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The map label for this gene is clpS1 [H]

Identifier: 182678642

GI number: 182678642

Start: 1888007

End: 1888420

Strand: Reverse

Name: clpS1 [H]

Synonym: Bind_1668

Alternate gene names: 182678642

Gene position: 1888420-1888007 (Counterclockwise)

Preceding gene: 182678643

Following gene: 182678641

Centisome position: 45.28

GC content: 55.8

Gene sequence:

>414_bases
GTGCATGGACGGTTTCTGTCCGCAATCCGTCGCCCGCCCTTGTTGGCTCGCCTAGCGGTATTCGCCGGGCTGCGCATTCG
CGGAGCCGGCAAGGACCCGCAAAAGGGAGGCGATGGTGGTTCCGGCACAGCTGTCATCACCCGTCCCAAAACCCAGACGC
GACGTCCTAGCATGTATCGCGTCCTGCTTCTTAACGACGATTACACTCCCATGGAATTCGTCGTTTCGGTCCTGAAGAAA
TATTTCAACAAGGGACCTGAGGAAGCCACTAGGATCATGCTGCATGTACATCAGCATGGTGTCGGGGAATGCGGCATCTT
CACCTATGAAGTTGCCGAGACGAAAGTAACGCAGGTGATGGATTACGCGCGCAAGCACCAGCATCCCCTGCAGTGCATCA
TGGAAAAGAAATGA

Upstream 100 bases:

>100_bases
CTTAATTCCAGAGCTCGCGGTACGCGTGCGTGGCGCATGAAAGAATGAAACAAGGACTTCGGCGGTGACGGCAGGACTTC
TACGGCGATCGAATTTTCGG

Downstream 100 bases:

>100_bases
GAGGTTGGAGCCTATGCCGTCCTTCTCCCGCAATTTGGAACAATCGCTTCATCGGGCTCTCGCGATCGCCAACGAGCGTC
ACCATGAATATGCGACTCTT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MHGRFLSAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYRVLLLNDDYTPMEFVVSVLKK
YFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVMDYARKHQHPLQCIMEKK

Sequences:

>Translated_137_residues
MHGRFLSAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYRVLLLNDDYTPMEFVVSVLKK
YFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVMDYARKHQHPLQCIMEKK
>Mature_137_residues
MHGRFLSAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYRVLLLNDDYTPMEFVVSVLKK
YFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVMDYARKHQHPLQCIMEKK

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=81, Percent_Identity=60.4938271604938, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 15449; Mature: 15449

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGRFLSAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYR
CCCHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE
VLLLNDDYTPMEFVVSVLKKYFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVM
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
DYARKHQHPLQCIMEKK
HHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MHGRFLSAIRRPPLLARLAVFAGLRIRGAGKDPQKGGDGGSGTAVITRPKTQTRRPSMYR
CCCHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEE
VLLLNDDYTPMEFVVSVLKKYFNKGPEEATRIMLHVHQHGVGECGIFTYEVAETKVTQVM
EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHH
DYARKHQHPLQCIMEKK
HHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]