| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678605
Identifier: 182678605
GI number: 182678605
Start: 1842520
End: 1844916
Strand: Direct
Name: 182678605
Synonym: Bind_1631
Alternate gene names: NA
Gene position: 1842520-1844916 (Clockwise)
Preceding gene: 182678603
Following gene: 182678606
Centisome position: 44.18
GC content: 55.99
Gene sequence:
>2397_bases ATGACGAGAGCCCGCTCACTTGTTGTCATCATAGTCTGTTTGTTCAGTTTGATGAACATGTTTGCCTCGTCTGCAATGGC GCAATCCCTCTCGCCGGATGAGGCGCGGGCGATCGCCAAGGACGCCACCATCTACGGCTTTCCACTCGTGGACAGCTACC GTATTCAATATTCCTATTTCGTCGACCGCAACAATCCTGAGTTCAAGGCGCCTTGGAACACGCTGAGCAATGTCGCACGC GTCTTCACGCCGGATGACAAAGCGATCCAGACACCTAATTCCGATACGCCCTATTCATTCCTTGGCGCGGACCTGCGGGC AGAGCCACTGGTGATCAGCGTTCCCGCCATCGAGAAGGAGCGATACTACTCGCTCCAATTCATCGACATGTACACGTTCA ATTTTGCCTATGTAGGCAGCCGCGCAACCGGGAATAATGCCGGAAACTTTCTGTTGGCCGGACCCAACTGGAAGGGCGAG ACACCCCCTGGCATCAAGGCGGTGATCCGATCAGAAACAGAATTTGCCTTCGTCCTCTATCGGACTCAGCTTTTCAATCC GGCCGATATCGACAATGTCAAAAAAATCCAGGCCGGCTACAAGGTCGTGCCATTGTCGCAATTCCTCGGCAAACCGGCAC CACCCGCCCCTCCTGTCGTCAATTTCATCAAGCCATTGAGCGCTGAGGAGGAAAAGTCTTCGCCCGAGTTTTTCAATATT CTCGACTTCGTTCTCCAATTCTGCCCCACACATCCCTCTGAAACGAAACTGATGGCGCGCTTTGCCAAGCTGGGGCTTGG CGCACATGGCACGTTCGATTCAAAAACCCTCTCACCCGATATACGCAAGGCGGTCAATGAGGGAATGGCCGATGCCTGGA ACACGTTCAAGGAGTTCAAGGAGAATCAACTCGATACCGGAAAGAAGGCGAGCGCCGACAGTTTTGGGACGCGCGCGTTC CTGAACGGAAATTACCTCGATCGGATGGCCGCGGCCGTCCTGGGTATCTTTGGTAATTCGAAGGATGAGGCGATCTATCC AGTCTATTTCGTCGATGACGGAAAGAAAGCGCTGAACGGAAGCAATCACTATGAGCTTCGGTTTGCCCCTGATCAGTTGC CGCCAGTCAACGCGTTCTGGTCACTGACCCTTTATGAACTGCCATCCAGTCTTCTCTCAGCCAACCCGCTCAACCGGTAT CTGATCAACTCGCCCATGCTGCCGGACCTGAAGCGTGATGCTGACGGCGGTATCACGCTTTATGTCCAGCATGACTCGCC CGGCAAGGAGAGGGAAGCCAATTGGCTCCCCGCGCCAAATGGTCCGTTCTTCACAGTGATGCGGCTCTATTGGCCGAAGC CGGCCGCCCTCGATGGCGCATGGAAAGCGCCGCCGCTCCTGCGGGTGAATGACAAAACGCAATCGTCCCCCAAACCCCGT GCGGTCAATACAATCCCCGTCACCGTCGACAACTTCATTCGAGCCGAGTCTGATACCTATCTCGCGGCTCTGGTCAAGGA AGGCGGCCTTGGCAAGTTCAACCATCGCCGAGAGCCCGCGGCGATCGACAACCAGACTGTCATTCGCTTGAATCGTGACA CGCTCTATTCGTCAGCGGTGTTCGACCTCGACGCGGGGCCCGTGACGATCAGCCTGCCCGACGCAGGCAAGCGCTTCATG TCAATGCAGGTGATCAACCAGGACCATTATGTGCCAGCAGTGGTCTATGGCGCTGGTTCCTACACGTTCGACAAGGAGAA GGTCGGTACGCGCTACGCCCTCTTCGCGATCCGCACGCTGGTCAATCCGGCAGATCCCAAGGATATTGATCAAGTTCACG CCCTGCAGGACGCGATCAAGGTCGAGCAGAAGAGTTTGGGCAGCTTCACGGTCCCAAACTGGGACCGCGCGAGCCAGAAG AAAGTGCGTGACGCCCTCCTGGTTCTCAGTTCGACACTGCCCGACTTCAAAAAGGCATTCGGTACGAAAGACGATGTCGA TCCCGTGCGTCATCTCATCGGCACGGCGTCGGCCTGGGGCGGCAATCCCGATAAGGACGCCACTTATCTCAATATTACGC CGAGCAAGAATGACGGCGCCACCATCTATCGCCTCAATGTCAAAAATGTGCCGGTCGATGGCTTCTGGTCGGTCAGCGTC TATAATGCGGAGGGCTATTATCAGCCCAACCCACTGAACGCCTACACGCTCAACGATATCACGGCCAAGAAAAGCGATGA TGGCTCGATCACAGTCCAGTTCGGTGGCTGCGACGGCAAAATCGCCAACTGTCTTCCGATCATGCCGGGCTGGAACTATA CCGTGCGCCTCTATCGACCACGCGCCGAAATCCTCAACGGAACCTGGAGTTTTCCTGAGCCTCAGCCGGTCCCTTGA
Upstream 100 bases:
>100_bases GCAGGGAACAACATAGACAGCCAGACAAGGCTCCCATGGGGGCTTCGGTAGAGATCAAAGCACAAGTCGGTTTCGTGGCC CCGAATATGGGAAAACATTT
Downstream 100 bases:
>100_bases ACCGGAGGCAATGGGACTTCCCCGTGCAGCAGAGGGGGAAGCGTGTGAATGTCGCCGGAGATTGGGTGACAGTCAAAATT CATTCTTTGTTATGACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 798; Mature: 797
Protein sequence:
>798_residues MTRARSLVVIIVCLFSLMNMFASSAMAQSLSPDEARAIAKDATIYGFPLVDSYRIQYSYFVDRNNPEFKAPWNTLSNVAR VFTPDDKAIQTPNSDTPYSFLGADLRAEPLVISVPAIEKERYYSLQFIDMYTFNFAYVGSRATGNNAGNFLLAGPNWKGE TPPGIKAVIRSETEFAFVLYRTQLFNPADIDNVKKIQAGYKVVPLSQFLGKPAPPAPPVVNFIKPLSAEEEKSSPEFFNI LDFVLQFCPTHPSETKLMARFAKLGLGAHGTFDSKTLSPDIRKAVNEGMADAWNTFKEFKENQLDTGKKASADSFGTRAF LNGNYLDRMAAAVLGIFGNSKDEAIYPVYFVDDGKKALNGSNHYELRFAPDQLPPVNAFWSLTLYELPSSLLSANPLNRY LINSPMLPDLKRDADGGITLYVQHDSPGKEREANWLPAPNGPFFTVMRLYWPKPAALDGAWKAPPLLRVNDKTQSSPKPR AVNTIPVTVDNFIRAESDTYLAALVKEGGLGKFNHRREPAAIDNQTVIRLNRDTLYSSAVFDLDAGPVTISLPDAGKRFM SMQVINQDHYVPAVVYGAGSYTFDKEKVGTRYALFAIRTLVNPADPKDIDQVHALQDAIKVEQKSLGSFTVPNWDRASQK KVRDALLVLSSTLPDFKKAFGTKDDVDPVRHLIGTASAWGGNPDKDATYLNITPSKNDGATIYRLNVKNVPVDGFWSVSV YNAEGYYQPNPLNAYTLNDITAKKSDDGSITVQFGGCDGKIANCLPIMPGWNYTVRLYRPRAEILNGTWSFPEPQPVP
Sequences:
>Translated_798_residues MTRARSLVVIIVCLFSLMNMFASSAMAQSLSPDEARAIAKDATIYGFPLVDSYRIQYSYFVDRNNPEFKAPWNTLSNVAR VFTPDDKAIQTPNSDTPYSFLGADLRAEPLVISVPAIEKERYYSLQFIDMYTFNFAYVGSRATGNNAGNFLLAGPNWKGE TPPGIKAVIRSETEFAFVLYRTQLFNPADIDNVKKIQAGYKVVPLSQFLGKPAPPAPPVVNFIKPLSAEEEKSSPEFFNI LDFVLQFCPTHPSETKLMARFAKLGLGAHGTFDSKTLSPDIRKAVNEGMADAWNTFKEFKENQLDTGKKASADSFGTRAF LNGNYLDRMAAAVLGIFGNSKDEAIYPVYFVDDGKKALNGSNHYELRFAPDQLPPVNAFWSLTLYELPSSLLSANPLNRY LINSPMLPDLKRDADGGITLYVQHDSPGKEREANWLPAPNGPFFTVMRLYWPKPAALDGAWKAPPLLRVNDKTQSSPKPR AVNTIPVTVDNFIRAESDTYLAALVKEGGLGKFNHRREPAAIDNQTVIRLNRDTLYSSAVFDLDAGPVTISLPDAGKRFM SMQVINQDHYVPAVVYGAGSYTFDKEKVGTRYALFAIRTLVNPADPKDIDQVHALQDAIKVEQKSLGSFTVPNWDRASQK KVRDALLVLSSTLPDFKKAFGTKDDVDPVRHLIGTASAWGGNPDKDATYLNITPSKNDGATIYRLNVKNVPVDGFWSVSV YNAEGYYQPNPLNAYTLNDITAKKSDDGSITVQFGGCDGKIANCLPIMPGWNYTVRLYRPRAEILNGTWSFPEPQPVP >Mature_797_residues TRARSLVVIIVCLFSLMNMFASSAMAQSLSPDEARAIAKDATIYGFPLVDSYRIQYSYFVDRNNPEFKAPWNTLSNVARV FTPDDKAIQTPNSDTPYSFLGADLRAEPLVISVPAIEKERYYSLQFIDMYTFNFAYVGSRATGNNAGNFLLAGPNWKGET PPGIKAVIRSETEFAFVLYRTQLFNPADIDNVKKIQAGYKVVPLSQFLGKPAPPAPPVVNFIKPLSAEEEKSSPEFFNIL DFVLQFCPTHPSETKLMARFAKLGLGAHGTFDSKTLSPDIRKAVNEGMADAWNTFKEFKENQLDTGKKASADSFGTRAFL NGNYLDRMAAAVLGIFGNSKDEAIYPVYFVDDGKKALNGSNHYELRFAPDQLPPVNAFWSLTLYELPSSLLSANPLNRYL INSPMLPDLKRDADGGITLYVQHDSPGKEREANWLPAPNGPFFTVMRLYWPKPAALDGAWKAPPLLRVNDKTQSSPKPRA VNTIPVTVDNFIRAESDTYLAALVKEGGLGKFNHRREPAAIDNQTVIRLNRDTLYSSAVFDLDAGPVTISLPDAGKRFMS MQVINQDHYVPAVVYGAGSYTFDKEKVGTRYALFAIRTLVNPADPKDIDQVHALQDAIKVEQKSLGSFTVPNWDRASQKK VRDALLVLSSTLPDFKKAFGTKDDVDPVRHLIGTASAWGGNPDKDATYLNITPSKNDGATIYRLNVKNVPVDGFWSVSVY NAEGYYQPNPLNAYTLNDITAKKSDDGSITVQFGGCDGKIANCLPIMPGWNYTVRLYRPRAEILNGTWSFPEPQPVP
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88396; Mature: 88265
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRARSLVVIIVCLFSLMNMFASSAMAQSLSPDEARAIAKDATIYGFPLVDSYRIQYSYF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCEEEEEEEE VDRNNPEFKAPWNTLSNVARVFTPDDKAIQTPNSDTPYSFLGADLRAEPLVISVPAIEKE EECCCCCCCCCHHHHHHHHEEECCCCCEEECCCCCCCHHHHCCCCCCCCEEEECCCCCCC RYYSLQFIDMYTFNFAYVGSRATGNNAGNFLLAGPNWKGETPPGIKAVIRSETEFAFVLY CEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHEECCCCEEEEEE RTQLFNPADIDNVKKIQAGYKVVPLSQFLGKPAPPAPPVVNFIKPLSAEEEKSSPEFFNI EECCCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHH LDFVLQFCPTHPSETKLMARFAKLGLGAHGTFDSKTLSPDIRKAVNEGMADAWNTFKEFK HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH ENQLDTGKKASADSFGTRAFLNGNYLDRMAAAVLGIFGNSKDEAIYPVYFVDDGKKALNG HHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCC SNHYELRFAPDQLPPVNAFWSLTLYELPSSLLSANPLNRYLINSPMLPDLKRDADGGITL CCEEEEEECCCCCCCCCHHHEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEE YVQHDSPGKEREANWLPAPNGPFFTVMRLYWPKPAALDGAWKAPPLLRVNDKTQSSPKPR EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC AVNTIPVTVDNFIRAESDTYLAALVKEGGLGKFNHRREPAAIDNQTVIRLNRDTLYSSAV CEEEEEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCEE FDLDAGPVTISLPDAGKRFMSMQVINQDHYVPAVVYGAGSYTFDKEKVGTRYALFAIRTL EECCCCCEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCEECHHHHCCHHHHHHHHHH VNPADPKDIDQVHALQDAIKVEQKSLGSFTVPNWDRASQKKVRDALLVLSSTLPDFKKAF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC GTKDDVDPVRHLIGTASAWGGNPDKDATYLNITPSKNDGATIYRLNVKNVPVDGFWSVSV CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE YNAEGYYQPNPLNAYTLNDITAKKSDDGSITVQFGGCDGKIANCLPIMPGWNYTVRLYRP ECCCCEECCCCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECC RAEILNGTWSFPEPQPVP HHHHCCCCCCCCCCCCCC >Mature Secondary Structure TRARSLVVIIVCLFSLMNMFASSAMAQSLSPDEARAIAKDATIYGFPLVDSYRIQYSYF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCCCEEEEEEEE VDRNNPEFKAPWNTLSNVARVFTPDDKAIQTPNSDTPYSFLGADLRAEPLVISVPAIEKE EECCCCCCCCCHHHHHHHHEEECCCCCEEECCCCCCCHHHHCCCCCCCCEEEECCCCCCC RYYSLQFIDMYTFNFAYVGSRATGNNAGNFLLAGPNWKGETPPGIKAVIRSETEFAFVLY CEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHEECCCCEEEEEE RTQLFNPADIDNVKKIQAGYKVVPLSQFLGKPAPPAPPVVNFIKPLSAEEEKSSPEFFNI EECCCCCCCCCHHHHHHCCCEEEEHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHH LDFVLQFCPTHPSETKLMARFAKLGLGAHGTFDSKTLSPDIRKAVNEGMADAWNTFKEFK HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHH ENQLDTGKKASADSFGTRAFLNGNYLDRMAAAVLGIFGNSKDEAIYPVYFVDDGKKALNG HHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHCCC SNHYELRFAPDQLPPVNAFWSLTLYELPSSLLSANPLNRYLINSPMLPDLKRDADGGITL CCEEEEEECCCCCCCCCHHHEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEE YVQHDSPGKEREANWLPAPNGPFFTVMRLYWPKPAALDGAWKAPPLLRVNDKTQSSPKPR EEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCC AVNTIPVTVDNFIRAESDTYLAALVKEGGLGKFNHRREPAAIDNQTVIRLNRDTLYSSAV CEEEEEEEHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCEE FDLDAGPVTISLPDAGKRFMSMQVINQDHYVPAVVYGAGSYTFDKEKVGTRYALFAIRTL EECCCCCEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCEECHHHHCCHHHHHHHHHH VNPADPKDIDQVHALQDAIKVEQKSLGSFTVPNWDRASQKKVRDALLVLSSTLPDFKKAF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHC GTKDDVDPVRHLIGTASAWGGNPDKDATYLNITPSKNDGATIYRLNVKNVPVDGFWSVSV CCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE YNAEGYYQPNPLNAYTLNDITAKKSDDGSITVQFGGCDGKIANCLPIMPGWNYTVRLYRP ECCCCEECCCCCCEEEECCEECCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECC RAEILNGTWSFPEPQPVP HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA