| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ttuD [H]
Identifier: 182678694
GI number: 182678694
Start: 1945332
End: 1946675
Strand: Direct
Name: ttuD [H]
Synonym: Bind_1721
Alternate gene names: 182678694
Gene position: 1945332-1946675 (Clockwise)
Preceding gene: 182678690
Following gene: 182678695
Centisome position: 46.65
GC content: 62.2
Gene sequence:
>1344_bases ATGCCGTTGGACGCCCCGAACAAGACTTTTGATTCGAAGGCTGATGCGCGAGCACGCCAAATTTTGCGCGAAATTTTCGA TACCGCCGTCGCCGCGGCCGATCCCCGCAAGGTTCTTAAAAATTATCTGCCCGAGCCGCCGCGTTCAGGCCGTTGCATCG TTGTCGGTGCCGGCAAATCCTCGGCCTTGATGGCCGCCGCATTGGAAGACGCATTGGCCGAGGCCTGGCCCACTATCTCG CTGTCAGGTCTCGTCATCACCCGTTACGGCCATGCGGTTCCGACGCGAAAGATTGAAATCGTCGAGGCTTCGCATCCGGT GCCGGACGCCGCCGGTGAGGCCGCCGCGCGCCGTGTGCTTGCCGCCGTTCAAGGACTGAAGCCCGATGATCTGGTCATCG CCCTGATGTCGGGCGGCGGCTCCTCACTGCTCGCTTTACCGGCTGAGGGTCTGACGCTGGCCGATAAACAGGCGGTCAAT CGCGCTTTGCTCGCCAGCGGCGCGACCATCGCGGAAATGAATATCGTCCGCAAACATCTCTCGGCGATCAAAGGCGGGCG GCTCGCCGCCGCGTCAGCTCCGGCGCGGCTCGTGACTTTGGCGATCAGCGATATTCCGGGCGATGATCCGGCGGCGATCG CCAGCGGCCCCACTTATCCCGACGCCAGCACATTTGCCGATGCCCAGGCGATCGTCGCTCGATACGGTCTCGAACTGCCC CCCAATGTCGCCGACCATTTGCAACGTGCCGCCGACGAAACACCCAAGCCCGCCCAATTTTCCACGGTGGATTTCCGCCT CATCGCCACACCGCTCATGGCCTTGAGCGCCTGCGCCGAAAAAGCCCGAGACCTCGGCCTCACGCCCCTCATCCTCGGCG ATGCGCTCGAAGGAGAAGCCCGCGAAATGGGGATCATTATGGCCGGTATGGCCCGCAGCGTGGCGGCGCATGGCCTGCCG ATCAAGGCCCCTGCCCTTTTGCTCTCGGGTGGTGAGACGACGGTGACGATCTCGAAAGGCAAGGCTGGTCGTGGTGGCCG CAATATGGAATTTTTGCTGGCTCTCGCGGTGACTTTGCAAGGCGATGCAAACATCTGGGCTCTTGCCGGAGATACGGATG GAATCGATGGAACGGAAGATGCCGCCGGCGCTTTCATCACGCCCAACACACTCGCGCGGGCACGGGAGGCAGGCCTCGAC CCTTTGGCAAAGCTCCTTGAGCACGACAGCTATACCCTCTATGACCAATTGGGTGATCTGCTGCGCACCGGCCCGACGCT GACCAATGTCAATGATCTCCGCGCCATTCTGATCGAGCCGGGCGAGACAAACGGGACTTCTTGA
Upstream 100 bases:
>100_bases CGATCTGCGCCAAGAGAAGGCGTCGGGACAGGCTCCTGAAAGCTCATCTCACCTCCGATGTGGTTATTGAGATAAAAAAC GAGAAGATTGGGTAGGATTC
Downstream 100 bases:
>100_bases ACGATGAGAATTTGTTTCATCGGCGACAGTTATGTCAACGGAACAGGCGATGATGATTGCCTGGGATGGCCCGGTCGCAT TTGCGCGGAGGCGCGGCAGC
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MPLDAPNKTFDSKADARARQILREIFDTAVAAADPRKVLKNYLPEPPRSGRCIVVGAGKSSALMAAALEDALAEAWPTIS LSGLVITRYGHAVPTRKIEIVEASHPVPDAAGEAAARRVLAAVQGLKPDDLVIALMSGGGSSLLALPAEGLTLADKQAVN RALLASGATIAEMNIVRKHLSAIKGGRLAAASAPARLVTLAISDIPGDDPAAIASGPTYPDASTFADAQAIVARYGLELP PNVADHLQRAADETPKPAQFSTVDFRLIATPLMALSACAEKARDLGLTPLILGDALEGEAREMGIIMAGMARSVAAHGLP IKAPALLLSGGETTVTISKGKAGRGGRNMEFLLALAVTLQGDANIWALAGDTDGIDGTEDAAGAFITPNTLARAREAGLD PLAKLLEHDSYTLYDQLGDLLRTGPTLTNVNDLRAILIEPGETNGTS
Sequences:
>Translated_447_residues MPLDAPNKTFDSKADARARQILREIFDTAVAAADPRKVLKNYLPEPPRSGRCIVVGAGKSSALMAAALEDALAEAWPTIS LSGLVITRYGHAVPTRKIEIVEASHPVPDAAGEAAARRVLAAVQGLKPDDLVIALMSGGGSSLLALPAEGLTLADKQAVN RALLASGATIAEMNIVRKHLSAIKGGRLAAASAPARLVTLAISDIPGDDPAAIASGPTYPDASTFADAQAIVARYGLELP PNVADHLQRAADETPKPAQFSTVDFRLIATPLMALSACAEKARDLGLTPLILGDALEGEAREMGIIMAGMARSVAAHGLP IKAPALLLSGGETTVTISKGKAGRGGRNMEFLLALAVTLQGDANIWALAGDTDGIDGTEDAAGAFITPNTLARAREAGLD PLAKLLEHDSYTLYDQLGDLLRTGPTLTNVNDLRAILIEPGETNGTS >Mature_446_residues PLDAPNKTFDSKADARARQILREIFDTAVAAADPRKVLKNYLPEPPRSGRCIVVGAGKSSALMAAALEDALAEAWPTISL SGLVITRYGHAVPTRKIEIVEASHPVPDAAGEAAARRVLAAVQGLKPDDLVIALMSGGGSSLLALPAEGLTLADKQAVNR ALLASGATIAEMNIVRKHLSAIKGGRLAAASAPARLVTLAISDIPGDDPAAIASGPTYPDASTFADAQAIVARYGLELPP NVADHLQRAADETPKPAQFSTVDFRLIATPLMALSACAEKARDLGLTPLILGDALEGEAREMGIIMAGMARSVAAHGLPI KAPALLLSGGETTVTISKGKAGRGGRNMEFLLALAVTLQGDANIWALAGDTDGIDGTEDAAGAFITPNTLARAREAGLDP LAKLLEHDSYTLYDQLGDLLRTGPTLTNVNDLRAILIEPGETNGTS
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=487, Percent_Identity=33.264887063655, Blast_Score=188, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193205461, Length=465, Percent_Identity=30.1075268817204, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI19920578, Length=487, Percent_Identity=29.7741273100616, Blast_Score=146, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 46217; Mature: 46086
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDAPNKTFDSKADARARQILREIFDTAVAAADPRKVLKNYLPEPPRSGRCIVVGAGKS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCC SALMAAALEDALAEAWPTISLSGLVITRYGHAVPTRKIEIVEASHPVPDAAGEAAARRVL HHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH AAVQGLKPDDLVIALMSGGGSSLLALPAEGLTLADKQAVNRALLASGATIAEMNIVRKHL HHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHH SAIKGGRLAAASAPARLVTLAISDIPGDDPAAIASGPTYPDASTFADAQAIVARYGLELP HHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PNVADHLQRAADETPKPAQFSTVDFRLIATPLMALSACAEKARDLGLTPLILGDALEGEA CCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCH REMGIIMAGMARSVAAHGLPIKAPALLLSGGETTVTISKGKAGRGGRNMEFLLALAVTLQ HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHEEEEEEEEEC GDANIWALAGDTDGIDGTEDAAGAFITPNTLARAREAGLDPLAKLLEHDSYTLYDQLGDL CCCCEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHH LRTGPTLTNVNDLRAILIEPGETNGTS HHCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure PLDAPNKTFDSKADARARQILREIFDTAVAAADPRKVLKNYLPEPPRSGRCIVVGAGKS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCC SALMAAALEDALAEAWPTISLSGLVITRYGHAVPTRKIEIVEASHPVPDAAGEAAARRVL HHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH AAVQGLKPDDLVIALMSGGGSSLLALPAEGLTLADKQAVNRALLASGATIAEMNIVRKHL HHHHCCCCCCEEEEEECCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHH SAIKGGRLAAASAPARLVTLAISDIPGDDPAAIASGPTYPDASTFADAQAIVARYGLELP HHHCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC PNVADHLQRAADETPKPAQFSTVDFRLIATPLMALSACAEKARDLGLTPLILGDALEGEA CCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCH REMGIIMAGMARSVAAHGLPIKAPALLLSGGETTVTISKGKAGRGGRNMEFLLALAVTLQ HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHEEEEEEEEEC GDANIWALAGDTDGIDGTEDAAGAFITPNTLARAREAGLDPLAKLLEHDSYTLYDQLGDL CCCCEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHH LRTGPTLTNVNDLRAILIEPGETNGTS HHCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]