| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677891
Identifier: 182677891
GI number: 182677891
Start: 1025517
End: 1026830
Strand: Direct
Name: 182677891
Synonym: Bind_0899
Alternate gene names: NA
Gene position: 1025517-1026830 (Clockwise)
Preceding gene: 182677890
Following gene: 182677896
Centisome position: 24.59
GC content: 57.23
Gene sequence:
>1314_bases ATGTTCGGATCGCGATGGTCCTGGCTGTTGGCGGGGTCGGTCGCCATTGGCTTGCTGCTGGTCGCGTCGATTGTGGCCGC CGTCTATTTCCTGAAACCGCATGCGACCTTGTACGTCACGACCGGACCCGCCGGGAGTGCCGCGGACGCTTTCATGCAGG CTTTCGTCAAAGTGACGACAAGCGAGCATCCGCGGATTCAGTTCACGCTCGTCCCGGTTCCGGATCTGGCGGCCAGTTCC AAGGCGATCGAGGATCATCAAGTCAACCTTGCCATTGTCCGCAGTGATGTATCCCCGCCCGCGAATGGAATGACCATCGC GATTCTGCGACGCGCCGCCGTCGCCTTCGTCCTGCCGCCAAAATCCCCCATCGACACGATCACAAAGCTCTACGGCAAGA CGGTCGGTATCCCGCAAGGGTTCATTCAGGAGAATAATGCGCAAGCTCTCGATACAATATTAAGTTACTATAATATTTCG CCTACAGCCGTGAAACGGGTTTTCCTCGCACGGGAGGAGATCGGCGAGGCCGTTCAACAAAAGCGTGTCAATGCGGTTCT GGCCATTGGCCCTGTTGGTCCGGGGGAAGTGGTTGATGCCGTCTCCGCGATCGCCAGGGCAACCAAGGGCACGCCGGGCA TTCTTGCCATTGACGAGGCGGAAGCCATCGCCAAACGGTTTCCCGGCTTCGAATCGCTTGATGTTCCAGCCGGCGCTTTC AGAGCCAAACCAGCAACGCCGAATGATCAGGTGACGACGCTCGCTGTCACTTATCGGTTTGTCGTTCCAGATACGATGCT CAATGTCGTGGCCGGGGCCCTTGCCCGATCGATCTTCGCGACAAAGGCCAAACTCATGGCTCTAAGCCCTCTCGCCAATG AAATCGAAGCGCCCGATCCCGATAGTAAAAGCCCGATCTTGCCTATTCATCCAGGTGTCACCGCTTATCTGAGCAGCGGA GAGCAAAGCTTTTTCGAGGAGTTTCAGAGCTATATTTATATTGGGACCATGATTGCGAGCGTGCTCGGCTCTGCGTTTGC CATTATCAGCGGGCGGCTGAGCAGTCAAAAATCCGACGCTGCCATGCAACAAATCACCCGGCTGATCGAAATCGCCGATC AAGCCGCGAGTGCCGAGCTGGCAGGGCTTGATGCCTTGGAGAAGGAATTCAACCAAATCGTGGCATCGCTTCTGACCCAG CATGCCGTGGATACAGGCGGGTCGAGCGCTTTTTCCGTTGCCATCGATCATACACGCCATGCCATCGAACACCGCCGCCA GATCTTGGAACCAAGGTCGCCGCAGAGCGCGTGA
Upstream 100 bases:
>100_bases CGCGGCGCGGCAGATCTCAATGTCCTTGCTTTTGCTGGGAACGGCGGGCAAGGTGCTGTCGTGATGACCTGACGTGGTCT TGCTGAGGGAGGCGGGCCAG
Downstream 100 bases:
>100_bases TCGCAACGGACCATCAACTCGGCCAGGCATGCAGCGCCGTCGCCACGACCTCCTGTAAATCCTTGCGCGTGACGCCAGCC ATCGCTTGCACGCAAAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TAXI Family TRAP Transporter Solute Receptor; Transmembrane Component; Transport System Periplasmic Component; Signal Peptide; Trap Transporter Solute Receptor Taxi Family; TRAP-Type Transport System
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MFGSRWSWLLAGSVAIGLLLVASIVAAVYFLKPHATLYVTTGPAGSAADAFMQAFVKVTTSEHPRIQFTLVPVPDLAASS KAIEDHQVNLAIVRSDVSPPANGMTIAILRRAAVAFVLPPKSPIDTITKLYGKTVGIPQGFIQENNAQALDTILSYYNIS PTAVKRVFLAREEIGEAVQQKRVNAVLAIGPVGPGEVVDAVSAIARATKGTPGILAIDEAEAIAKRFPGFESLDVPAGAF RAKPATPNDQVTTLAVTYRFVVPDTMLNVVAGALARSIFATKAKLMALSPLANEIEAPDPDSKSPILPIHPGVTAYLSSG EQSFFEEFQSYIYIGTMIASVLGSAFAIISGRLSSQKSDAAMQQITRLIEIADQAASAELAGLDALEKEFNQIVASLLTQ HAVDTGGSSAFSVAIDHTRHAIEHRRQILEPRSPQSA
Sequences:
>Translated_437_residues MFGSRWSWLLAGSVAIGLLLVASIVAAVYFLKPHATLYVTTGPAGSAADAFMQAFVKVTTSEHPRIQFTLVPVPDLAASS KAIEDHQVNLAIVRSDVSPPANGMTIAILRRAAVAFVLPPKSPIDTITKLYGKTVGIPQGFIQENNAQALDTILSYYNIS PTAVKRVFLAREEIGEAVQQKRVNAVLAIGPVGPGEVVDAVSAIARATKGTPGILAIDEAEAIAKRFPGFESLDVPAGAF RAKPATPNDQVTTLAVTYRFVVPDTMLNVVAGALARSIFATKAKLMALSPLANEIEAPDPDSKSPILPIHPGVTAYLSSG EQSFFEEFQSYIYIGTMIASVLGSAFAIISGRLSSQKSDAAMQQITRLIEIADQAASAELAGLDALEKEFNQIVASLLTQ HAVDTGGSSAFSVAIDHTRHAIEHRRQILEPRSPQSA >Mature_437_residues MFGSRWSWLLAGSVAIGLLLVASIVAAVYFLKPHATLYVTTGPAGSAADAFMQAFVKVTTSEHPRIQFTLVPVPDLAASS KAIEDHQVNLAIVRSDVSPPANGMTIAILRRAAVAFVLPPKSPIDTITKLYGKTVGIPQGFIQENNAQALDTILSYYNIS PTAVKRVFLAREEIGEAVQQKRVNAVLAIGPVGPGEVVDAVSAIARATKGTPGILAIDEAEAIAKRFPGFESLDVPAGAF RAKPATPNDQVTTLAVTYRFVVPDTMLNVVAGALARSIFATKAKLMALSPLANEIEAPDPDSKSPILPIHPGVTAYLSSG EQSFFEEFQSYIYIGTMIASVLGSAFAIISGRLSSQKSDAAMQQITRLIEIADQAASAELAGLDALEKEFNQIVASLLTQ HAVDTGGSSAFSVAIDHTRHAIEHRRQILEPRSPQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46309; Mature: 46309
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGSRWSWLLAGSVAIGLLLVASIVAAVYFLKPHATLYVTTGPAGSAADAFMQAFVKVTT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC SEHPRIQFTLVPVPDLAASSKAIEDHQVNLAIVRSDVSPPANGMTIAILRRAAVAFVLPP CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEEEEECC KSPIDTITKLYGKTVGIPQGFIQENNAQALDTILSYYNISPTAVKRVFLAREEIGEAVQQ CCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KRVNAVLAIGPVGPGEVVDAVSAIARATKGTPGILAIDEAEAIAKRFPGFESLDVPAGAF HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCC RAKPATPNDQVTTLAVTYRFVVPDTMLNVVAGALARSIFATKAKLMALSPLANEIEAPDP CCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC DSKSPILPIHPGVTAYLSSGEQSFFEEFQSYIYIGTMIASVLGSAFAIISGRLSSQKSDA CCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AMQQITRLIEIADQAASAELAGLDALEKEFNQIVASLLTQHAVDTGGSSAFSVAIDHTRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH AIEHRRQILEPRSPQSA HHHHHHHHCCCCCCCCC >Mature Secondary Structure MFGSRWSWLLAGSVAIGLLLVASIVAAVYFLKPHATLYVTTGPAGSAADAFMQAFVKVTT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHC SEHPRIQFTLVPVPDLAASSKAIEDHQVNLAIVRSDVSPPANGMTIAILRRAAVAFVLPP CCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEEEEECC KSPIDTITKLYGKTVGIPQGFIQENNAQALDTILSYYNISPTAVKRVFLAREEIGEAVQQ CCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KRVNAVLAIGPVGPGEVVDAVSAIARATKGTPGILAIDEAEAIAKRFPGFESLDVPAGAF HHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCC RAKPATPNDQVTTLAVTYRFVVPDTMLNVVAGALARSIFATKAKLMALSPLANEIEAPDP CCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCC DSKSPILPIHPGVTAYLSSGEQSFFEEFQSYIYIGTMIASVLGSAFAIISGRLSSQKSDA CCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AMQQITRLIEIADQAASAELAGLDALEKEFNQIVASLLTQHAVDTGGSSAFSVAIDHTRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHH AIEHRRQILEPRSPQSA HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA