| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678565
Identifier: 182678565
GI number: 182678565
Start: 1792373
End: 1793440
Strand: Direct
Name: 182678565
Synonym: Bind_1590
Alternate gene names: NA
Gene position: 1792373-1793440 (Clockwise)
Preceding gene: 182678564
Following gene: 182678566
Centisome position: 42.98
GC content: 57.21
Gene sequence:
>1068_bases ATGATAGACACGGAGTTGCTCGCCAAACCGAAAATCGTCTGGGACTGGCTCGTTGACGGCTTGAGCAGCGTCGTCCTCTC CTGCCGCGAACATTTTGCGCCGCCGAAACGTCTTGTCCTGCATTTGGATGAAAATGGCGGATCAGAGATTTTTTCAGCGG ACGGGATCCTGTTGGGCTCGATCGTGAAAGAGCCGACCGGCTTTAGCTGTCCCATGAGCCTGCGTGAAACGTTCAAGGAT GCCTGGGTGGAGACGGTTTTGCCGCGTGGTTGGATGTTGCGCCGCGCCCTGCAGCCGATCGCAACGGAAAGCCTCCCTTT CGTTGAAGCTTTGGCACGTCATCAGATCGATCGGCTGACGCCCTGGCGGGCCGCCGATACATATTTCGGTGTCAGAACCT GGCCTTTCGAGGACGATGCCGCAAAATGCCATGTTGAGGTTGGTGTCGTCGCGAAATCCATGCTCCGGCCGCATTTGGAT TTTCTGGCCCAAGCTGGAGTGGCGACCTCGAGCCTGTTGGCCACGGGCGACCAGACATCCCCTGATTTCGTCATTCGCAT CGATGGCAGCGCCGATCGCGGCTTGGAGCGCTTGCGGCGGCAGATCGGCTTCGGCCTGGCCGGTTGCATGGCTTTGTTCA TCTTGGGCTTCGGTGTTTTGACCCTGGAAAAATGGACGCTCGAATCCACGATCGGGACCCTTGACGAAGAGATCGCCCAT CAACGCGCACTCCTGCATCCAGCGGATCAAATGGACGACAATGGTGTGGCGACTGCGCAATCCTTGCGTCGGCGTCATCA GGCTGGCCCCTGTTTTGTCGGCATTCTCGACGATCTTTCCAAGGTTTTGCCGGATCACGCTCATCTCGATGATTTCTCCC TGGACAAAGGCGTGTTGCGCATATCCGGTGTCTCTCGTCACGTCTCGGAGCTCGTGCCTTTGCTTGAGGGGACATCCATT TTTAGCGAGGCCGGCTTTACAGGGGCGACGACACGAGAGGAGAATGGTGCCGATCGTTTCCATCTCGAAATGCGGATTGT CGCGAAATCGGAAAATCGTTGCTCATGA
Upstream 100 bases:
>100_bases AACGGTTTCCGGCGACGTTTCGAATTCATCCTCGTCACACCCAAGCCCCGCGATGATAAAGTCGATGTTATCGCTTGGCG CATGGTCCCATGAGGTTGTG
Downstream 100 bases:
>100_bases TGCCACCAGCTTCTTTCCTGAGCGTGCTGCGTAAGGTTCGCTATGATCGGGCCGCGATTGATTGGGCGTCCTTGGCGGGT CGTCTCAAGGATCTCGCGAC
Product: fimbrial assembly family protein
Products: NA
Alternate protein names: General Secretion Pathway Protein L GspL; General Secretion Pathway Protein L; Fimbrial Assembly
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS
Sequences:
>Translated_355_residues MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS >Mature_355_residues MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGSIVKEPTGFSCPMSLRETFKD AWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLTPWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLD FLAQAGVATSSLLATGDQTSPDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLRISGVSRHVSELVPLLEGTSI FSEAGFTGATTREENGADRFHLEMRIVAKSENRCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39147; Mature: 39147
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGS CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEECCCCHHHH IVKEPTGFSCPMSLRETFKDAWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLT HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLDFLAQAGVATSSLLATGDQTS CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC PDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH CCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLR HHHHCCCCHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEE ISGVSRHVSELVPLLEGTSIFSEAGFTGATTREENGADRFHLEMRIVAKSENRCS ECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure MIDTELLAKPKIVWDWLVDGLSSVVLSCREHFAPPKRLVLHLDENGGSEIFSADGILLGS CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEECCCCHHHH IVKEPTGFSCPMSLRETFKDAWVETVLPRGWMLRRALQPIATESLPFVEALARHQIDRLT HHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC PWRAADTYFGVRTWPFEDDAAKCHVEVGVVAKSMLRPHLDFLAQAGVATSSLLATGDQTS CCCCCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC PDFVIRIDGSADRGLERLRRQIGFGLAGCMALFILGFGVLTLEKWTLESTIGTLDEEIAH CCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRALLHPADQMDDNGVATAQSLRRRHQAGPCFVGILDDLSKVLPDHAHLDDFSLDKGVLR HHHHCCCCHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCEE ISGVSRHVSELVPLLEGTSIFSEAGFTGATTREENGADRFHLEMRIVAKSENRCS ECHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA