| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
Click here to switch to the map view.
The map label for this gene is hflK [H]
Identifier: 182678703
GI number: 182678703
Start: 1956760
End: 1957929
Strand: Direct
Name: hflK [H]
Synonym: Bind_1730
Alternate gene names: 182678703
Gene position: 1956760-1957929 (Clockwise)
Preceding gene: 182678702
Following gene: 182678704
Centisome position: 46.92
GC content: 58.8
Gene sequence:
>1170_bases ATGCCCTGGAGCAATAACGGCGGCAATGGCGAGAAGGGCATGGAGCCGAGCGGGAATCCCTGGAAATCTGGAACGGAAGG CCCTTGGGGTCAGCGCCCGGAACCTCCGTCCAGCGATTTCGGAGATTGGCTCCGGCGCGGCCTGGACAGATTGAGGCAAC TTCCTCCGACCGGCTGGAATATCAATATCGGCATCGGCGTTGTGCTGCTCCTCCTCTTCCTTTGGCTCGCATCCGGTTTC TATACCGTGCGGCCCAATGAGATCGGCCTCAACAAGACATTCGGACGCTTTACCAGCAGGGCGAATCCCGGCCTCAATTA CAACTATCCCTTCCCCATCGGCAGCGTGCAGATCCTGCAAGTGACCGATCGGAATACGATCAATATCGGCTTTACCATCC GGCCGGATGCCCGCCATCCCAATACCCAGGCACAATATGATCTGCCCGAGGAAAGCCTGATGCTGACGGGCGATGAAAAT ATCGCCGATGTGAAATTCGTGGTGGTCTGGCAGATCGATCCTTTGCGCCCCGAGGATTTTGCCTTCAATGTCGCCAATCA GCGTGAAACCGTGAAAGCCGTCGCTGAAAGCGCCATGCGCGAAGTGATCGGGCGCAGCCAGATCCAGCGCATTCTGACCG CCGAGCGCAAGGTCATCGAGCCGGCGGTGCAGGAGCTCATGCAGAAAGTCCTCAACGACTACAAAGCTGGCGTTCTCATT TTGCAAGTACAATTGCAATCCGTCGATCCACCTGAGCAGGTGATTGCCGCCTTTCGCGATGTGACAGCGGCGCAGCAGGA TCTCGATCGTATGCGCAACGAGGCTGAAGCCTATGCCAATCGCATCGTACCGGAAGCACGCGGCGCGGCGGCGGCAATCG TGCAGGAAGCAGAAGGTTATCGCGCCCGTTCCATCGCCGAGGCGACTGGCCAGGCGGCGCGCTTCAACCAGATTTACGAT GAATATAAAAAGGCTCCGCAAATCACACGCGAGCGGCTTTATCTCGAAACCCTCGAACGGGTTCTCGGCAGTGTGGACAA GGTGCTGATCGACGCCAAGACCGGCCAGGGAGCCGTCCAGGGCGTTCTCCCCTATCTGCCGCTCGATCACTTCCAGACCG AGACCAAGGCGCCGGAGACCCGGGCCCCCAAGGCGGGAGATCAGAAATGA
Upstream 100 bases:
>100_bases GGCGCGACTATCCACTCATGATTGCTTGACTTACAAAACGCATCAGGAAGGATATCCGGCGATGCATGACCTCTATGCGC AGCGAACCTGGAAAAGATGA
Downstream 100 bases:
>100_bases AATACCCGTCCGGCCTCGCGCTTTCGCTCGTGCTGCTTGTCCTTGTCCTTCTCGGCGGTGGCACGTTCTTCATCGTGCAG CAGACACAGCAAGCCCTGGT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MPWSNNGGNGEKGMEPSGNPWKSGTEGPWGQRPEPPSSDFGDWLRRGLDRLRQLPPTGWNINIGIGVVLLLLFLWLASGF YTVRPNEIGLNKTFGRFTSRANPGLNYNYPFPIGSVQILQVTDRNTINIGFTIRPDARHPNTQAQYDLPEESLMLTGDEN IADVKFVVVWQIDPLRPEDFAFNVANQRETVKAVAESAMREVIGRSQIQRILTAERKVIEPAVQELMQKVLNDYKAGVLI LQVQLQSVDPPEQVIAAFRDVTAAQQDLDRMRNEAEAYANRIVPEARGAAAAIVQEAEGYRARSIAEATGQAARFNQIYD EYKKAPQITRERLYLETLERVLGSVDKVLIDAKTGQGAVQGVLPYLPLDHFQTETKAPETRAPKAGDQK
Sequences:
>Translated_389_residues MPWSNNGGNGEKGMEPSGNPWKSGTEGPWGQRPEPPSSDFGDWLRRGLDRLRQLPPTGWNINIGIGVVLLLLFLWLASGF YTVRPNEIGLNKTFGRFTSRANPGLNYNYPFPIGSVQILQVTDRNTINIGFTIRPDARHPNTQAQYDLPEESLMLTGDEN IADVKFVVVWQIDPLRPEDFAFNVANQRETVKAVAESAMREVIGRSQIQRILTAERKVIEPAVQELMQKVLNDYKAGVLI LQVQLQSVDPPEQVIAAFRDVTAAQQDLDRMRNEAEAYANRIVPEARGAAAAIVQEAEGYRARSIAEATGQAARFNQIYD EYKKAPQITRERLYLETLERVLGSVDKVLIDAKTGQGAVQGVLPYLPLDHFQTETKAPETRAPKAGDQK >Mature_388_residues PWSNNGGNGEKGMEPSGNPWKSGTEGPWGQRPEPPSSDFGDWLRRGLDRLRQLPPTGWNINIGIGVVLLLLFLWLASGFY TVRPNEIGLNKTFGRFTSRANPGLNYNYPFPIGSVQILQVTDRNTINIGFTIRPDARHPNTQAQYDLPEESLMLTGDENI ADVKFVVVWQIDPLRPEDFAFNVANQRETVKAVAESAMREVIGRSQIQRILTAERKVIEPAVQELMQKVLNDYKAGVLIL QVQLQSVDPPEQVIAAFRDVTAAQQDLDRMRNEAEAYANRIVPEARGAAAAIVQEAEGYRARSIAEATGQAARFNQIYDE YKKAPQITRERLYLETLERVLGSVDKVLIDAKTGQGAVQGVLPYLPLDHFQTETKAPETRAPKAGDQK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=305, Percent_Identity=36.7213114754098, Blast_Score=190, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 43393; Mature: 43261
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWSNNGGNGEKGMEPSGNPWKSGTEGPWGQRPEPPSSDFGDWLRRGLDRLRQLPPTGWN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE INIGIGVVLLLLFLWLASGFYTVRPNEIGLNKTFGRFTSRANPGLNYNYPFPIGSVQILQ EEHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEE VTDRNTINIGFTIRPDARHPNTQAQYDLPEESLMLTGDENIADVKFVVVWQIDPLRPEDF EECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCC AFNVANQRETVKAVAESAMREVIGRSQIQRILTAERKVIEPAVQELMQKVLNDYKAGVLI EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LQVQLQSVDPPEQVIAAFRDVTAAQQDLDRMRNEAEAYANRIVPEARGAAAAIVQEAEGY EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC RARSIAEATGQAARFNQIYDEYKKAPQITRERLYLETLERVLGSVDKVLIDAKTGQGAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHH GVLPYLPLDHFQTETKAPETRAPKAGDQK HHHCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PWSNNGGNGEKGMEPSGNPWKSGTEGPWGQRPEPPSSDFGDWLRRGLDRLRQLPPTGWN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCE INIGIGVVLLLLFLWLASGFYTVRPNEIGLNKTFGRFTSRANPGLNYNYPFPIGSVQILQ EEHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEE VTDRNTINIGFTIRPDARHPNTQAQYDLPEESLMLTGDENIADVKFVVVWQIDPLRPEDF EECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCC AFNVANQRETVKAVAESAMREVIGRSQIQRILTAERKVIEPAVQELMQKVLNDYKAGVLI EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LQVQLQSVDPPEQVIAAFRDVTAAQQDLDRMRNEAEAYANRIVPEARGAAAAIVQEAEGY EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC RARSIAEATGQAARFNQIYDEYKKAPQITRERLYLETLERVLGSVDKVLIDAKTGQGAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHH GVLPYLPLDHFQTETKAPETRAPKAGDQK HHHCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]