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The map label for this gene is yjgB [H]

Identifier: 182678129

GI number: 182678129

Start: 1323900

End: 1324901

Strand: Direct

Name: yjgB [H]

Synonym: Bind_1144

Alternate gene names: 182678129

Gene position: 1323900-1324901 (Clockwise)

Preceding gene: 182678125

Following gene: 182678130

Centisome position: 31.75

GC content: 59.58

Gene sequence:

>1002_bases
ATGATCAAGGCATGGGCGGCGCGAACTCCTAAGGGAAAGCTTGAAAAGTTCGATTTCGATCCAGGTCCGTTGAAGGGCGA
CGAAGTCGAGATCGCTGTCGAACATTGCGGCATTTGCCATTCGGACCTCTCGGTGATCGATAATGAATGGGGCGTGTCCT
CTTACCCGGCTGTGCCCGGGCATGAGGTGATCGGCCAAGTTGTCGCGCTTGGCACGGAGACCCGTGGCTTACGGGTTGGC
CAGCGCGTCGGTCTCGGCTGGACCGCCGGCAGCTGCCTGCATTGCCATGAATGCCTCAGTGGTGATCAGCATCTTTGCGC
GGAATCCGTCGCGACGATCGTTGGCCATGCGGGAGGCTTCGCCAATCGCGTCCGGGCGCAATGGCCCTGGGTGATTCATC
TCCCTGAAGGGCTCGACCCAAGGGAAGCGGGACCGCTGCTTTGCGGCGGCGTGACGGTATTTTCTCCGCTACAGACTTAC
GGGATCAAACCGACAGACAAAGTGGGTATCGTTGGCATTGGCGGTCTCGGTCATCTGGCGGTGAAATTCGCCGCGGCCTG
GGGGTGCGAGGTGACGGCCTTCACCTCGTCGGCATCAAAGGAAGCGGAAGCCCGGGGTTTTGGTGCCCATCGCGTGGTGA
ACAGCAAAGATCCCGCGGCGATCGCGGCGATTGCTGGTTCTCTCGATCTGGTGATCGTGACGGTCAATGTGCCGCTCGAT
TGGAAAGCGCTGCTCGCGACTTTGCGTCCCAAAGGGCGGCTGCATTTTGTTGGCGCGGTGCTGGAGCCCGTTCCTATCGA
AGCTTTCGCTTTGATTTCTGGCCAGCGGAGTGTGTCTGGTTCTCCGACTGGCTCTCCCGTGACCATTGCCTCCATGCTGG
AATTTGCCGCGCGTCACAAAATTCTGCCGCAGACGGAGCATTTTCCCATCGCGCAAGTGAACGAAGCGCTTGATCATTTG
CGGGCCGGCAAGGCGCGCTATCGGGTCATTCTTGATATGTGA

Upstream 100 bases:

>100_bases
AGGCGAGGAATGTTGGTGGCAAGGGGGTGTGAAGGCAAGATACCATCCAGAATGGCGATGATTCGGTGTTGCTCGAACGC
CGGAAGAAGGGCTTAAGCGT

Downstream 100 bases:

>100_bases
AAGGGAGGAATGCTCTGGCGCATGTCCAAACATTCAGGGCATTGGACATGAACGTTCAGTGCTTTGGAACCGGATCGGGG
CCGCCTGGCGATCAAGTGTC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIKAWAARTPKGKLEKFDFDPGPLKGDEVEIAVEHCGICHSDLSVIDNEWGVSSYPAVPGHEVIGQVVALGTETRGLRVG
QRVGLGWTAGSCLHCHECLSGDQHLCAESVATIVGHAGGFANRVRAQWPWVIHLPEGLDPREAGPLLCGGVTVFSPLQTY
GIKPTDKVGIVGIGGLGHLAVKFAAAWGCEVTAFTSSASKEAEARGFGAHRVVNSKDPAAIAAIAGSLDLVIVTVNVPLD
WKALLATLRPKGRLHFVGAVLEPVPIEAFALISGQRSVSGSPTGSPVTIASMLEFAARHKILPQTEHFPIAQVNEALDHL
RAGKARYRVILDM

Sequences:

>Translated_333_residues
MIKAWAARTPKGKLEKFDFDPGPLKGDEVEIAVEHCGICHSDLSVIDNEWGVSSYPAVPGHEVIGQVVALGTETRGLRVG
QRVGLGWTAGSCLHCHECLSGDQHLCAESVATIVGHAGGFANRVRAQWPWVIHLPEGLDPREAGPLLCGGVTVFSPLQTY
GIKPTDKVGIVGIGGLGHLAVKFAAAWGCEVTAFTSSASKEAEARGFGAHRVVNSKDPAAIAAIAGSLDLVIVTVNVPLD
WKALLATLRPKGRLHFVGAVLEPVPIEAFALISGQRSVSGSPTGSPVTIASMLEFAARHKILPQTEHFPIAQVNEALDHL
RAGKARYRVILDM
>Mature_333_residues
MIKAWAARTPKGKLEKFDFDPGPLKGDEVEIAVEHCGICHSDLSVIDNEWGVSSYPAVPGHEVIGQVVALGTETRGLRVG
QRVGLGWTAGSCLHCHECLSGDQHLCAESVATIVGHAGGFANRVRAQWPWVIHLPEGLDPREAGPLLCGGVTVFSPLQTY
GIKPTDKVGIVGIGGLGHLAVKFAAAWGCEVTAFTSSASKEAEARGFGAHRVVNSKDPAAIAAIAGSLDLVIVTVNVPLD
WKALLATLRPKGRLHFVGAVLEPVPIEAFALISGQRSVSGSPTGSPVTIASMLEFAARHKILPQTEHFPIAQVNEALDHL
RAGKARYRVILDM

Specific function: Unknown

COG id: COG1064

COG function: function code R; Zn-dependent alcohol dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI87082401, Length=333, Percent_Identity=55.5555555555556, Blast_Score=368, Evalue=1e-103,
Organism=Escherichia coli, GI1786518, Length=347, Percent_Identity=36.8876080691643, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI87081918, Length=314, Percent_Identity=28.9808917197452, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1790045, Length=323, Percent_Identity=24.4582043343653, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788407, Length=243, Percent_Identity=30.8641975308642, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788073, Length=295, Percent_Identity=25.4237288135593, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788075, Length=338, Percent_Identity=24.5562130177515, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI226510992, Length=157, Percent_Identity=30.5732484076433, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71988145, Length=310, Percent_Identity=29.0322580645161, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17562584, Length=323, Percent_Identity=27.8637770897833, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17562582, Length=337, Percent_Identity=26.7062314540059, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323980, Length=332, Percent_Identity=31.9277108433735, Blast_Score=151, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319949, Length=329, Percent_Identity=32.8267477203647, Blast_Score=148, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6323729, Length=334, Percent_Identity=28.7425149700599, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6324486, Length=329, Percent_Identity=27.9635258358663, Blast_Score=123, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323961, Length=341, Percent_Identity=28.1524926686217, Blast_Score=121, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6319621, Length=341, Percent_Identity=28.4457478005865, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR002328
- InterPro:   IPR006140
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 35220; Mature: 35220

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00065 D_2_HYDROXYACID_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKAWAARTPKGKLEKFDFDPGPLKGDEVEIAVEHCGICHSDLSVIDNEWGVSSYPAVPG
CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEHHHCCCCCCCHHHHCCCCCCCCCCCCCC
HEVIGQVVALGTETRGLRVGQRVGLGWTAGSCLHCHECLSGDQHLCAESVATIVGHAGGF
HHHHHHHHHCCCCCCCEECCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
ANRVRAQWPWVIHLPEGLDPREAGPLLCGGVTVFSPLQTYGIKPTDKVGIVGIGGLGHLA
HHHHHCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
VKFAAAWGCEVTAFTSSASKEAEARGFGAHRVVNSKDPAAIAAIAGSLDLVIVTVNVPLD
HHHHHHCCCEEEEECCCCCCHHHHCCCCCCEECCCCCCCEEEEECCCCEEEEEEEECCCC
WKALLATLRPKGRLHFVGAVLEPVPIEAFALISGQRSVSGSPTGSPVTIASMLEFAARHK
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC
ILPQTEHFPIAQVNEALDHLRAGKARYRVILDM
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MIKAWAARTPKGKLEKFDFDPGPLKGDEVEIAVEHCGICHSDLSVIDNEWGVSSYPAVPG
CCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEHHHCCCCCCCHHHHCCCCCCCCCCCCCC
HEVIGQVVALGTETRGLRVGQRVGLGWTAGSCLHCHECLSGDQHLCAESVATIVGHAGGF
HHHHHHHHHCCCCCCCEECCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCH
ANRVRAQWPWVIHLPEGLDPREAGPLLCGGVTVFSPLQTYGIKPTDKVGIVGIGGLGHLA
HHHHHCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCEEEEEECCHHHHH
VKFAAAWGCEVTAFTSSASKEAEARGFGAHRVVNSKDPAAIAAIAGSLDLVIVTVNVPLD
HHHHHHCCCEEEEECCCCCCHHHHCCCCCCEECCCCCCCEEEEECCCCEEEEEEEECCCC
WKALLATLRPKGRLHFVGAVLEPVPIEAFALISGQRSVSGSPTGSPVTIASMLEFAARHK
HHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC
ILPQTEHFPIAQVNEALDHLRAGKARYRVILDM
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]