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The map label for this gene is hoxK [H]

Identifier: 182678135

GI number: 182678135

Start: 1333335

End: 1334411

Strand: Direct

Name: hoxK [H]

Synonym: Bind_1150

Alternate gene names: 182678135

Gene position: 1333335-1334411 (Clockwise)

Preceding gene: 182678133

Following gene: 182678136

Centisome position: 31.97

GC content: 57.1

Gene sequence:

>1077_bases
ATGGCTGCGCTCGAAACGTTCTATGAGGTGATGCGCAGACAGGGCATCACGCGCCGGTCTTTCATCAAATATTGTTCTCT
GACAGCGGCGGCCCTGGGTTTGGGTCCCGATTATATTCCGCAAATCGCCCATGCGATGGAAACGAAACCGCGCACGCCGG
TTTTGTGGCTGCATGGCTTGGAATGCACCTGCTGTTCAGAAAGCTTCATCCGTTCCGCGCATCCGCTCGTCAAGGATGTC
GTCCTGTCGATGATTTCACTCGATTATGATGACACGCTGATGGCGTCGGCCGGTCATCAGGCGGAAGCCATTCTCGATGA
AGTCACCGAGAAATATAAAGGCAATTACATTCTTGCCGTCGAAGGCAATCCGCCACTGAATGAAGACGGCATGTATTGCA
TCATCGGTGGTCGTCCCTTCGTGGAACAATTGCGCCGCGTCGCCAAGGACGCGAAGGCGATCATTTCCTGGGGCTCTTGC
GCCTCCTATGGCTGTGTCCAGGCGGCGGCTCCCAATCCGACGCAGGCAACGCCGGTGCATAAAGTCGTTCTCGACAAGCC
CATCATAAAAGTGCCGGGCTGTCCGCCGATTGCTGAAGTCATGACCGGTGTCATCACTTATATGCTGACCTTCGATCGGA
TACCGGAGCTCGATCGGCAGGGCCGGCCGAAAATGTTCTACTCACAGCGCATCCATGACAAATGCTATCGCCGGCCGCAT
TTCGATGCCGGGCAATATGTCGAGGCCTTTGACGATGAAGGCGCGCGCAAGGGACATTGCCTCTACAAGGTCGGCTGCAA
GGGACCAACGACCTATAATGCCTGTTCCACCACGCGTTGGAATGATGGCGTATCCTTTCCGATTCAGTCCGGCCATGGTT
GTATCGGTTGCTCCGAGGATGGTTTCTGGGACAAGGGTTCCTGGTATGCCCGTCTGAAGGATGTCAGCGGGTTCGGCATC
GAGGCGAGCGCCGATCGTATCGGCTTGACCGCCGCCGCCGCCGTCGGCACGGGTCTCGCGGTCCATGCAGCCATCAGCGC
CTTGCAGCGCGCGCGTTACAAAGGGGATGACGTTTAA

Upstream 100 bases:

>100_bases
CTCGATATTGTGCGGTCGGATGGGCGACGGTTGAACCGACAGCAGTCGGGTCGGCCACGGCCTGTCAGGATCTGTGTTTT
TGGAAAGGGGAGCGCCATCA

Downstream 100 bases:

>100_bases
TGAATGTGCAGACGCCGAACGGGTTTACCCTGGACAATTCCGGCAGGCGCATTGTCGTCGATCCCTTGACCCGCATCGAA
GGCCATATGCGGTGCGAGGT

Product: hydrogenase (NiFe) small subunit HydA

Products: NA

Alternate protein names: Hydrogenlyase; Membrane-bound hydrogenase small subunit [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MAALETFYEVMRRQGITRRSFIKYCSLTAAALGLGPDYIPQIAHAMETKPRTPVLWLHGLECTCCSESFIRSAHPLVKDV
VLSMISLDYDDTLMASAGHQAEAILDEVTEKYKGNYILAVEGNPPLNEDGMYCIIGGRPFVEQLRRVAKDAKAIISWGSC
ASYGCVQAAAPNPTQATPVHKVVLDKPIIKVPGCPPIAEVMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPH
FDAGQYVEAFDDEGARKGHCLYKVGCKGPTTYNACSTTRWNDGVSFPIQSGHGCIGCSEDGFWDKGSWYARLKDVSGFGI
EASADRIGLTAAAAVGTGLAVHAAISALQRARYKGDDV

Sequences:

>Translated_358_residues
MAALETFYEVMRRQGITRRSFIKYCSLTAAALGLGPDYIPQIAHAMETKPRTPVLWLHGLECTCCSESFIRSAHPLVKDV
VLSMISLDYDDTLMASAGHQAEAILDEVTEKYKGNYILAVEGNPPLNEDGMYCIIGGRPFVEQLRRVAKDAKAIISWGSC
ASYGCVQAAAPNPTQATPVHKVVLDKPIIKVPGCPPIAEVMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPH
FDAGQYVEAFDDEGARKGHCLYKVGCKGPTTYNACSTTRWNDGVSFPIQSGHGCIGCSEDGFWDKGSWYARLKDVSGFGI
EASADRIGLTAAAAVGTGLAVHAAISALQRARYKGDDV
>Mature_357_residues
AALETFYEVMRRQGITRRSFIKYCSLTAAALGLGPDYIPQIAHAMETKPRTPVLWLHGLECTCCSESFIRSAHPLVKDVV
LSMISLDYDDTLMASAGHQAEAILDEVTEKYKGNYILAVEGNPPLNEDGMYCIIGGRPFVEQLRRVAKDAKAIISWGSCA
SYGCVQAAAPNPTQATPVHKVVLDKPIIKVPGCPPIAEVMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPHF
DAGQYVEAFDDEGARKGHCLYKVGCKGPTTYNACSTTRWNDGVSFPIQSGHGCIGCSEDGFWDKGSWYARLKDVSGFGIE
ASADRIGLTAAAAVGTGLAVHAAISALQRARYKGDDV

Specific function: This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions [H]

COG id: COG1740

COG function: function code C; Ni,Fe-hydrogenase I small subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

Organism=Escherichia coli, GI1787206, Length=331, Percent_Identity=70.0906344410876, Blast_Score=518, Evalue=1e-148,
Organism=Escherichia coli, GI1789371, Length=294, Percent_Identity=43.1972789115646, Blast_Score=267, Evalue=9e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR001821
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.12.99.6 [H]

Molecular weight: Translated: 39200; Mature: 39069

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALETFYEVMRRQGITRRSFIKYCSLTAAALGLGPDYIPQIAHAMETKPRTPVLWLHGL
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSAHPLVKDVVLSMISLDYDDTLMASAGHQAEAILDEVTEKYKGNYILAV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEE
EGNPPLNEDGMYCIIGGRPFVEQLRRVAKDAKAIISWGSCASYGCVQAAAPNPTQATPVH
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHH
KVVLDKPIIKVPGCPPIAEVMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPH
HHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
FDAGQYVEAFDDEGARKGHCLYKVGCKGPTTYNACSTTRWNDGVSFPIQSGHGCIGCSED
CCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GFWDKGSWYARLKDVSGFGIEASADRIGLTAAAAVGTGLAVHAAISALQRARYKGDDV
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AALETFYEVMRRQGITRRSFIKYCSLTAAALGLGPDYIPQIAHAMETKPRTPVLWLHGL
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECC
ECTCCSESFIRSAHPLVKDVVLSMISLDYDDTLMASAGHQAEAILDEVTEKYKGNYILAV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEE
EGNPPLNEDGMYCIIGGRPFVEQLRRVAKDAKAIISWGSCASYGCVQAAAPNPTQATPVH
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCHH
KVVLDKPIIKVPGCPPIAEVMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPH
HHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
FDAGQYVEAFDDEGARKGHCLYKVGCKGPTTYNACSTTRWNDGVSFPIQSGHGCIGCSED
CCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
GFWDKGSWYARLKDVSGFGIEASADRIGLTAAAAVGTGLAVHAAISALQRARYKGDDV
CCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488; 2493816 [H]