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The map label for this gene is yraR [H]

Identifier: 182677033

GI number: 182677033

Start: 33829

End: 34503

Strand: Direct

Name: yraR [H]

Synonym: Bind_0031

Alternate gene names: 182677033

Gene position: 33829-34503 (Clockwise)

Preceding gene: 182677032

Following gene: 182677035

Centisome position: 0.81

GC content: 66.22

Gene sequence:

>675_bases
ATGATGCAACGCATCCTTCTCGCCGGCAGCACCGGTCTGGTTGGCGCTCTCGTCGGTGCCCGGCTCGCGACACGTTCCGA
CATCGATCTCGTCGCTCTCGTCCGGCGGGGATCGTCCGCCCCCGGCAGCGGGATTGATTTCGAGCGGCTGTGCGACGCGC
CCGAGGCCATGCTGAAACCCATCGTGTCCGACGGTATCGATGTCGCTATCTCCTGCCTCGGCACAACCATCCGCACGGCT
GGATCGCAGTCGGCCATGTTCCGTGTCGACCATGATTATGTGCTCGCCGCCGCCAGGGGCGCCCGCGCATTGGGGGCGCG
CCAGTTCATCCTCGTCACCGCCGCAGGGGCCGGTGGCCCCGGCTTTTATTTGCAGACCAAGGGCGCGATTGAGCGCGCCG
TCATTGATCTGGGCTTTGATCGGGTGGACCTGATACGGCCCGGATTCCTGCTGGGCAGCCGCAGCGAACGGAGGGTGTGG
GAGGCGATCGGCCAGCGGCTCTTCGCGGCGCTCACCCCCGTCTTACTCGGCCCGCTCTCACGCTACGGCGCCATTCCCGC
GGAGACGGTGGCGGAAGCGATCGTCGGGCTCGTCGGACGCGAAGAAACTGGACGTTACATTCACCACAATGCCGATCTGC
GTCGCATCGGCCGTCGCGAACATGCCGTGCCATAG

Upstream 100 bases:

>100_bases
GCATCTGCCCAAAGGTGCGGCCGTCATCGGCCTTTACTAACCCATTATGTCCAGGCGCGCGGATCGGCGTGTCGCGTCCT
TCCAGCGGAGTTTTCTGTCC

Downstream 100 bases:

>100_bases
AGGGAGAACGGCGGCAATCGGTGGGTTTCGGCGGCTAAAATGGAGAAAGAGGCGTCCATATCGGACAATTGGCGGTGTTT
GACGCCGCTTCACCTGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MMQRILLAGSTGLVGALVGARLATRSDIDLVALVRRGSSAPGSGIDFERLCDAPEAMLKPIVSDGIDVAISCLGTTIRTA
GSQSAMFRVDHDYVLAAARGARALGARQFILVTAAGAGGPGFYLQTKGAIERAVIDLGFDRVDLIRPGFLLGSRSERRVW
EAIGQRLFAALTPVLLGPLSRYGAIPAETVAEAIVGLVGREETGRYIHHNADLRRIGRREHAVP

Sequences:

>Translated_224_residues
MMQRILLAGSTGLVGALVGARLATRSDIDLVALVRRGSSAPGSGIDFERLCDAPEAMLKPIVSDGIDVAISCLGTTIRTA
GSQSAMFRVDHDYVLAAARGARALGARQFILVTAAGAGGPGFYLQTKGAIERAVIDLGFDRVDLIRPGFLLGSRSERRVW
EAIGQRLFAALTPVLLGPLSRYGAIPAETVAEAIVGLVGREETGRYIHHNADLRRIGRREHAVP
>Mature_224_residues
MMQRILLAGSTGLVGALVGARLATRSDIDLVALVRRGSSAPGSGIDFERLCDAPEAMLKPIVSDGIDVAISCLGTTIRTA
GSQSAMFRVDHDYVLAAARGARALGARQFILVTAAGAGGPGFYLQTKGAIERAVIDLGFDRVDLIRPGFLLGSRSERRVW
EAIGQRLFAALTPVLLGPLSRYGAIPAETVAEAIVGLVGREETGRYIHHNADLRRIGRREHAVP

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=158, Percent_Identity=37.9746835443038, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI148728168, Length=158, Percent_Identity=37.9746835443038, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI148728164, Length=158, Percent_Identity=37.9746835443038, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI148728166, Length=158, Percent_Identity=37.9746835443038, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI87082218, Length=217, Percent_Identity=32.258064516129, Blast_Score=95, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71983631, Length=230, Percent_Identity=30.8695652173913, Blast_Score=106, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23754; Mature: 23754

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQRILLAGSTGLVGALVGARLATRSDIDLVALVRRGSSAPGSGIDFERLCDAPEAMLKP
CCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHH
IVSDGIDVAISCLGTTIRTAGSQSAMFRVDHDYVLAAARGARALGARQFILVTAAGAGGP
HHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHCCHHHHCCCEEEEEEECCCCCC
GFYLQTKGAIERAVIDLGFDRVDLIRPGFLLGSRSERRVWEAIGQRLFAALTPVLLGPLS
CEEEEECHHHHHHHHHCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYGAIPAETVAEAIVGLVGREETGRYIHHNADLRRIGRREHAVP
HHCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMQRILLAGSTGLVGALVGARLATRSDIDLVALVRRGSSAPGSGIDFERLCDAPEAMLKP
CCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHH
IVSDGIDVAISCLGTTIRTAGSQSAMFRVDHDYVLAAARGARALGARQFILVTAAGAGGP
HHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHCCHHHHCCCEEEEEEECCCCCC
GFYLQTKGAIERAVIDLGFDRVDLIRPGFLLGSRSERRVWEAIGQRLFAALTPVLLGPLS
CEEEEECHHHHHHHHHCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYGAIPAETVAEAIVGLVGREETGRYIHHNADLRRIGRREHAVP
HHCCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]