Click here to switch to the map view.

The map label for this gene is hrdB

Identifier: 182435494

GI number:

Start: 2005872

End: 2007416

Strand: Reverse

Name: hrdB

Synonym: SGR_1701

Alternate gene names: NA

Gene position: NA

Preceding gene: 182435495

Following gene: 182435493

Centisome position: NA

GC content: NA

Gene sequence:

>1545_bases
GTGTCGGCCAGCACATCCCGTACGCTCCCGCCGGAGATCGCCGAGTCCGAGTCTGTGATGGCGCTCATCGAGCGGGGAAA
GGCTGATGGGCAGATCGCCGGCGATGACGTGCGTCGGGCCTTCGAGGCTGACCAGATTCCGCCAACCCAGTGGAAGAACG
TTCTGCGCAGCCTCAACCAGATCCTCGAGGAAGAGGGTGTGACGCTGATGGTCAGTGCCGCGGAGTCGCCGAAGCGCGCC
CGCAAGAGCGTCGCAGCGAAGAGCCCGGTCAAGCGCACCGCCACCAAGACCGTCGCGGCGAAGACGACCGTGACCAGGAC
CGTCGCGGCCACCGCCGCCCCGGCGGTCGAGAGCGCGGACGCGGCCGACGACGCCGTCGCCGCCGCCCCCGCCAAGAAGA
CGGCAGCCAAGAAGGCCACGGCCAAGAAGGCAGCCGCCAAGAAGACGACGGCCAAGAAGACCGCCGCCAAGAAGTCCGGC
AAGCAGGACGACGAGATCCTCGACGGCGACGAGGCGGCCGAGGAAGTCAAGGCCGGCAAGGGTGAGGAAGAGGAGGGCGA
GGGCGAGAACAAGGGCTTCGTCCTCTCCGACGACGACGAGGACGACGCGCCCGCGCAGCAGGTCGCCGTCGCCGGCGCCA
CCGCCGACCCGGTCAAGGACTACCTGAAGCAGATCGGCAAGGTTCCCCTCCTCAACGCCGAGCAGGAGGTCGAGCTCGCC
AAGCGCATCGAGGCCGGTCTCTTCGCCGAGGACAAGCTGGCGAACGCCGACAAGCTCGCGCCGAAGCTCAAGCGCGAGCT
GGAGATCATCGCCGAGGACGGCCGCCGGGCCAAGAACCACCTCCTGGAGGCCAACCTCCGTCTGGTGGTCTCCCTGGCCA
AGCGCTACACGGGTCGCGGCATGCTCTTCCTGGACCTGATCCAGGAGGGCAACCTCGGTCTGATCCGCGCGGTCGAGAAG
TTCGACTACACCAAGGGCTACAAGTTCTCCACGTACGCCACCTGGTGGATCCGTCAGGCGATCACCCGCGCGATGGCCGA
CCAGGCCCGCACCATCCGTATCCCGGTGCACATGGTCGAGGTCATCAACAAGCTCGCGCGCGTGCAGCGCCAGATGCTCC
AGGACCTGGGCCGCGAGCCCACCCCGGAGGAGCTGGCCAAGGAACTCGACATGACCCCCGAGAAGGTCATCGAGGTCCAG
AAGTACGGTCGCGAGCCGATCTCGCTGCACACCCCGCTCGGTGAGGACGGCGACAGCGAGTTCGGTGACCTGATCGAGGA
CTCCGAGGCCGTCGTCCCGGCGGACGCGGTCAGCTTCACGCTCCTCCAGGAGCAGCTCCACTCCGTGCTCGACACGCTCT
CCGAGCGTGAGGCGGGCGTGGTCTCGATGCGCTTCGGTCTCACCGACGGCCAGCCGAAGACGCTCGACGAGATCGGCAAG
GTCTACGGCGTGACGCGTGAGCGCATCCGTCAGATCGAGTCGAAGACGATGTCGAAGCTCCGCCACCCGTCCCGCTCGCA
GGTGCTGCGCGACTACCTCGACTAG

Upstream 100 bases:

>100_bases
AAACCCGCGCCGTCGGCGACATCCCCAGTCGACGGTCGTCGGTTCCAGCCCTCTCCAGGGCGGGGCCGGAAGCCGTTTCC
ATCGTTCCGAGAGGTTGTTC

Downstream 100 bases:

>100_bases
ATCGAGGAGATCCACCGGCCGAGGGCCCGGAACCCCGAGGGGATCCGGGCCCTCCGGCGTGTCCTCGGGGGCGGACGGTG
ACCGGCTGGATCACGCTGGG

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>514_residues
MSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQILEEEGVTLMVSAAESPKRA
RKSVAAKSPVKRTATKTVAAKTTVTRTVAATAAPAVESADAADDAVAAAPAKKTAAKKATAKKAAAKKTTAKKTAAKKSG
KQDDEILDGDEAAEEVKAGKGEEEEGEGENKGFVLSDDDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELA
KRIEAGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEK
FDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQ
KYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGK
VYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA