| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is 182677010
Identifier: 182677010
GI number: 182677010
Start: 6552
End: 7292
Strand: Direct
Name: 182677010
Synonym: Bind_0008
Alternate gene names: NA
Gene position: 6552-7292 (Clockwise)
Preceding gene: 182677009
Following gene: 182677011
Centisome position: 0.16
GC content: 61.54
Gene sequence:
>741_bases GTGCTGGTTCTGATCACGAGGCCTTTCGAGGAAGCCCTGCGCAGCGCCGCCAAGCTCGAGGGAGCCGGCTATTCCGCGCT CTTGTCGCCGGTCCTCACCATGCGCGCCACGGGAGCCTCCTGGCCCGAGGGCGTCGTTGATGGCGTGATCGCGACCAGCG CCCAAGCTTTCGATCTTTTGGTTCTGCGGCCTGAATGGCCCTTGCCGGAAGCGCTTCGTCTGATGCCGCTATGGCTCGTC GGAGATCGAACGGGCGATGCGGCGCACCGCAAGGGATTTGACGGTCCGGTACGATTAGCTCCCCATGCGAAACTCCTAGC GCAGGAAATTACCGCCGCCCTTTCGCCGCCAGCGCGCCTCATCTATCTCGCAGGCCAGGATCGCAAGCCCGATCTCGAAA AGAAATTGAGCAAGGCGGGTCTGACCGTTGAAGCCCAGGAAATCTACGCCGCGGAGGCGGTTGACCAATTGAGCGATATC GCCCTTGAGTCCTTGAGGCGCAATGATGTTGGCGCGGCCATGCATTATTCACGGCGCAGCGCCGAGATTTTTCTTGGCCT GATGCGGAAGGCCGAACTCGATCCGGCGACATTCGTGCATATCTGCATGTCGGAGGATGTGGCTGTGCCGCTGAAAGATG CCGGTTGCGCGACGCAGGTAGCCGCAACCTCGAATGAAGAAGGCATGCTCGACGCGCTTAAGGCCATAGCCGCCGCGCGG GAGTCTTCTCGGGAGTCTTGA
Upstream 100 bases:
>100_bases GCGAAACCGCAGCGCGCGCTATTCTGGCGCGGTTGCCGGAAGGATTCTTCCAAGAGAGCGCCCAAGAAAATGCCCAAAAA AACGCTAAGGAGTAGAGAGC
Downstream 100 bases:
>100_bases TCCAATGCACGGCCATGGTCTCGATGATCGATGTCGCGGCGTTGCAATCGTCATCGGTGCACATGCCGATGCATCGTGAC TCCGCGCTCGCGGTCGAGGC
Product: uroporphyrinogen III synthase HEM4
Products: uroporphyrinogen III; H2O
Alternate protein names: Uroporphyrinogen III Synthase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASWPEGVVDGVIATSAQAFDLLVLRPEWPLPEALRLMPLWLV GDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPPARLIYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDI ALESLRRNDVGAAMHYSRRSAEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCATQVAATSNEEGMLDALKAIAAAR ESSRES
Sequences:
>Translated_246_residues MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASWPEGVVDGVIATSAQAFDLLVLRPEWPLPEALRLMPLWLV GDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPPARLIYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDI ALESLRRNDVGAAMHYSRRSAEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCATQVAATSNEEGMLDALKAIAAAR ESSRES >Mature_246_residues MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASWPEGVVDGVIATSAQAFDLLVLRPEWPLPEALRLMPLWLV GDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPPARLIYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDI ALESLRRNDVGAAMHYSRRSAEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCATQVAATSNEEGMLDALKAIAAAR ESSRES
Specific function: Unknown
COG id: COG1587
COG function: function code H; Uroporphyrinogen-III synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.75
Molecular weight: Translated: 26411; Mature: 26411
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASWPEGVVDGVIATSAQAFDLL CEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE VLRPEWPLPEALRLMPLWLVGDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPPARL EECCCCCCHHHHHHCCCEEEECCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCEEE IYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDIALESLRRNDVGAAMHYSRRS EEEECCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCATQVAATSNEEGMLDALKAIAAAR HHHHHHHHHHCCCCHHHEEEEEECCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHH ESSRES HHCCCC >Mature Secondary Structure MLVLITRPFEEALRSAAKLEGAGYSALLSPVLTMRATGASWPEGVVDGVIATSAQAFDLL CEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEE VLRPEWPLPEALRLMPLWLVGDRTGDAAHRKGFDGPVRLAPHAKLLAQEITAALSPPARL EECCCCCCHHHHHHCCCEEEECCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCEEE IYLAGQDRKPDLEKKLSKAGLTVEAQEIYAAEAVDQLSDIALESLRRNDVGAAMHYSRRS EEEECCCCCCCHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AEIFLGLMRKAELDPATFVHICMSEDVAVPLKDAGCATQVAATSNEEGMLDALKAIAAAR HHHHHHHHHHCCCCHHHEEEEEECCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHH ESSRES HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydroxymethylbilane
Specific reaction: hydroxymethylbilane = uroporphyrinogen III + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA