Definition Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome.
Accession NC_010581
Length 4,170,153

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The map label for this gene is ygaY [H]

Identifier: 182677957

GI number: 182677957

Start: 1109457

End: 1110644

Strand: Direct

Name: ygaY [H]

Synonym: Bind_0970

Alternate gene names: 182677957

Gene position: 1109457-1110644 (Clockwise)

Preceding gene: 182677956

Following gene: 182677958

Centisome position: 26.6

GC content: 59.68

Gene sequence:

>1188_bases
ATGCAAATCACTCAACCCGCAAGTGCCGCGACGACATCGGTCGGCAAGGGGCTTCTCTTCGCAATGGCTGCTTCTTGCGG
CATCGCTGTCGCCAACATCTATTACAATCAGCCGATGCTCGGCGTGATCGAAGACTCTTTTGATCATGCAGGCGCAGCCG
GGCTCATCCCGACTGCGACGCAACTCGGCTATGCGGCTGGCTTGTTCCTGCTCGTGCCACTTGGGGATCTGGTCGAGCGG
CGTAGGCTCATTGTCATGCAATTCGCTTTGCTCGGCATCGTCCTTGCCCTGGCTGGTCTCGCCCCCTCGGCTTGGACGCT
GGTCATCGCGTCTTTGTGTATCGGCTTTGCCGCAACGGTGGCGCAGCAGATCATCCCGTTCGCGGCATCCCTCGCGCCCG
CCAGTGAACGCGGCGCCGTGATCGGAACGGTGATGGGAGGTCTGCTGTGCGGAATCCTTCTCAGCCGGACGCTTGCCGGC
TATGTCGCGACATATTTTGGCTGGCGTGAAATGTTCTGGATTGGTGTCCCGCTTGCCTTAATCGGCGGTGTGTTGATGCG
TGTTGTATTGCCTTTGAGCCAGATCTCCTCGGATATCCGCTATCCGGCTCTCATCCGATCATTGGCGGGCCTTTGGCAGG
ATGAGCCGATCCTGCGCCAGGTGACGATCGTGCAGGCGGCTCTGTTTGCATCGTTCACCGCATTTTGGACGATCCTGGCG
TTGCGCCTGCAAGGCGCGGCATTTCATCTTGGCGCGGATGTAGCGGGTCTCTTTGGTTTCGTTGGCGCGGTTGGCATCCT
TGCCGCTCCGATGGCTGGGCATCTTGCCGATCGGCGTGGGCCTCGCCCTGTCGTCTTGCTTGGACTTGGTTCAGTCCTGC
TGGCTTGGATCCTTTTCGGCGTTTGGACGAGCTTGGTGGGCCTCGTGGTGGGTGTCGTTGTCTTGGATTTTGGTATGCAG
AGCGCATTGGTTTCTCACCAACACATGGTTTTTGCCTTGCGTCCTGAGGCGCGCAGCCGTCTGAACACAATCTTCATGAG
CGGGATGTTCGTCGGTGGGGCGATTGGATCCGCCGGCGCGACCTTCGCCTGGAATATCGCCGATTGGCCGGGTGTATGCG
TTTATGGCACTGGGCTCGCCTTGTTCGCGCTTGCTGTTCGATTGCTTGGCGGCCAGCCCGCTCGTTGA

Upstream 100 bases:

>100_bases
CTAGCCATACGTTAACGTCGTGCCGGCACACCTTTCTGGCATACATCTGAATTTTCCTGGCTTTGGCCATATCGTTCGCG
TTGGGGAAGAGCGTATTCAC

Downstream 100 bases:

>100_bases
TGTCTCTTCGCTTCTTTCGTGTCGGGCGTACGGTACTGACGACTTTCCGTGCGGATTGAACATGATGAAAAATCGCTCGG
CAAGAGAATCTGTTTCCTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MQITQPASAATTSVGKGLLFAMAASCGIAVANIYYNQPMLGVIEDSFDHAGAAGLIPTATQLGYAAGLFLLVPLGDLVER
RRLIVMQFALLGIVLALAGLAPSAWTLVIASLCIGFAATVAQQIIPFAASLAPASERGAVIGTVMGGLLCGILLSRTLAG
YVATYFGWREMFWIGVPLALIGGVLMRVVLPLSQISSDIRYPALIRSLAGLWQDEPILRQVTIVQAALFASFTAFWTILA
LRLQGAAFHLGADVAGLFGFVGAVGILAAPMAGHLADRRGPRPVVLLGLGSVLLAWILFGVWTSLVGLVVGVVVLDFGMQ
SALVSHQHMVFALRPEARSRLNTIFMSGMFVGGAIGSAGATFAWNIADWPGVCVYGTGLALFALAVRLLGGQPAR

Sequences:

>Translated_395_residues
MQITQPASAATTSVGKGLLFAMAASCGIAVANIYYNQPMLGVIEDSFDHAGAAGLIPTATQLGYAAGLFLLVPLGDLVER
RRLIVMQFALLGIVLALAGLAPSAWTLVIASLCIGFAATVAQQIIPFAASLAPASERGAVIGTVMGGLLCGILLSRTLAG
YVATYFGWREMFWIGVPLALIGGVLMRVVLPLSQISSDIRYPALIRSLAGLWQDEPILRQVTIVQAALFASFTAFWTILA
LRLQGAAFHLGADVAGLFGFVGAVGILAAPMAGHLADRRGPRPVVLLGLGSVLLAWILFGVWTSLVGLVVGVVVLDFGMQ
SALVSHQHMVFALRPEARSRLNTIFMSGMFVGGAIGSAGATFAWNIADWPGVCVYGTGLALFALAVRLLGGQPAR
>Mature_395_residues
MQITQPASAATTSVGKGLLFAMAASCGIAVANIYYNQPMLGVIEDSFDHAGAAGLIPTATQLGYAAGLFLLVPLGDLVER
RRLIVMQFALLGIVLALAGLAPSAWTLVIASLCIGFAATVAQQIIPFAASLAPASERGAVIGTVMGGLLCGILLSRTLAG
YVATYFGWREMFWIGVPLALIGGVLMRVVLPLSQISSDIRYPALIRSLAGLWQDEPILRQVTIVQAALFASFTAFWTILA
LRLQGAAFHLGADVAGLFGFVGAVGILAAPMAGHLADRRGPRPVVLLGLGSVLLAWILFGVWTSLVGLVVGVVVLDFGMQ
SALVSHQHMVFALRPEARSRLNTIFMSGMFVGGAIGSAGATFAWNIADWPGVCVYGTGLALFALAVRLLGGQPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41203; Mature: 41203

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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EEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]