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The map label for this gene is yhhS [C]

Identifier: 182678489

GI number: 182678489

Start: 1712896

End: 1714068

Strand: Reverse

Name: yhhS [C]

Synonym: Bind_1513

Alternate gene names: 182678489

Gene position: 1714068-1712896 (Counterclockwise)

Preceding gene: 182678490

Following gene: 182678487

Centisome position: 41.1

GC content: 63.6

Gene sequence:

>1173_bases
ATGTCTCCCTCCCTTATCGGCACCTTGCGCCTCGTCTCGGTCGTGGCCTTCACCTTCCTCGGCTTTCTGGCTGTCGGATT
GCCCCTGGCCGTGCTGCCGACCTATGTCGATCGTAATCTCGGTCTCGGCGCTTTCTGGGCGGGCCTCGCGGTTTCGACGC
TCTATATCTCGACCATTGCGAGCCGCACGCACATCGGGCAAATGACCGATCGCTTCGGGCCCAAACCCGCCGTCATCATC
GGATTTCTTGCTTATGTTGTCGGGGGTCTTCTCACCGCGGCTTCGGTTCCCACGCAATCTCTGCCGGTTTTAAGCCTCTG
CCTGCTGCTCGCCGGCCGGCTCGCTCTCGGCATCGGCGAGAGTGCCGTCAGCACCGGCGCGATTTCCTGGGCCATGGCCT
TGTTCGGAGCCAAGGAGACCGTCCGGATCATCGCCTGGAACGGCATCGCGACCAATGCCTCGCTGGCGGCGGCGGCACCG
ATCGGCGCCTGGATCGCCAGCCGCTATGGTTTCGTGGCGATCGGCCTTGTCACCGTGGCGGTGGCTCTTCTTGGTTTGAT
CCTGGGCCTTGCCCGCCCGACAGTGGAGATCAAGGTCGGCGCCGGCATGGGCGCTGGCCATGTGTTCAAAATCATTGCCC
CCTATGGCTTCACTCTGGCACTCGCGGGCGCCGGATTCGGCGTCATCATGACGTTCATCGTCCTCTATTTCGAGAGCCGC
GACTGGCCACATGCGCCGCTGGCGCTCACCACGTTCAGCGTGGCCTTCATGAGCCTGCGTTTCTTTCTCGCCCGCGCCGT
CACGCGTTTCGGCGGTGTTCCGGTAGCACGTGTGGCCTTGTTTCTCGAACTCGGCGGCTTCATCTTGCTCATCGTCGCCG
CCGGCCCCGCAATGGCGATCCTCGGCACCGCGCTCGCTGGTTTCGGCTATGCGGCGATCTTTCCCTCGCTGGGCGGCGAG
GCGATCGGCCGCGCGCCGCCGCAAAATCGGGGCGTGGCGCTCGGCCTCTATTCGATGTTTCAGGACGTCTCTCTGGGCGC
CACCGGCCCGGCGGCCGGTATATTGGCGACGCATTACGGCTATGCCTCGCCCTTCTATCTCGGAATCATGGCCATTGCTT
TGGGCCTGGTCGTCAGTTTCGGTCTCGATCCGAGAAAATCAACACAGGCCTGA

Upstream 100 bases:

>100_bases
CATTGGGGCGTATAGGAAGACGGCTTCCTATCATCAAAGCATCGGATCCGGCATTGGCCCAGTTTATGGATCGATTCGGT
GCTTTCTCACAAAAGATCCC

Downstream 100 bases:

>100_bases
GGCTCGCTCAAAAGCTCCGGCCATAAATCTCGTCGGCCCTTTTCTCGAAGGCTTCCGAGAATTTATGGAAGGCCATGTCG
AACATGCCGCCGACCAGAAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSPSLIGTLRLVSVVAFTFLGFLAVGLPLAVLPTYVDRNLGLGAFWAGLAVSTLYISTIASRTHIGQMTDRFGPKPAVII
GFLAYVVGGLLTAASVPTQSLPVLSLCLLLAGRLALGIGESAVSTGAISWAMALFGAKETVRIIAWNGIATNASLAAAAP
IGAWIASRYGFVAIGLVTVAVALLGLILGLARPTVEIKVGAGMGAGHVFKIIAPYGFTLALAGAGFGVIMTFIVLYFESR
DWPHAPLALTTFSVAFMSLRFFLARAVTRFGGVPVARVALFLELGGFILLIVAAGPAMAILGTALAGFGYAAIFPSLGGE
AIGRAPPQNRGVALGLYSMFQDVSLGATGPAAGILATHYGYASPFYLGIMAIALGLVVSFGLDPRKSTQA

Sequences:

>Translated_390_residues
MSPSLIGTLRLVSVVAFTFLGFLAVGLPLAVLPTYVDRNLGLGAFWAGLAVSTLYISTIASRTHIGQMTDRFGPKPAVII
GFLAYVVGGLLTAASVPTQSLPVLSLCLLLAGRLALGIGESAVSTGAISWAMALFGAKETVRIIAWNGIATNASLAAAAP
IGAWIASRYGFVAIGLVTVAVALLGLILGLARPTVEIKVGAGMGAGHVFKIIAPYGFTLALAGAGFGVIMTFIVLYFESR
DWPHAPLALTTFSVAFMSLRFFLARAVTRFGGVPVARVALFLELGGFILLIVAAGPAMAILGTALAGFGYAAIFPSLGGE
AIGRAPPQNRGVALGLYSMFQDVSLGATGPAAGILATHYGYASPFYLGIMAIALGLVVSFGLDPRKSTQA
>Mature_389_residues
SPSLIGTLRLVSVVAFTFLGFLAVGLPLAVLPTYVDRNLGLGAFWAGLAVSTLYISTIASRTHIGQMTDRFGPKPAVIIG
FLAYVVGGLLTAASVPTQSLPVLSLCLLLAGRLALGIGESAVSTGAISWAMALFGAKETVRIIAWNGIATNASLAAAAPI
GAWIASRYGFVAIGLVTVAVALLGLILGLARPTVEIKVGAGMGAGHVFKIIAPYGFTLALAGAGFGVIMTFIVLYFESRD
WPHAPLALTTFSVAFMSLRFFLARAVTRFGGVPVARVALFLELGGFILLIVAAGPAMAILGTALAGFGYAAIFPSLGGEA
IGRAPPQNRGVALGLYSMFQDVSLGATGPAAGILATHYGYASPFYLGIMAIALGLVVSFGLDPRKSTQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=391, Percent_Identity=40.4092071611253, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1788662, Length=364, Percent_Identity=39.8351648351648, Blast_Score=211, Evalue=6e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39995; Mature: 39864

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSLIGTLRLVSVVAFTFLGFLAVGLPLAVLPTYVDRNLGLGAFWAGLAVSTLYISTIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRTHIGQMTDRFGPKPAVIIGFLAYVVGGLLTAASVPTQSLPVLSLCLLLAGRLALGIGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH
SAVSTGAISWAMALFGAKETVRIIAWNGIATNASLAAAAPIGAWIASRYGFVAIGLVTVA
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
VALLGLILGLARPTVEIKVGAGMGAGHVFKIIAPYGFTLALAGAGFGVIMTFIVLYFESR
HHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCCCEEHHHCCCHHHHHHHHHHHHCCC
DWPHAPLALTTFSVAFMSLRFFLARAVTRFGGVPVARVALFLELGGFILLIVAAGPAMAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEHHCCHHHHH
LGTALAGFGYAAIFPSLGGEAIGRAPPQNRGVALGLYSMFQDVSLGATGPAAGILATHYG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCC
YASPFYLGIMAIALGLVVSFGLDPRKSTQA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SPSLIGTLRLVSVVAFTFLGFLAVGLPLAVLPTYVDRNLGLGAFWAGLAVSTLYISTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SRTHIGQMTDRFGPKPAVIIGFLAYVVGGLLTAASVPTQSLPVLSLCLLLAGRLALGIGE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCH
SAVSTGAISWAMALFGAKETVRIIAWNGIATNASLAAAAPIGAWIASRYGFVAIGLVTVA
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
VALLGLILGLARPTVEIKVGAGMGAGHVFKIIAPYGFTLALAGAGFGVIMTFIVLYFESR
HHHHHHHHHHCCCCEEEEECCCCCCCHHEEECCCCCCEEHHHCCCHHHHHHHHHHHHCCC
DWPHAPLALTTFSVAFMSLRFFLARAVTRFGGVPVARVALFLELGGFILLIVAAGPAMAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEHHCCHHHHH
LGTALAGFGYAAIFPSLGGEAIGRAPPQNRGVALGLYSMFQDVSLGATGPAAGILATHYG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHCC
YASPFYLGIMAIALGLVVSFGLDPRKSTQA
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]