| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is bcp [H]
Identifier: 182678040
GI number: 182678040
Start: 1210280
End: 1210846
Strand: Direct
Name: bcp [H]
Synonym: Bind_1054
Alternate gene names: 182678040
Gene position: 1210280-1210846 (Clockwise)
Preceding gene: 182678039
Following gene: 182678041
Centisome position: 29.02
GC content: 56.44
Gene sequence:
>567_bases ATGAAAAGGTCGATGCCGAGATTTTGCCTGTCCTTATCCTTATCCTTGGTCGTGGCGCTTATCGCCGCCTCGCCGGCGTT TGCCAGCCTCAAGATCGGAACGCGGGCACCAGATTTTACGGTTCCGGCGGCACGGGCTGGGCAAGTCTTCACCTTTTCCC TGGCTGAGGCTTTGCAGCGCGGACCAGTGGTTGTTTATTTTTATCCAGCCGCTTTCACGTCGGGCTGCACCGTGGAGGCG CATGATTTCGCCGAGGCGATGAACGATTTCGAGGCCCTGGGCGCGACTGTCATCGGCGTCTCGCATGATGCGATCGATAC GCTCTCCAAATTTTCCGTCAGCGAATGCCGCGGCAAATTCCCAGTGGCGGCGGATGTGGATCAGGCCGTTATGAAAAATT ACGATTCCGTTCTCATCCGTAATCCGTTGCTGGCCGAGAGAACCTCATACGTCATCGCGCCGGATGGAACGATTCTCGCT GTCTATAGTAATTCCGATCCGAGTGAACATGTCGGCAAGATGCTGGCGGCGCTCAAGGCATGGAAGGCGAAAAGCCCTGT TCCCTGA
Upstream 100 bases:
>100_bases CAAGCTCTTTTCGTTCAAAGGGAATAGAAAACGTCTCAGGGCATGAGGCCATTCTTGACCGTTGGTATGAGGACGGCATT GCGCGAGAGCTTATACAGTC
Downstream 100 bases:
>100_bases ATGAATGACTGGATTGGACTGTTTTGGGAAAATGGCCTAAGATAAATTTTGTGAGAAAGTGCTCGGCCTCTGGATGAGGC AAAGCAGTGAGGCCTGAGAG
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKRSMPRFCLSLSLSLVVALIAASPAFASLKIGTRAPDFTVPAARAGQVFTFSLAEALQRGPVVVYFYPAAFTSGCTVEA HDFAEAMNDFEALGATVIGVSHDAIDTLSKFSVSECRGKFPVAADVDQAVMKNYDSVLIRNPLLAERTSYVIAPDGTILA VYSNSDPSEHVGKMLAALKAWKAKSPVP
Sequences:
>Translated_188_residues MKRSMPRFCLSLSLSLVVALIAASPAFASLKIGTRAPDFTVPAARAGQVFTFSLAEALQRGPVVVYFYPAAFTSGCTVEA HDFAEAMNDFEALGATVIGVSHDAIDTLSKFSVSECRGKFPVAADVDQAVMKNYDSVLIRNPLLAERTSYVIAPDGTILA VYSNSDPSEHVGKMLAALKAWKAKSPVP >Mature_188_residues MKRSMPRFCLSLSLSLVVALIAASPAFASLKIGTRAPDFTVPAARAGQVFTFSLAEALQRGPVVVYFYPAAFTSGCTVEA HDFAEAMNDFEALGATVIGVSHDAIDTLSKFSVSECRGKFPVAADVDQAVMKNYDSVLIRNPLLAERTSYVIAPDGTILA VYSNSDPSEHVGKMLAALKAWKAKSPVP
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=155, Percent_Identity=32.9032258064516, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 20018; Mature: 20018
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSMPRFCLSLSLSLVVALIAASPAFASLKIGTRAPDFTVPAARAGQVFTFSLAEALQR CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHH GPVVVYFYPAAFTSGCTVEAHDFAEAMNDFEALGATVIGVSHDAIDTLSKFSVSECRGKF CCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCC PVAADVDQAVMKNYDSVLIRNPLLAERTSYVIAPDGTILAVYSNSDPSEHVGKMLAALKA CCCCCHHHHHHHCCCCEECCCCCHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHH WKAKSPVP HCCCCCCC >Mature Secondary Structure MKRSMPRFCLSLSLSLVVALIAASPAFASLKIGTRAPDFTVPAARAGQVFTFSLAEALQR CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHH GPVVVYFYPAAFTSGCTVEAHDFAEAMNDFEALGATVIGVSHDAIDTLSKFSVSECRGKF CCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCC PVAADVDQAVMKNYDSVLIRNPLLAERTSYVIAPDGTILAVYSNSDPSEHVGKMLAALKA CCCCCHHHHHHHCCCCEECCCCCHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHH WKAKSPVP HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]