Click here to switch to the map view.

The map label for this gene is yhiX [C]

Identifier: 182678732

GI number: 182678732

Start: 1993646

End: 1994662

Strand: Direct

Name: yhiX [C]

Synonym: Bind_1759

Alternate gene names: 182678732

Gene position: 1993646-1994662 (Clockwise)

Preceding gene: 182678713

Following gene: 182678735

Centisome position: 47.81

GC content: 49.95

Gene sequence:

>1017_bases
TTGAACCGTCGGAATTTCGTCCGCAGCATTACCAGCATGCGGCTCCTCGCCGAACTCGGCCATGACCATGGGCTTTCCAT
GCATACCTGTCTTGAGGGAACAGGTGTTCGACAACGCGATCTTTCCGACCCTTTGGGAATAGTCTCGGCTGAGCAAGAGC
TTCAGCTCATCAGAAATTTGTGGGCGCACAGAGGCAATTGCCCAGCTTTAGGGACACAGGCCGGTGCGCGCTATCATTTC
ACGGCCTATGGAATGCTTGGTTTCGCTATGGTGAGCAGCCCCACCTTACAGAGCGCATTCGATATTTCGGTCAAATATTC
TCAACTCACCTTTGCGTTCTCGCATTTCAAGCTGAAAGAATCAGAACATGAATCGAATATAATCGTTGACACGTCTGACG
TTCCGGAAGCACTGCGTCAGTTCATCACCGAACGCGATATTGCGGCACTATTGACTGTGCAGCGCGATCTTTTTCCATCG
CAACCAGTCTTGTATAATCTTTATTTTTCCTTCCCAAGGCCTGCGCGTTCTGATCACTACGAGGCCATCTATGGTGTCAA
GCCGATTTTCGGATGCAAAGAGACATTCGCTGAGCTCAATAGAAAAGCTTTGGCACAACCTTTACCGCAGGCAAACGAGC
TCGCTCTAAAATCGGCCGAGGAACAATGCCAATTGGTCCTTGAACGCCGGTTATCGGGGACAGGATTGGCTGTCAAAGTA
AGGGATCGGCTCCTTCATGGAGGTGTCAACTTGCCCGATATGAAAGACGTTGCCAAAGATCTTTGTGTGACGCCACGCAC
TTTGCACCGTCATCTCGAAGAGGAAGGGGTGACATTTCTGGAATTACGTGACGAAGTTCGTCTTACCCTGGCTGAAAATC
TGCTACAGAACCGCAACCTTCTGGTTAAGGATATTGCTTCTCGCTTAGGCTATTCCAGCGCAACATCCTTCATCAGCGCG
TTCAGGCGATGGAAAGGCATGACGCCGCTTGTGTATAGGAACAGATTTCTATCGTAA

Upstream 100 bases:

>100_bases
TCCCGTAATTCATGAGAATTATGCTAGCGCCAAAAAAATTTGAGCCGTATAGTCTGGGAAGACAAAAAATCAAGAAAAGA
AGACATAAAGGGAGGCAGCC

Downstream 100 bases:

>100_bases
TTCATTTTCTCCGGCCTGTCGCAATCTCCTGGTGCCCGCGCTATCATCTCAACGATGAGGATCTGGAGAAGAGGCTCCCC
GTGGGTCAGTGCGCCGTGAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNRRNFVRSITSMRLLAELGHDHGLSMHTCLEGTGVRQRDLSDPLGIVSAEQELQLIRNLWAHRGNCPALGTQAGARYHF
TAYGMLGFAMVSSPTLQSAFDISVKYSQLTFAFSHFKLKESEHESNIIVDTSDVPEALRQFITERDIAALLTVQRDLFPS
QPVLYNLYFSFPRPARSDHYEAIYGVKPIFGCKETFAELNRKALAQPLPQANELALKSAEEQCQLVLERRLSGTGLAVKV
RDRLLHGGVNLPDMKDVAKDLCVTPRTLHRHLEEEGVTFLELRDEVRLTLAENLLQNRNLLVKDIASRLGYSSATSFISA
FRRWKGMTPLVYRNRFLS

Sequences:

>Translated_338_residues
MNRRNFVRSITSMRLLAELGHDHGLSMHTCLEGTGVRQRDLSDPLGIVSAEQELQLIRNLWAHRGNCPALGTQAGARYHF
TAYGMLGFAMVSSPTLQSAFDISVKYSQLTFAFSHFKLKESEHESNIIVDTSDVPEALRQFITERDIAALLTVQRDLFPS
QPVLYNLYFSFPRPARSDHYEAIYGVKPIFGCKETFAELNRKALAQPLPQANELALKSAEEQCQLVLERRLSGTGLAVKV
RDRLLHGGVNLPDMKDVAKDLCVTPRTLHRHLEEEGVTFLELRDEVRLTLAENLLQNRNLLVKDIASRLGYSSATSFISA
FRRWKGMTPLVYRNRFLS
>Mature_338_residues
MNRRNFVRSITSMRLLAELGHDHGLSMHTCLEGTGVRQRDLSDPLGIVSAEQELQLIRNLWAHRGNCPALGTQAGARYHF
TAYGMLGFAMVSSPTLQSAFDISVKYSQLTFAFSHFKLKESEHESNIIVDTSDVPEALRQFITERDIAALLTVQRDLFPS
QPVLYNLYFSFPRPARSDHYEAIYGVKPIFGCKETFAELNRKALAQPLPQANELALKSAEEQCQLVLERRLSGTGLAVKV
RDRLLHGGVNLPDMKDVAKDLCVTPRTLHRHLEEEGVTFLELRDEVRLTLAENLLQNRNLLVKDIASRLGYSSATSFISA
FRRWKGMTPLVYRNRFLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38234; Mature: 38234

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRNFVRSITSMRLLAELGHDHGLSMHTCLEGTGVRQRDLSDPLGIVSAEQELQLIRNL
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHH
WAHRGNCPALGTQAGARYHFTAYGMLGFAMVSSPTLQSAFDISVKYSQLTFAFSHFKLKE
HHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHHCCC
SEHESNIIVDTSDVPEALRQFITERDIAALLTVQRDLFPSQPVLYNLYFSFPRPARSDHY
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
EAIYGVKPIFGCKETFAELNRKALAQPLPQANELALKSAEEQCQLVLERRLSGTGLAVKV
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
RDRLLHGGVNLPDMKDVAKDLCVTPRTLHRHLEEEGVTFLELRDEVRLTLAENLLQNRNL
HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCH
LVKDIASRLGYSSATSFISAFRRWKGMTPLVYRNRFLS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MNRRNFVRSITSMRLLAELGHDHGLSMHTCLEGTGVRQRDLSDPLGIVSAEQELQLIRNL
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHH
WAHRGNCPALGTQAGARYHFTAYGMLGFAMVSSPTLQSAFDISVKYSQLTFAFSHFKLKE
HHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHHCCC
SEHESNIIVDTSDVPEALRQFITERDIAALLTVQRDLFPSQPVLYNLYFSFPRPARSDHY
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
EAIYGVKPIFGCKETFAELNRKALAQPLPQANELALKSAEEQCQLVLERRLSGTGLAVKV
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
RDRLLHGGVNLPDMKDVAKDLCVTPRTLHRHLEEEGVTFLELRDEVRLTLAENLLQNRNL
HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCH
LVKDIASRLGYSSATSFISAFRRWKGMTPLVYRNRFLS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]