCCGAGATTAAC
GACAACATCCTTGCCTTTTGGCAGCCGCGTCAGGCCTTGGCACCGGGCAGCGAGACCTCCTTCGCCTACCGGCAATTCTG
GTGCTGGACTCCCCCCGTCAGTCCTCCCCTGGCGATCACCACGGCTTCGCGTCAAGGGCATGGCTCAGCGGCGCGGCGGC
GCCGTTTCCTTGTCCAGTTCACAGGCCCCGGCCTCGCCGATCCGCAAAAGATCAAGGACGTGAAACCAAATCTGACCGCC
ACGCCGGGCACGATCCTCGACATGCGCACATTCGCGCTGCCCGAACGGCAATCCTATCGCATTGTCTTCGAACTGGATCC
CGGCACTGAAACCACTTCGGAAATGCGCCTCGTGCTTGAGGTTGCGGGAGTTCCGATCAGCGAGACCTGGCTTTACCGAT
GGACGCCCTGA

Upstream 100 bases:

>100_bases
TCGGCCGCAAAATTGCCGAGTGAAAAAGGATCATATCCTTGCCGTTTATCGACTATAAAGAGACAGAATCAGCCTCTTCC
AGCCTTAGTTTATCGCACCC

Downstream 100 bases:

>100_bases
ACACATTCACCGACCACGCTCATCTGGCCGATCAAACGTTGTGGCAAGATCTCGAGGCTGCCGAGGGAAAAGAGGCGATC
CTTTCTTCTCCCTTCGCGGC

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MIERRDFLKFTLGGVAMGQLAPGLGRDGKNTSPFTLASSANAEEATTPAPKSPSSGFTLGEAKPFEPANVTEAARALARQ
AYKPLRQPLPDVFAALSHDQYGTIYAKPGTALWAGDNLGFAIEPLHRGFIFSDPMEINIVEHGAARRLVYDQAQFAFGKL
AVPNAMGDIGFSGFRILVPQDAQNFGALATFQGASFFHAIARGQSEGVTARALSIKTADPRGEEFPAIRAIWIETPTLAE
NALTLHALIDSESVAGAYRFTLHPSEATIIDTECTLFARTNVDRFGLATMTGAHLLAPVDQRHMDDLRPQVSEVGGLAML
SGRGEWLWRPVANRETLQISVFTDEKPHGFGFLQRDRAFDAFQDDFQHWETRPSLWIEPIGEWAAGALQLIEIPSDAEIN
DNILAFWQPRQALAPGSETSFAYRQFWCWTPPVSPPLAITTASRQGHGSAARRRRFLVQFTGPGLADPQKIKDVKPNLTA
TPGTILDMRTFALPERQSYRIVFELDPGTETTSEMRLVLEVAGVPISETWLYRWTP

Sequences:

>Translated_536_residues
MIERRDFLKFTLGGVAMGQLAPGLGRDGKNTSPFTLASSANAEEATTPAPKSPSSGFTLGEAKPFEPANVTEAARALARQ
AYKPLRQPLPDVFAALSHDQYGTIYAKPGTALWAGDNLGFAIEPLHRGFIFSDPMEINIVEHGAARRLVYDQAQFAFGKL
AVPNAMGDIGFSGFRILVPQDAQNFGALATFQGASFFHAIARGQSEGVTARALSIKTADPRGEEFPAIRAIWIETPTLAE
NALTLHALIDSESVAGAYRFTLHPSEATIIDTECTLFARTNVDRFGLATMTGAHLLAPVDQRHMDDLRPQVSEVGGLAML
SGRGEWLWRPVANRETLQISVFTDEKPHGFGFLQRDRAFDAFQDDFQHWETRPSLWIEPIGEWAAGALQLIEIPSDAEIN
DNILAFWQPRQALAPGSETSFAYRQFWCWTPPVSPPLAITTASRQGHGSAARRRRFLVQFTGPGLADPQKIKDVKPNLTA
TPGTILDMRTFALPERQSYRIVFELDPGTETTSEMRLVLEVAGVPISETWLYRWTP
>Mature_536_residues
MIERRDFLKFTLGGVAMGQLAPGLGRDGKNTSPFTLASSANAEEATTPAPKSPSSGFTLGEAKPFEPANVTEAARALARQ
AYKPLRQPLPDVFAALSHDQYGTIYAKPGTALWAGDNLGFAIEPLHRGFIFSDPMEINIVEHGAARRLVYDQAQFAFGKL
AVPNAMGDIGFSGFRILVPQDAQNFGALATFQGASFFHAIARGQSEGVTARALSIKTADPRGEEFPAIRAIWIETPTLAE
NALTLHALIDSESVAGAYRFTLHPSEATIIDTECTLFARTNVDRFGLATMTGAHLLAPVDQRHMDDLRPQVSEVGGLAML
SGRGEWLWRPVANRETLQISVFTDEKPHGFGFLQRDRAFDAFQDDFQHWETRPSLWIEPIGEWAAGALQLIEIPSDAEIN
DNILAFWQPRQALAPGSETSFAYRQFWCWTPPVSPPLAITTASRQGHGSAARRRRFLVQFTGPGLADPQKIKDVKPNLTA
TPGTILDMRTFALPERQSYRIVFELDPGTETTSEMRLVLEVAGVPISETWLYRWTP

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI1787286, Length=487, Percent_Identity=33.4702258726899, Blast_Score=290, Evalue=2e-79,
Organism=Escherichia coli, GI145693128, Length=502, Percent_Identity=33.8645418326693, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 58907; Mature: 58907

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERRDFLKFTLGGVAMGQLAPGLGRDGKNTSPFTLASSANAEEATTPAPKSPSSGFTLG
CCCCCCHHEEECCCEEHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECC
EAKPFEPANVTEAARALARQAYKPLRQPLPDVFAALSHDQYGTIYAKPGTALWAGDNLGF
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCE
AIEPLHRGFIFSDPMEINIVEHGAARRLVYDQAQFAFGKLAVPNAMGDIGFSGFRILVPQ
EECHHHCCEEECCCEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEECC
DAQNFGALATFQGASFFHAIARGQSEGVTARALSIKTADPRGEEFPAIRAIWIETPTLAE
CCCCCCCEEEECCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCC
NALTLHALIDSESVAGAYRFTLHPSEATIIDTECTLFARTNVDRFGLATMTGAHLLAPVD
CCEEEEEEECCCCCCCEEEEEECCCCCEEEECCEEEEEECCCCHHCHHHHCCCCEECCCC
QRHMDDLRPQVSEVGGLAMLSGRGEWLWRPVANRETLQISVFTDEKPHGFGFLQRDRAFD
HHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEECCCCHH
AFQDDFQHWETRPSLWIEPIGEWAAGALQLIEIPSDAEINDNILAFWQPRQALAPGSETS
HHHHHHHHHCCCCCEEEEECCCHHCCCEEEEECCCCCCCCCCEEEEECCHHHCCCCCCCC
FAYRQFWCWTPPVSPPLAITTASRQGHGSAARRRRFLVQFTGPGLADPQKIKDVKPNLTA
EEEEEEEEECCCCCCCEEEEECCCCCCCHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCC
TPGTILDMRTFALPERQSYRIVFELDPGTETTSEMRLVLEVAGVPISETWLYRWTP
CCCCEEEEHHHCCCCCCCEEEEEEECCCCCCHHHHEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure
MIERRDFLKFTLGGVAMGQLAPGLGRDGKNTSPFTLASSANAEEATTPAPKSPSSGFTLG
CCCCCCHHEEECCCEEHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECC
EAKPFEPANVTEAARALARQAYKPLRQPLPDVFAALSHDQYGTIYAKPGTALWAGDNLGF
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCE
AIEPLHRGFIFSDPMEINIVEHGAARRLVYDQAQFAFGKLAVPNAMGDIGFSGFRILVPQ
EECHHHCCEEECCCEEEEEECCCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCEEEEECC
DAQNFGALATFQGASFFHAIARGQSEGVTARALSIKTADPRGEEFPAIRAIWIETPTLAE
CCCCCCCEEEECCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCC
NALTLHALIDSESVAGAYRFTLHPSEATIIDTECTLFARTNVDRFGLATMTGAHLLAPVD
CCEEEEEEECCCCCCCEEEEEECCCCCEEEECCEEEEEECCCCHHCHHHHCCCCEECCCC
QRHMDDLRPQVSEVGGLAMLSGRGEWLWRPVANRETLQISVFTDEKPHGFGFLQRDRAFD
HHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEECCCCHH
AFQDDFQHWETRPSLWIEPIGEWAAGALQLIEIPSDAEINDNILAFWQPRQALAPGSETS
HHHHHHHHHCCCCCEEEEECCCHHCCCEEEEECCCCCCCCCCEEEEECCHHHCCCCCCCC
FAYRQFWCWTPPVSPPLAITTASRQGHGSAARRRRFLVQFTGPGLADPQKIKDVKPNLTA
EEEEEEEEECCCCCCCEEEEECCCCCCCHHHHCCEEEEEECCCCCCCHHHHHCCCCCCCC
TPGTILDMRTFALPERQSYRIVFELDPGTETTSEMRLVLEVAGVPISETWLYRWTP
CCCCEEEEHHHCCCCCCCEEEEEEECCCCCCHHHHEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA