Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678565

Identifier: 182678565

GI number: 182678565

Start: 1792373

End: 1793440

Strand: Direct

Name: 182678565

Synonym: Bind_1590

Alternate gene names: NA

Gene position: 1792373-1793440 (Clockwise)

Preceding gene: 182678564

Following gene: 182678566

Centisome position: 42.98

GC content: 57.21

Gene sequence:

>1068_bases
ATGATAGACACGGAGTTGCTCGCCAAACCGAAAATCGTCTGGGACTGGCTCGTTGACGGCTTGAGCAGCGTCGTCCTCTC
CTGCCGCGAACATTTTGCGCCGCCGAAACGTCTTGTCCTGCATTTGGATGAAAATGGCGGATCAGAGATTTTTTCAGCGG
ACGGGATCCTGTTGGGCTCGATCGTGAAAGAGCCGACCGGCTTTAGCTGTCCCATGAGCCTGCGTGAAACGTTCAAGGAT
GCCTGGGTGGAGACGGTTTTGCCGCGTGGTTGGATGTTGCGCCGCGCCCTGCAGCCGATCGCAACGGAAAGCCTCCCTTT
CGTTGAAGCTTTGGCACGTCATCAGATCGATCGGCTGACGCCCTGGCGGGCCGCCGATACATATTTCGGTGTCAGAACCT
GGCCTTTCGAGGACGATGCCGCAAAATGCCATGTTGAGGTTGGTGTCGTCGCGAAATCCATGCTCCGGCCGCATTTGGAT
TTTCTGGCCCAAGCTGGAGTGGCGACCTCGAGCCTGTTGGCCACGGGCGACCAGACATCCCCTGATTTCGTCATTCGCAT
CGATGGCAGCGCCGATCGCGGCTTGGAGCGCTTGCGGCGGCAGATCGGCTTCGGCCTGGCCGGTTGCATGGCTTTGTTCA
TCTTGGGCTTCGGTGTTTTGACCCTGGAAAAATGGACGCTCGAATCCACGATCGGGACCCTTGACGAAGAGATCGCCCAT
CAACGCGCACTCCTGCATCCAGCGGATCAAATGGACGACAATGGTGTGGCGACTGCGCAATCCTTGCGTCGGCGTCATCA
GGCTGGCCCCTGTTTTGTCGGCATTCTCGACGATCTTTCCAAGGTTTTGCCGGATCACGCTCATCTCGATGATTTCTCCC
TGGACAAAGGCGTGTTGCGCATATCCGGTGTCTCTCGTCACGTCTCGGAGCTCGTGCCTTTGCTTGAGGGGACATCCATT
TTTAGCGAGGCCGGCTTTACAGGGGCGACGACACGAGAGGAGAATGGTGCCGATCGTTTCCATCTCGAAATGCGGATTGT
CGCGAAATCGGAAAATCGTTGCTCATGA

Upstream 100 bases:

>100_bases
AACGGTTTCCGGCGACGTTTCGAATTCATCCTCGTCACACCCAAGCCCCGCGATGATAAAGTCGATGTTATCGCTTGGCG
CATGGTCCCATGAGGTTGTG

Downstream 100 bases:

>100_bases
TGCCACCAGCTTCTTTCCTGAGCGTGCTGCGTAAGGTTCGCTATGATCGGGCCGCGATTGATTGGGCGTCCTTGGCGGGT
CGTCTCAAGGATCTCGCGAC

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: General Secretion Pathway Protein L GspL; General Secretion Pathway Protein L; Fimbrial Assembly

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD
AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD
FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH
QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI
FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS

Sequences:

>Translated_355_residues
MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD
AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD
FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH
QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI
FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS
>Mature_355_residues
MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD
AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD
FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH
QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI
FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39147; Mature: 39147

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEECCCCHHHH
IVKEPTGFSCPMSLRETFKDAWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLT
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLDFLAQAGVATSSLLATGDQTS
CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
PDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH
CCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLR
HHHHCCCCHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEE
ISGVSRHVSELVPLLEGTSIFSEAGFTGATTREENGADRFHLEMRIVAKSENRCS
ECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEECCCCHHHH
IVKEPTGFSCPMSLRETFKDAWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLT
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLDFLAQAGVATSSLLATGDQTS
CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
PDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH
CCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLR
HHHHCCCCHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEE
ISGVSRHVSELVPLLEGTSIFSEAGFTGATTREENGADRFHLEMRIVAKSENRCS
ECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA