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The map label for this gene is yjbQ [C]

Identifier: 182678109

GI number: 182678109

Start: 1303813

End: 1304235

Strand: Direct

Name: yjbQ [C]

Synonym: Bind_1124

Alternate gene names: 182678109

Gene position: 1303813-1304235 (Clockwise)

Preceding gene: 182678108

Following gene: 182678111

Centisome position: 31.27

GC content: 56.26

Gene sequence:

>423_bases
ATGCTGCGTCAGGCGACACAGAGGCTCGATATCGCGACCCAGGGCAGAGGGCTCATCGCCTTCACGGATTCCGTGCGGAA
CTGGCTGCATGGAGAGCATTTTACAACTGGGCTTTTGACTGTGTTCTGCCGGCATACATCGGCTTCTCTTTTGATTCAGG
AAAATGCGGATCCCGATGTCTGTCGGGATCTGATCCGTTTCTTCGACGTGATCGCGCCAGAAGATGAGACGCGCTACATT
CATCGAGCTGAAGGACCCGATGACATGCCGGCTCATATTCGTTCAGCGCTGACCGCTACGCAGCTTTCCATTCCAATCGT
CGAAGGCAGGCTGGTGCTTGGCACGTGGCAGGGGCTTTATCTCTTTGAGCACCGCCGTGCGCCCCATCGCCGCGAGATCG
TGCTGCATGTGATCGGTGAATAA

Upstream 100 bases:

>100_bases
CGCGGCGCAAAGGCATGAGCATTGCGGAGGTCGAACGCTGGCTGACACCGATCCTCAATTACAATCCAGCGGCCGTGGCT
GAGGCGGCGGAGTAGGGTCC

Downstream 100 bases:

>100_bases
CGAGCGGCAAGCTGATCGCAAGCTCTTCCAAGATGCCAATAATTCTATTGCTTTCCGATTTCGAAAATTCGTGTTTCGGC
TGGACCAACGTGAAACTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLRQATQRLDIATQGRGLIAFTDSVRNWLHGEHFTTGLLTVFCRHTSASLLIQENADPDVCRDLIRFFDVIAPEDETRYI
HRAEGPDDMPAHIRSALTATQLSIPIVEGRLVLGTWQGLYLFEHRRAPHRREIVLHVIGE

Sequences:

>Translated_140_residues
MLRQATQRLDIATQGRGLIAFTDSVRNWLHGEHFTTGLLTVFCRHTSASLLIQENADPDVCRDLIRFFDVIAPEDETRYI
HRAEGPDDMPAHIRSALTATQLSIPIVEGRLVLGTWQGLYLFEHRRAPHRREIVLHVIGE
>Mature_140_residues
MLRQATQRLDIATQGRGLIAFTDSVRNWLHGEHFTTGLLTVFCRHTSASLLIQENADPDVCRDLIRFFDVIAPEDETRYI
HRAEGPDDMPAHIRSALTATQLSIPIVEGRLVLGTWQGLYLFEHRRAPHRREIVLHVIGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=135, Percent_Identity=41.4814814814815, Blast_Score=100, Evalue=3e-23,
Organism=Drosophila melanogaster, GI221476594, Length=134, Percent_Identity=40.2985074626866, Blast_Score=104, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221476589, Length=134, Percent_Identity=40.2985074626866, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15977; Mature: 15977

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRQATQRLDIATQGRGLIAFTDSVRNWLHGEHFTTGLLTVFCRHTSASLLIQENADPDV
CCCCHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHH
CRDLIRFFDVIAPEDETRYIHRAEGPDDMPAHIRSALTATQLSIPIVEGRLVLGTWQGLY
HHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHEECEEECCEEEEEECCCEE
LFEHRRAPHRREIVLHVIGE
EEECCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLRQATQRLDIATQGRGLIAFTDSVRNWLHGEHFTTGLLTVFCRHTSASLLIQENADPDV
CCCCHHHHCCCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCHHH
CRDLIRFFDVIAPEDETRYIHRAEGPDDMPAHIRSALTATQLSIPIVEGRLVLGTWQGLY
HHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHEECEEECCEEEEEECCCEE
LFEHRRAPHRREIVLHVIGE
EEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]