| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is mnmG
Identifier: 182678269
GI number: 182678269
Start: 1492866
End: 1494722
Strand: Direct
Name: mnmG
Synonym: Bind_1285
Alternate gene names: 182678269
Gene position: 1492866-1494722 (Clockwise)
Preceding gene: 182678268
Following gene: 182678270
Centisome position: 35.8
GC content: 61.34
Gene sequence:
>1857_bases ATGAAAGGGACCTATGATGTCGTGGTGGTGGGCGGTGGCCATGCCGGCTGCGAGGCGGCGGCCGCCTCGGCGCGGCTCGG CGCGCGCACGGCTTTGGTCACCCAGGCCTTTGCCACGATCGGGTCCATGTCCTGCAATCCGGCGATTGGCGGTCTCGGCA AGGGGCATCTTGTGCGCGAGATCGACGCGCTTGACGGGTTGATGGGCCGTGTAGCGGATGCGGCGGGCATTCAGTTCAGG GTTCTCAATCGCGCCAAAGGTCCCGCCGTGCGCGGTCCACGCGCCCAGGCCGACCGCAAGCTCTACCGTGCCGCCATGCA GGCGGAAATCCAGGCCGTTAACGGCCTGGATGTGATTGAAGGCGAGGCCGAGGGGCTTTGCTTCGATGGCGAAAAGATCG CCGGCGTTCTTGTTGGAGTGGAAACCCTGGCCTGCGCCGCCGTGGTGCTGACGACGGGCACTTTTTTGCGCGGGCTGATC CATATCGGTGAAAAGCAGGTCCGGGCAGGACGGATTGGCGAGGCGCCCGCCGAGGCTATGGGGTTGGCCTTGGAAGCGCT CGGCCTCAGCATGGGCCGGCTGAAAACCGGCACGCCGGCGAGGCTTGATGGACGCAGCATCGATTGGAGCCGGCTCGAAC GCCAATCAGGCGATGTCGAGCCTGAGCCCTTTTCTTTTCTGACAGAAGCGATCACGCGACCGCAGGTCGATTGTTTCATC ACGACGACGACGCCGGAGACCCATGCGGTCATTCGCGAGAATCTGCATTATTCACCGGTCTATTCCGGCGCGATCAATGG GCGCGGCCCGCGTTATTGCCCCTCGATCGAGGACAAGGTCGTACGCTTTGCCGATCGTGAAGCGCATCAGATCTTTCTCG AGCCCGAAGGGCTCGATGTGCCGACGATCTATCCCAACGGCATTTCGACAGCTTTGCCAGAGTCTGTCCAGGAGCGCTTT TTGCGCACGATTCCGGGGCTCGAACATGTCGCCATTCTCCAGCATGGCTATGCGATCGAATATGATTATGTCGATCCGCG TGAATTGACGGCCGGCCTCGAGGTCAAGCGCGTGCCGGGCCTGTTCCTCGCTGGCCAGATCAATGGGACAACCGGCTATG AGGAAGCAGGCGCTCAAGGGCTCATCGCTGGACTGAACGCGGCTGCCCGGGCTGGCGGGCTCGCCCCCATCACCTTCGAC CGTTCGGAAGCCTATCTGGGGGTGATGATCGATGATCTCATCAATCGCGGCGTGTCCGAGCCTTATCGCATGTTTACCTC ACGGGCCGAATATCGTCTGACCTTGCGGGCCGACAATGCGGATCAAAGATTGACTGGCAAGGGGATGATTCTGGGTTGTA TTGGTCAGCAACGCGCCGAGATTTTCAAGGCGAAGAGCGAGGCATTGAATTCCGCGCGTGATCTGCTTGCGGGCTTGAGC CTCAGCCCCACTGAGGCAACGCGGCACGGCCTCAAGGTCAATCGCGACGGCGTCCGGCGCACGGCTTTTGATCTTCTGGC TCTTCCTGATGTGACACTTGAAACTTTGCGGTCTATCTGGCCAGAATTAAAGACAATTCCTGAGACTATCGCGGCACAGA TCGAAATCGACGCGCATTATGCCGTTTATCTCGACCGGCAAGAGGCCGATATCGCGGCTTTCCGCCGGGATGAGGGTTTG GCTCTGCCGACAGATCTCGATTATGCCTCCATGCAGGGGCTTTCCAATGAGATTCGTGGCCGTCTGGCGGCGATACGGCC CGCGACCTTGGGCCAGGCTGGTCGTATCGAAGGCATGACACCCACGGCGCTCACGCTTCTGGCGGCGCGTGTGCGGCGGG CTGGCGCTCACGCATGA
Upstream 100 bases:
>100_bases GGATCGAGACGGAAGAGATTTTGGGGGAAATTTTTGCGCGTTTCTGTATAGGAAAGTGAGCGCGGCAAATGGAAAGACTG AAACAAGGACGGCCGGACCG
Downstream 100 bases:
>100_bases AAGGCGTCAAAAAGCAGGTTCAGGGGCTGCCGGACCGCGGACCGGAAAGGCAGGCGGAAGAGGCGGCCATCGCCTCATCA ATGGCGCCGGAATTACGCGA
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MKGTYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFR VLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIEGEAEGLCFDGEKIAGVLVGVETLACAAVVLTTGTFLRGLI HIGEKQVRAGRIGEAPAEAMGLALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFI TTTTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDVPTIYPNGISTALPESVQERF LRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPGLFLAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFD RSEAYLGVMIDDLINRGVSEPYRMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLS LSPTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHYAVYLDRQEADIAAFRRDEGL ALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMTPTALTLLAARVRRAGAHA
Sequences:
>Translated_618_residues MKGTYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFR VLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIEGEAEGLCFDGEKIAGVLVGVETLACAAVVLTTGTFLRGLI HIGEKQVRAGRIGEAPAEAMGLALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFI TTTTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDVPTIYPNGISTALPESVQERF LRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPGLFLAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFD RSEAYLGVMIDDLINRGVSEPYRMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLS LSPTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHYAVYLDRQEADIAAFRRDEGL ALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMTPTALTLLAARVRRAGAHA >Mature_618_residues MKGTYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFR VLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIEGEAEGLCFDGEKIAGVLVGVETLACAAVVLTTGTFLRGLI HIGEKQVRAGRIGEAPAEAMGLALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFI TTTTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDVPTIYPNGISTALPESVQERF LRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPGLFLAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFD RSEAYLGVMIDDLINRGVSEPYRMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLS LSPTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHYAVYLDRQEADIAAFRRDEGL ALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMTPTALTLLAARVRRAGAHA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=630, Percent_Identity=46.031746031746, Blast_Score=508, Evalue=1e-144, Organism=Homo sapiens, GI19882217, Length=655, Percent_Identity=44.2748091603053, Blast_Score=494, Evalue=1e-139, Organism=Homo sapiens, GI183227703, Length=670, Percent_Identity=43.2835820895522, Blast_Score=489, Evalue=1e-138, Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=50.0802568218299, Blast_Score=571, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17534255, Length=615, Percent_Identity=45.0406504065041, Blast_Score=505, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6321202, Length=631, Percent_Identity=49.1283676703645, Blast_Score=563, Evalue=1e-161, Organism=Drosophila melanogaster, GI24658174, Length=630, Percent_Identity=47.9365079365079, Blast_Score=551, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_BEII9 (B2IJQ4)
Other databases:
- EMBL: CP001016 - RefSeq: YP_001832415.1 - ProteinModelPortal: B2IJQ4 - SMR: B2IJQ4 - GeneID: 6201797 - GenomeReviews: CP001016_GR - KEGG: bid:Bind_1285 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 66136; Mature: 66136
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVRE CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IDALDGLMGRVADAAGIQFRVLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEC GEAEGLCFDGEKIAGVLVGVETLACAAVVLTTGTFLRGLIHIGEKQVRAGRIGEAPAEAM CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHH GLALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFI HHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE TTTTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDV EECCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC PTIYPNGISTALPESVQERFLRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPG CEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCHHHHHCCCEEECCCC LFLAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFDRSEAYLGVMIDDLINRGVSE EEEEEEECCCCCCHHCCCCHHHHHCCHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCCH PYRMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLS HHHHHHCCCEEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC LSPTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHY CCCCHHHHCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCEE AVYLDRQEADIAAFRRDEGLALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMT EEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHCCCCCCCCCCC PTALTLLAARVRRAGAHA HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKGTYDVVVVGGGHAGCEAAAASARLGARTALVTQAFATIGSMSCNPAIGGLGKGHLVRE CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IDALDGLMGRVADAAGIQFRVLNRAKGPAVRGPRAQADRKLYRAAMQAEIQAVNGLDVIE HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEC GEAEGLCFDGEKIAGVLVGVETLACAAVVLTTGTFLRGLIHIGEKQVRAGRIGEAPAEAM CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHH GLALEALGLSMGRLKTGTPARLDGRSIDWSRLERQSGDVEPEPFSFLTEAITRPQVDCFI HHHHHHHCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE TTTTPETHAVIRENLHYSPVYSGAINGRGPRYCPSIEDKVVRFADREAHQIFLEPEGLDV EECCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC PTIYPNGISTALPESVQERFLRTIPGLEHVAILQHGYAIEYDYVDPRELTAGLEVKRVPG CEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEECCCCHHHHHCCCEEECCCC LFLAGQINGTTGYEEAGAQGLIAGLNAAARAGGLAPITFDRSEAYLGVMIDDLINRGVSE EEEEEEECCCCCCHHCCCCHHHHHCCHHHHCCCCCEEEECCCCCEEHHHHHHHHHCCCCH PYRMFTSRAEYRLTLRADNADQRLTGKGMILGCIGQQRAEIFKAKSEALNSARDLLAGLS HHHHHHCCCEEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC LSPTEATRHGLKVNRDGVRRTAFDLLALPDVTLETLRSIWPELKTIPETIAAQIEIDAHY CCCCHHHHCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCEE AVYLDRQEADIAAFRRDEGLALPTDLDYASMQGLSNEIRGRLAAIRPATLGQAGRIEGMT EEEEECCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCHHCCCCCCCCCCC PTALTLLAARVRRAGAHA HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA