| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182678519
Identifier: 182678519
GI number: 182678519
Start: 1745839
End: 1746942
Strand: Direct
Name: 182678519
Synonym: Bind_1543
Alternate gene names: NA
Gene position: 1745839-1746942 (Clockwise)
Preceding gene: 182678518
Following gene: 182678522
Centisome position: 41.87
GC content: 59.69
Gene sequence:
>1104_bases TTGACGGACGGACTTGAGTTCACGCCCGATTGGTTCTCTAAGCCCGGGGATTCGCTACACGCGCAGATGGTACGACGTGG TCTCTCCGCCCAGCAGGTCGCCCAGAATCTCGACGGCGGGATTGCCACCTTGCGGGGGCTACTCGATGGTTCCAAAGCGA TCGACGCCGAGCACGCCCGGGTGCTCTCCGCCTCACTCGGGGGAACCGTCTCCTTTTGGTTGAAGCGCCAATCCAACTAT CAGGATGCTCTTGAGCGCGCGCTTGAGCGCGCATCTGCGGATGTCGACGAGTCCGAGGCTTGGCTCCAGCTCCAAGTGCC CGGACCGCGCCCAAAAGGACGCCTGTCCGGCCAGCGTCGGCGCGATGAGCTTCGTCGGCGTCTCACGTTTTTCAACGTTG GGACGATGAATGCGTGGAATGCGCGTTACGGGCGGATCTGCTCTGAAACGTTGTTCCGAACTTCTAGCGCGTTTGAGTCC AAGGACACAGCCGTGCTGATGTGGTTGCGAATGGGGGAACTTGCCACGGATCTAGTCACCACGCGGCCGTGGAACGTAGG TAATCTTCGGGATCGCCTCGATGCGATCAAGGCGCTTTCCAAGGTGAAGAGGCCGGAGCTGTTTCTACCGAAACTCAAGG CGCTATGCGCGGAAGCGGGCGTCGCTGTGGTCGCTAAAAAGGCCCCAGAGGGGTGTTGTGCGTCCGGCGCCAGTCGGATG GTCGGGCCGGACAAGGCCATGATCCTCATGAGCTTCCGCGGATTGGCCGACGACAAGTTTTGGTTCACGCTTCTGCACGA GATCGGGCATCTCCTGCTTCACGAGGCGAAGACCTTCGTCGATAACGACATGGAGGGCATCGACCAGAGCGAACGGGAGG CCAACGCATTCGCAGCGCAATGCATCGTACCGTTCGACAGATATGAGGAATTCGAGAACCTTGGCGATAATCGGAATTCC GTTATCAGGTTCAGTGTGCGATCCGGCGTGGCCCCCGGCCTCATCGTTGGTCAGATGCAGCACCACAAGATGATCCGCCC CAATGCGCTGAACGACTTGAAGAAGTTCTGGAAGTGGAGCGATCTGTCCCCGGTGCTGGACTAA
Upstream 100 bases:
>100_bases CCACGCTTGTCGTTGTAGGGCGACATAAGATGGGTTCTGACGGCCGCATTGTCTGGTCGAGTGTAACAAGGTTGAAGCTG TTGAAAATTGCGAGGGTGCC
Downstream 100 bases:
>100_bases CCGACGTAGTGGATGAAACGTCGAGGGCTCTTCTGCCAGTTGCATAGCGCGTCCTCCATGACGGCCATGCCTACATTCAA CTGTTGATCCAACGCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein; Plasmid Maintenance System Antidote Protein XRE Family; Helix-Turn-Helix Domain Protein; Plasmid Maintenance System Antidote Protein Xre Family
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTDGLEFTPDWFSKPGDSLHAQMVRRGLSAQQVAQNLDGGIATLRGLLDGSKAIDAEHARVLSASLGGTVSFWLKRQSNY QDALERALERASADVDESEAWLQLQVPGPRPKGRLSGQRRRDELRRRLTFFNVGTMNAWNARYGRICSETLFRTSSAFES KDTAVLMWLRMGELATDLVTTRPWNVGNLRDRLDAIKALSKVKRPELFLPKLKALCAEAGVAVVAKKAPEGCCASGASRM VGPDKAMILMSFRGLADDKFWFTLLHEIGHLLLHEAKTFVDNDMEGIDQSEREANAFAAQCIVPFDRYEEFENLGDNRNS VIRFSVRSGVAPGLIVGQMQHHKMIRPNALNDLKKFWKWSDLSPVLD
Sequences:
>Translated_367_residues MTDGLEFTPDWFSKPGDSLHAQMVRRGLSAQQVAQNLDGGIATLRGLLDGSKAIDAEHARVLSASLGGTVSFWLKRQSNY QDALERALERASADVDESEAWLQLQVPGPRPKGRLSGQRRRDELRRRLTFFNVGTMNAWNARYGRICSETLFRTSSAFES KDTAVLMWLRMGELATDLVTTRPWNVGNLRDRLDAIKALSKVKRPELFLPKLKALCAEAGVAVVAKKAPEGCCASGASRM VGPDKAMILMSFRGLADDKFWFTLLHEIGHLLLHEAKTFVDNDMEGIDQSEREANAFAAQCIVPFDRYEEFENLGDNRNS VIRFSVRSGVAPGLIVGQMQHHKMIRPNALNDLKKFWKWSDLSPVLD >Mature_366_residues TDGLEFTPDWFSKPGDSLHAQMVRRGLSAQQVAQNLDGGIATLRGLLDGSKAIDAEHARVLSASLGGTVSFWLKRQSNYQ DALERALERASADVDESEAWLQLQVPGPRPKGRLSGQRRRDELRRRLTFFNVGTMNAWNARYGRICSETLFRTSSAFESK DTAVLMWLRMGELATDLVTTRPWNVGNLRDRLDAIKALSKVKRPELFLPKLKALCAEAGVAVVAKKAPEGCCASGASRMV GPDKAMILMSFRGLADDKFWFTLLHEIGHLLLHEAKTFVDNDMEGIDQSEREANAFAAQCIVPFDRYEEFENLGDNRNSV IRFSVRSGVAPGLIVGQMQHHKMIRPNALNDLKKFWKWSDLSPVLD
Specific function: Unknown
COG id: COG3093
COG function: function code R; Plasmid maintenance system antidote protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41034; Mature: 40903
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGLEFTPDWFSKPGDSLHAQMVRRGLSAQQVAQNLDGGIATLRGLLDGSKAIDAEHAR CCCCCCCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHCCHHHHH VLSASLGGTVSFWLKRQSNYQDALERALERASADVDESEAWLQLQVPGPRPKGRLSGQRR HHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHH RDELRRRLTFFNVGTMNAWNARYGRICSETLFRTSSAFESKDTAVLMWLRMGELATDLVT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHH TRPWNVGNLRDRLDAIKALSKVKRPELFLPKLKALCAEAGVAVVAKKAPEGCCASGASRM CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCCC VGPDKAMILMSFRGLADDKFWFTLLHEIGHLLLHEAKTFVDNDMEGIDQSEREANAFAAQ CCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH CIVPFDRYEEFENLGDNRNSVIRFSVRSGVAPGLIVGQMQHHKMIRPNALNDLKKFWKWS HCCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC DLSPVLD CCCCCCC >Mature Secondary Structure TDGLEFTPDWFSKPGDSLHAQMVRRGLSAQQVAQNLDGGIATLRGLLDGSKAIDAEHAR CCCCCCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHCCHHHHH VLSASLGGTVSFWLKRQSNYQDALERALERASADVDESEAWLQLQVPGPRPKGRLSGQRR HHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHH RDELRRRLTFFNVGTMNAWNARYGRICSETLFRTSSAFESKDTAVLMWLRMGELATDLVT HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHH TRPWNVGNLRDRLDAIKALSKVKRPELFLPKLKALCAEAGVAVVAKKAPEGCCASGASRM CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCCC VGPDKAMILMSFRGLADDKFWFTLLHEIGHLLLHEAKTFVDNDMEGIDQSEREANAFAAQ CCCCHHEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH CIVPFDRYEEFENLGDNRNSVIRFSVRSGVAPGLIVGQMQHHKMIRPNALNDLKKFWKWS HCCCHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC DLSPVLD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA