| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677698
Identifier: 182677698
GI number: 182677698
Start: 790713
End: 791039
Strand: Direct
Name: 182677698
Synonym: Bind_0705
Alternate gene names: NA
Gene position: 790713-791039 (Clockwise)
Preceding gene: 182677697
Following gene: 182677699
Centisome position: 18.96
GC content: 60.24
Gene sequence:
>764_bases ATGACGCGCCGCCGCTACGAACTCACCGACCATGAATGGTGGATCCTGTCGCCTCTATTGCCCAACAAACCGCGTGGCGT TGCTCGCGTCGATGATCGGCGGGTGCTGAATGGCATTCTTTGGCGGTTCCGAACGGGCTCGCCTTGGGCAGAGATTCCAG AGCGCTACGGCCCACCGACCACTTGCTACAACCGCTTTGTGCGGTGGCGGAAAGCCGGGGTCTGGGATCGGCTTCTCGAC GCGGTTTCAGAGGCTTACGACGGTGACATCGTCATGATTGACTCGACCTGTGTTCGCGTTCACCAGCACGCGGCTACGGG AAAAAAGGGGATGGAGACGATGGCGGCATGGGACGTTCCCGCGGCGGGCTCACCAGCAAAATCCATGCTCTCGTCGATGC CGAAGGGCGCCCCGTCACCCTCCGCTTAACCGGCGGTCAGGTCGCGGACTGCACCGAAGCCGATGCGTTGACCGATGGTC TCGGCGAAGGAGACATCCTGCTGGCCGACAAGGGTTATGATAGCAACGCTATCCGAGCCAAGGCGGCGGAGCGGAAAGCC TGGGCCAACATCCCACCAAAAGACAATCGCAAGGGGAGCTTCTCCTTCTCGCGTTGGGTCTATCGGCAACGCAACCTCGT GGAACGGTTCTTTAACCGGATCAAGCAGTTCCGCGGCATCGCAACACGCTACGACAAAGACCCCGCCAACTTCCTCGCCG CTATCAAACTCGTCGCGATAAGAATTTGGTGCCAAAGTTTATGA
Upstream 100 bases:
>100_bases GTTGGCAAGAGCCAGGGGCGAGGGCCTAGGTCGTAAACTCATAAATTCGCTTTGCGATTGTCAGTTTGCATGATTCAAGG CTTCCAAAAGAGGAAGCCAG
Downstream 100 bases:
>100_bases GTCGACGCCCTAGTGCACCGGGAACAAGCAAATAGCCTTCAAGAGTCCTCTTTTCGCCTCTGTAGCGGCCATGCTAATCA TGCGGCATGACCGTGCAAAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>254_residues MTRRRYELTDHEWWILSPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEIPERYGPPTTCYNRFVRWRKAGVWDRLLD AVSEAYDGDIVMIDSTCVRVHQHAATGKKGDGDDGGMGRSRGGLTSKIHALVDAEGRPVTLRLTGGQVADCTEADALTDG LGEGDILLADKGYDSNAIRAKAAERKAWANIPPKDNRKGSFSFSRWVYRQRNLVERFFNRIKQFRGIATRYDKDPANFLA AIKLVAIRIWCQSL
Sequences:
>Translated_109_residues MTRRRYELTDHEWWILSPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEIPERYGPPTTCYNRFVRWRKAGVWDRLLD AVSEAYDGDIVMIDSTCVRVHQHAATGKK >Mature_108_residues TRRRYELTDHEWWILSPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEIPERYGPPTTCYNRFVRWRKAGVWDRLLDA VSEAYDGDIVMIDSTCVRVHQHAATGKK
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12851; Mature: 12720
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRYELTDHEWWILSPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEIPERYGPPT CCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH TCYNRFVRWRKAGVWDRLLDAVSEAYDGDIVMIDSTCVRVHQHAATGKK HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCC >Mature Secondary Structure TRRRYELTDHEWWILSPLLPNKPRGVARVDDRRVLNGILWRFRTGSPWAEIPERYGPPT CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH TCYNRFVRWRKAGVWDRLLDAVSEAYDGDIVMIDSTCVRVHQHAATGKK HHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]