Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

Click here to switch to the map view.

The map label for this gene is 182678525

Identifier: 182678525

GI number: 182678525

Start: 1751843

End: 1752148

Strand: Reverse

Name: 182678525

Synonym: Bind_1550

Alternate gene names: NA

Gene position: 1752148-1751843 (Counterclockwise)

Preceding gene: 182678526

Following gene: 182678521

Centisome position: 42.02

GC content: 58.5

Gene sequence:

>306_bases
ATGAGCGTCAGAATCTACCGTCCCGCCAAAAGCGCGACGCAATCGGGTACGGCGCGTAGCAAGGTCTGGCTCCTGGTCTT
CGATCCGGCTTCGCCGCGCAGCACCGATCCTCTGATGGGATGGACGAGCTCCGGAGACATGAACAGCCAGGTTCGGCTGC
GCTTCACCACCAAGGAAGAAGCGATCGCCTATGCCGAGAAGAATGGGCTCGATTATCGAGTCGAGGAGCCCAAGCTCGCG
CCACGCAAAATCCTTTCCTATTCGGACAATTTTAAATCCACGCGGGCCGGTCCCTGGACACATTGA

Upstream 100 bases:

>100_bases
CAGTCTGGTAGCGCGGAAGTTTTGGGAACTTCAGGTCGCAGGTTCGAATCCTGCTGCCCCGACCACTTCGACGGCGATGG
ATGCGAGGAATGGAGGATAT

Downstream 100 bases:

>100_bases
GGCTGCCAAGCCTCACTTATAAGTGCTGTGCAGATTTGATCCGATCTCAGTTTCGGCCCCATAGCTCAGCTGGATAGAGC
AGCCGCCTTCTAAGCGGCAG

Product: ETC complex I subunit

Products: NA

Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; Oxidoreductase Protein; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; ETC Complex Subunit I; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; NADH Dehydrogenase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADHUbiquinone Oxidoreductase; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSVRIYRPAKSATQSGTARSKVWLLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEEAIAYAEKNGLDYRVEEPKLA
PRKILSYSDNFKSTRAGPWTH

Sequences:

>Translated_101_residues
MSVRIYRPAKSATQSGTARSKVWLLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEEAIAYAEKNGLDYRVEEPKLA
PRKILSYSDNFKSTRAGPWTH
>Mature_100_residues
SVRIYRPAKSATQSGTARSKVWLLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEEAIAYAEKNGLDYRVEEPKLAP
RKILSYSDNFKSTRAGPWTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505369, Length=89, Percent_Identity=46.0674157303371, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115533653, Length=101, Percent_Identity=40.5940594059406, Blast_Score=70, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18860539, Length=90, Percent_Identity=41.1111111111111, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11410; Mature: 11279

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRIYRPAKSATQSGTARSKVWLLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEE
CCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCC
AIAYAEKNGLDYRVEEPKLAPRKILSYSDNFKSTRAGPWTH
EEEECCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVRIYRPAKSATQSGTARSKVWLLVFDPASPRSTDPLMGWTSSGDMNSQVRLRFTTKEE
CEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEECCCC
AIAYAEKNGLDYRVEEPKLAPRKILSYSDNFKSTRAGPWTH
EEEECCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA