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The map label for this gene is secY [H]

Identifier: 182678357

GI number: 182678357

Start: 1578931

End: 1580265

Strand: Direct

Name: secY [H]

Synonym: Bind_1374

Alternate gene names: 182678357

Gene position: 1578931-1580265 (Clockwise)

Preceding gene: 182678356

Following gene: 182678358

Centisome position: 37.86

GC content: 54.16

Gene sequence:

>1335_bases
ATGGTTTCGGCCGCGGAACAACTTGCATCCAATGTCAATTGGGGGGCCTTTTCTAAAGCCACCGAGCTCAAGCAACGCAT
CTGGTTTACCTTGGGCGCACTGATCATCTATCGGTTGGGAACGTATATTCCCTTGCCGGGCATTGATCCTGCGGCTTTCG
AGGCGAATTTTACCGGTAATCGGCAGGGTGTTCTCGAGCTTTTCAATATGTTCGCGGGCGGCGCCGTGCAGCGCATGGCC
ATTTTCGCCTTGAACATCATGCCGTATATTTCGGCCTCGATCATCATCCAGCTTTTGACCTCCGTGCTTCCTGCGCTGGA
AACCCTCAAGAAAGAGGGGGAGGCGGGCCGCAAGGTCATGAATCAATACACCCGTTACCTGACGGTGATTCTGGCGGCGT
TCCAAGCCTATGGCATAGCGGTCGGCCTCGAGAGCCAAGCGGGCGTCGTGACGGAACCTGGGTTCTTTTTCAGGATCAGC
ACCGTCTTGACCCTGATGGGTGGGACGATGTTTCTCATGTGGCTGGGCGAGCAGATCACCTCGCGCGGCATCGGCAATGG
ATCCTCGCTGATTATTTTCGCGGGTATTGTCGCGGCTTTCCCCTCGGCCATCCTCAACACTTTGGAACTCGGACGTCAGG
GAGCCATTTCAACCGGCGTGATTATCGGCGTCATCATCATGTCGATCGCGGTGATCGCCTTCATCGTCTTCATGGAAAGG
GCGCAGAGGCGCGTCCTGATCACTTATCCGAAGCGACAGCAAGGCAACCGTGTCTATGAAGGTCAGACGTCGTTCCTACC
TCTCAAGTTGAATACGTCTGGTGTGATCCCGCCAATTTTTGCCTCTTCCTTGCTGCTTTTGCCGACGACGATTGCCAATT
TCTCGCAGAATCAGGGTGGCACCGGTATTTTGGCGACGGTCTCGGCCTATCTCGCACACGGACGGCCGCTTTATATGGCT
GCCTATGTCGCCTTGATCGTTTTCTTCGCTTTCTTTTATACGGCAATCGTTTTCAATCCGGTGGAAACAGCTGATAATCT
CAAGAAGCACGGGGGATTCGTCCCGGGGATCAGGCCGGGAGAGAGGACAGCGCAATATATCGATACGATTCTCATGCGCA
TAACGGTGCTGGGCGCGGCCTATCTGGCAGTGATCTGTCTTTTGCCGGAAATCCTGATTTCCTATGCCGCGTTGCCGTTT
TATTTCGGAGGCACGTCGCTCTTGATCGTTGTCAGTGTCACCATGGATACAGTGGCCCAGATTCATGGACATCTGCAGGC
CCATCAGTATGAGGGTTTGATCAAGAAGGCAAAATTGCGGGGGAAACGGAAATGA

Upstream 100 bases:

>100_bases
TTTCGGACTTGATGCTGTATTTGAAATCAATGGTTCAACGCATGGACCCAGCCGCGACTTGTGGGAGGCGGGGAGGGGCC
ATGCCTCAGCGGAGCTTTCA

Downstream 100 bases:

>100_bases
GGCTTATTCTTTTGGGACCGCCTGGCGCTGGCAAGGGGACTCAATCGGAGCGTTTGCGGGAACAATGCAAAATCCCGCAG
CTTTCGACAGGTGATATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MVSAAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGNRQGVLELFNMFAGGAVQRMA
IFALNIMPYISASIIIQLLTSVLPALETLKKEGEAGRKVMNQYTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRIS
TVLTLMGGTMFLMWLGEQITSRGIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMER
AQRRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGGTGILATVSAYLAHGRPLYMA
AYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPGERTAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPF
YFGGTSLLIVVSVTMDTVAQIHGHLQAHQYEGLIKKAKLRGKRK

Sequences:

>Translated_444_residues
MVSAAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGNRQGVLELFNMFAGGAVQRMA
IFALNIMPYISASIIIQLLTSVLPALETLKKEGEAGRKVMNQYTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRIS
TVLTLMGGTMFLMWLGEQITSRGIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMER
AQRRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGGTGILATVSAYLAHGRPLYMA
AYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPGERTAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPF
YFGGTSLLIVVSVTMDTVAQIHGHLQAHQYEGLIKKAKLRGKRK
>Mature_444_residues
MVSAAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGNRQGVLELFNMFAGGAVQRMA
IFALNIMPYISASIIIQLLTSVLPALETLKKEGEAGRKVMNQYTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRIS
TVLTLMGGTMFLMWLGEQITSRGIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMER
AQRRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGGTGILATVSAYLAHGRPLYMA
AYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPGERTAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPF
YFGGTSLLIVVSVTMDTVAQIHGHLQAHQYEGLIKKAKLRGKRK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=56.5011820330969, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48154; Mature: 48154

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGN
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
RQGVLELFNMFAGGAVQRMAIFALNIMPYISASIIIQLLTSVLPALETLKKEGEAGRKVM
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRISTVLTLMGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMER
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGG
CCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TGILATVSAYLAHGRPLYMAAYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
ERTAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPFYFGGTSLLIVVSVTMDTVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHH
IHGHLQAHQYEGLIKKAKLRGKRK
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSAAEQLASNVNWGAFSKATELKQRIWFTLGALIIYRLGTYIPLPGIDPAAFEANFTGN
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCC
RQGVLELFNMFAGGAVQRMAIFALNIMPYISASIIIQLLTSVLPALETLKKEGEAGRKVM
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVILAAFQAYGIAVGLESQAGVVTEPGFFFRISTVLTLMGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGIGNGSSLIIFAGIVAAFPSAILNTLELGRQGAISTGVIIGVIIMSIAVIAFIVFMER
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQRRVLITYPKRQQGNRVYEGQTSFLPLKLNTSGVIPPIFASSLLLLPTTIANFSQNQGG
CCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
TGILATVSAYLAHGRPLYMAAYVALIVFFAFFYTAIVFNPVETADNLKKHGGFVPGIRPG
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
ERTAQYIDTILMRITVLGAAYLAVICLLPEILISYAALPFYFGGTSLLIVVSVTMDTVAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHEEHHHHHHHHH
IHGHLQAHQYEGLIKKAKLRGKRK
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA