| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17548151
Identifier: 17548151
GI number: 17548151
Start: 3704598
End: 3704858
Strand: Reverse
Name: 17548151
Synonym: RSc3434
Alternate gene names: NA
Gene position: 3704858-3704598 (Counterclockwise)
Preceding gene: 17548152
Following gene: 17548150
Centisome position: 99.69
GC content: 62.07
Gene sequence:
>261_bases ATGACCTCCAAACGCCACATCTACCTAACCGGCGCACTCGCCGCCCGCGACTTCCTGCGCCGCACGCAATCCGACCTGCA CACCCATCAGCAGTACCAGCCGGAGTCATTGCGCTGGGAGATGGTCTTTGCAACCGCATCGCAGCCGCCTGAGTTTCTGG CGGGCTTTGTCGATGCCATCGGGGCGTTCGTGCTGATGACGCTGGAGGGCTGCGACATCAATCCGCAGACGTGGGAAGTG CTGACCGCTGTCGATCGATAG
Upstream 100 bases:
>100_bases AGGCTGTCATGACTGCAAACCACAGCGGGCACCGCCCCGCGTCATACCCATCCCCACCGCACCAACACCCCCGCACTTCC CACCGCCCCGGAGGCCCCCA
Downstream 100 bases:
>100_bases CGCGGTAGGGCTCACGCCGCGCGCAACAGATGAGTGCATCCCCGGATGTATGCGGGGATGCCGGCCAGCGACAACCGCGT GTGCCACGGCATACCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTSKRHIYLTGALAARDFLRRTQSDLHTHQQYQPESLRWEMVFATASQPPEFLAGFVDAIGAFVLMTLEGCDINPQTWEV LTAVDR
Sequences:
>Translated_86_residues MTSKRHIYLTGALAARDFLRRTQSDLHTHQQYQPESLRWEMVFATASQPPEFLAGFVDAIGAFVLMTLEGCDINPQTWEV LTAVDR >Mature_85_residues TSKRHIYLTGALAARDFLRRTQSDLHTHQQYQPESLRWEMVFATASQPPEFLAGFVDAIGAFVLMTLEGCDINPQTWEVL TAVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9797; Mature: 9666
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKRHIYLTGALAARDFLRRTQSDLHTHQQYQPESLRWEMVFATASQPPEFLAGFVDAI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHH GAFVLMTLEGCDINPQTWEVLTAVDR HHHHHHHCCCCCCCCCHHHHHEECCC >Mature Secondary Structure TSKRHIYLTGALAARDFLRRTQSDLHTHQQYQPESLRWEMVFATASQPPEFLAGFVDAI CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHH GAFVLMTLEGCDINPQTWEVLTAVDR HHHHHHHCCCCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA