Click here to switch to the map view.

The map label for this gene is ybeZ [C]

Identifier: 182678042

GI number: 182678042

Start: 1212596

End: 1213621

Strand: Direct

Name: ybeZ [C]

Synonym: Bind_1056

Alternate gene names: 182678042

Gene position: 1212596-1213621 (Clockwise)

Preceding gene: 182678041

Following gene: 182678043

Centisome position: 29.08

GC content: 60.72

Gene sequence:

>1026_bases
ATGCCGGCCCTTCCTTCAGGAGAGCCGACGGCCGAGATGACCCTCGCCTTTGACGATAATCGTTATGCCTTATTGGTCTT
TGGCCAATATGACCAGAACATTGCCAAGGTTGAACGCCGCCTGGGTGTCAGCGCTCATGCCAATGGCAATCATATTACCA
TCAAGGGGCCGCAAGGCGCTTGTGAGCAGGCCCGCCGCGTGTTCGAATCGCTTTATGCGCGGGTCAAGCTCGGCCATCCG
ATCAGCCTTGGTGATGTCGATGGCGCGATCGAGGAAGGCGTGGTGCAAGGCAGCTTGTTTCCAGGCGAGAGCGAGGTCGG
TCGCCCGGTTTTTGAACAGATCGCGACGCGGCGACGTGGCCCGGTGCGCGCCCGCACGGCCGCCCAGGATTATTACTTGC
GAACTTTGAAACAATCGGAGCTGGTTTTCGCCGAGGGACCGGCCGGCACGGGCAAGACGTGGCTCGCCGTGGGTTTTGCT
GTGTCTCTCCTCGAACAAGGCCGTGTCGATCGGCTGATCCTGTCGCGGCCTGCCGTCGAAGCGGGTGAGCGTCTGGGCTT
TCTGCCGGGCGATATGCGCGACAAGGTCGATCCTTATCTGCGGCCGATCTTCGATGCCTTGAATGATTTCATGGACCCTC
GCCTCCTGGAGCGGGGCATGCAGACTGGTATGATCGAGGTGGCGCCGCTTGCCTTCATGCGCGGGCGCACTTTGAGCAAT
GCCTGCGTCTTGCTCGACGAGGCGCAGAACGCGACCTCGATCCAGATGAAGATGTTTCTGACGAGACTGGGTGAAAATTC
GCGCATGATCGTCACCGGCGATCCGACCCAGACCGATCTGCCGTCCACGCAGAAATCCGGCCTGAGCGAGGCGATCAACC
TTTTGTCGGAGCTTGAAGGCGTGGGGCACGTCGTTTTTCGCGAAGGCGATGTCGTGCGGCATGATCTGGTGCGCCGTATC
GTCGGCGCTTATGAAGCCGCGTCGCGCGGCGACAACGAGTCGGCAAGACCCATCGGGAGAGCATGA

Upstream 100 bases:

>100_bases
GGATGGAGCGAATGGAGCAAAATGCTCGGGCTTGGGAGGTGCCGGTTTGAGATTCTCCGACCGATCCGCTTCTCTCCCAC
GCGGCGAGGCCAAGCGGCAA

Downstream 100 bases:

>100_bases
CCCGGGAGAGTTTATCATGGTACCGCTGATCGATATCGCGGTCGAAAGTCCCCGCTGGACCGAAGCGGGAAATGAGGGAG
AGGACCCGCTTTCTCTCGAC

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MPALPSGEPTAEMTLAFDDNRYALLVFGQYDQNIAKVERRLGVSAHANGNHITIKGPQGACEQARRVFESLYARVKLGHP
ISLGDVDGAIEEGVVQGSLFPGESEVGRPVFEQIATRRRGPVRARTAAQDYYLRTLKQSELVFAEGPAGTGKTWLAVGFA
VSLLEQGRVDRLILSRPAVEAGERLGFLPGDMRDKVDPYLRPIFDALNDFMDPRLLERGMQTGMIEVAPLAFMRGRTLSN
ACVLLDEAQNATSIQMKMFLTRLGENSRMIVTGDPTQTDLPSTQKSGLSEAINLLSELEGVGHVVFREGDVVRHDLVRRI
VGAYEAASRGDNESARPIGRA

Sequences:

>Translated_341_residues
MPALPSGEPTAEMTLAFDDNRYALLVFGQYDQNIAKVERRLGVSAHANGNHITIKGPQGACEQARRVFESLYARVKLGHP
ISLGDVDGAIEEGVVQGSLFPGESEVGRPVFEQIATRRRGPVRARTAAQDYYLRTLKQSELVFAEGPAGTGKTWLAVGFA
VSLLEQGRVDRLILSRPAVEAGERLGFLPGDMRDKVDPYLRPIFDALNDFMDPRLLERGMQTGMIEVAPLAFMRGRTLSN
ACVLLDEAQNATSIQMKMFLTRLGENSRMIVTGDPTQTDLPSTQKSGLSEAINLLSELEGVGHVVFREGDVVRHDLVRRI
VGAYEAASRGDNESARPIGRA
>Mature_340_residues
PALPSGEPTAEMTLAFDDNRYALLVFGQYDQNIAKVERRLGVSAHANGNHITIKGPQGACEQARRVFESLYARVKLGHPI
SLGDVDGAIEEGVVQGSLFPGESEVGRPVFEQIATRRRGPVRARTAAQDYYLRTLKQSELVFAEGPAGTGKTWLAVGFAV
SLLEQGRVDRLILSRPAVEAGERLGFLPGDMRDKVDPYLRPIFDALNDFMDPRLLERGMQTGMIEVAPLAFMRGRTLSNA
CVLLDEAQNATSIQMKMFLTRLGENSRMIVTGDPTQTDLPSTQKSGLSEAINLLSELEGVGHVVFREGDVVRHDLVRRIV
GAYEAASRGDNESARPIGRA

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=328, Percent_Identity=44.2073170731707, Blast_Score=247, Evalue=7e-67,
Organism=Escherichia coli, GI1787257, Length=211, Percent_Identity=47.8672985781991, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 37277; Mature: 37146

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALPSGEPTAEMTLAFDDNRYALLVFGQYDQNIAKVERRLGVSAHANGNHITIKGPQGA
CCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCEEECCCCEEEEECCCCH
CEQARRVFESLYARVKLGHPISLGDVDGAIEEGVVQGSLFPGESEVGRPVFEQIATRRRG
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEECCCCCCCHHCCCHHHHHHHHHCCC
PVRARTAAQDYYLRTLKQSELVFAEGPAGTGKTWLAVGFAVSLLEQGRVDRLILSRPAVE
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHH
AGERLGFLPGDMRDKVDPYLRPIFDALNDFMDPRLLERGMQTGMIEVAPLAFMRGRTLSN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
ACVLLDEAQNATSIQMKMFLTRLGENSRMIVTGDPTQTDLPSTQKSGLSEAINLLSELEG
EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
VGHVVFREGDVVRHDLVRRIVGAYEAASRGDNESARPIGRA
CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PALPSGEPTAEMTLAFDDNRYALLVFGQYDQNIAKVERRLGVSAHANGNHITIKGPQGA
CCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCEEECCCCEEEEECCCCH
CEQARRVFESLYARVKLGHPISLGDVDGAIEEGVVQGSLFPGESEVGRPVFEQIATRRRG
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEECCCCCCCHHCCCHHHHHHHHHCCC
PVRARTAAQDYYLRTLKQSELVFAEGPAGTGKTWLAVGFAVSLLEQGRVDRLILSRPAVE
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHH
AGERLGFLPGDMRDKVDPYLRPIFDALNDFMDPRLLERGMQTGMIEVAPLAFMRGRTLSN
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
ACVLLDEAQNATSIQMKMFLTRLGENSRMIVTGDPTQTDLPSTQKSGLSEAINLLSELEG
EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
VGHVVFREGDVVRHDLVRRIVGAYEAASRGDNESARPIGRA
CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]