| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is phhA
Identifier: 17548072
GI number: 17548072
Start: 3615539
End: 3616480
Strand: Direct
Name: phhA
Synonym: RSc3355
Alternate gene names: 17548072
Gene position: 3615539-3616480 (Clockwise)
Preceding gene: 17548066
Following gene: 17548073
Centisome position: 97.29
GC content: 69.21
Gene sequence:
>942_bases ATGGCCATCGCCACCCCCACCAGCGCAGCCCCCACCCCGGCCCCGGCCGGCTTCACCGGCACCCTGACCGACAAGCTCCG CGAGCAGTTCGCCGAAGGCCTCGACGGCCAGACGCTGCGCCCGGACTTCACGATGGAACAGCCTGTCCACCGCTACACCG CCGCCGACCACGCCACCTGGCGCACGCTGTACGACCGCCAGGAAGCCCTGCTCCCGGGACGCGCCTGCGATGAATTCCTG CAAGGCCTGTCCACGCTGGGCATGAGCCGCGAAGGCGTGCCGTCGTTCGACCGGCTCAACGAAACGCTGATGCGCGCCAC CGGCTGGCAGATCGTGGCCGTGCCCGGCCTGGTGCCGGACGAAGTCTTCTTCGAGCACCTCGCCAACCGCCGCTTCCCGG CCAGCTGGTGGATGCGCCGTCCCGACCAGCTCGACTACCTGCAGGAGCCGGACGGCTTCCACGACATCTTTGGCCACGTG CCGCTGCTGATCAACCCGGTCTTCGCCGACTACATGCAGGCCTATGGCCAGGGCGGCCTGAAGGCGGCGCGCCTGGGTGC GCTCGACATGCTGGCGCGGCTGTACTGGTACACGGTGGAGTTCGGCCTGATCCGCACGCCGGCCGGCCTGCGCATCTACG GCGCGGGCATCGTGTCGAGCAAGAGCGAGTCGGTCTACGCGCTGGATTCGGCCAGCCCCAACCGCATCGGCTTCGACGTG CACCGCATCATGCGCACGCGCTACCGCATCGACACCTTCCAGAAGACCTACTTCGTGATCGACAGCTTCGAGCAGCTGTT CGACGCCACCCGCCCGGACTTCACGCCGCTGTACGAGGCACTCGGCACGCTGCCGACCTTCGGCGCCGGCGACGTGGTGG ACGGCGACGCCGTGCTCAACGCCGGCACCCGCGAGGGCTGGGCCGACACGGCGGATATCTGA
Upstream 100 bases:
>100_bases TCTGCAAACAACGCGCGAATGGCGCCGGTTTTGCGGTCAATCCGCGCGGCCCCGCCCCTACACTGGCGAATTCCGATCGC CCCCGACCAGGATATCCATC
Downstream 100 bases:
>100_bases GCGCTGGCTATACTGCGCGCATTCCCATCCGCCATCGACCCGAGACCATGATGCCGACTCTCAATGACGAACAACGCAAG GCCCTGTTTGCCGAACTGCC
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MAIATPTSAAPTPAPAGFTGTLTDKLREQFAEGLDGQTLRPDFTMEQPVHRYTAADHATWRTLYDRQEALLPGRACDEFL QGLSTLGMSREGVPSFDRLNETLMRATGWQIVAVPGLVPDEVFFEHLANRRFPASWWMRRPDQLDYLQEPDGFHDIFGHV PLLINPVFADYMQAYGQGGLKAARLGALDMLARLYWYTVEFGLIRTPAGLRIYGAGIVSSKSESVYALDSASPNRIGFDV HRIMRTRYRIDTFQKTYFVIDSFEQLFDATRPDFTPLYEALGTLPTFGAGDVVDGDAVLNAGTREGWADTADI
Sequences:
>Translated_313_residues MAIATPTSAAPTPAPAGFTGTLTDKLREQFAEGLDGQTLRPDFTMEQPVHRYTAADHATWRTLYDRQEALLPGRACDEFL QGLSTLGMSREGVPSFDRLNETLMRATGWQIVAVPGLVPDEVFFEHLANRRFPASWWMRRPDQLDYLQEPDGFHDIFGHV PLLINPVFADYMQAYGQGGLKAARLGALDMLARLYWYTVEFGLIRTPAGLRIYGAGIVSSKSESVYALDSASPNRIGFDV HRIMRTRYRIDTFQKTYFVIDSFEQLFDATRPDFTPLYEALGTLPTFGAGDVVDGDAVLNAGTREGWADTADI >Mature_312_residues AIATPTSAAPTPAPAGFTGTLTDKLREQFAEGLDGQTLRPDFTMEQPVHRYTAADHATWRTLYDRQEALLPGRACDEFLQ GLSTLGMSREGVPSFDRLNETLMRATGWQIVAVPGLVPDEVFFEHLANRRFPASWWMRRPDQLDYLQEPDGFHDIFGHVP LLINPVFADYMQAYGQGGLKAARLGALDMLARLYWYTVEFGLIRTPAGLRIYGAGIVSSKSESVYALDSASPNRIGFDVH RIMRTRYRIDTFQKTYFVIDSFEQLFDATRPDFTPLYEALGTLPTFGAGDVVDGDAVLNAGTREGWADTADI
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family
Homologues:
Organism=Homo sapiens, GI4759248, Length=265, Percent_Identity=33.5849056603774, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI88900505, Length=228, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI88900501, Length=228, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI88900503, Length=228, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI31795563, Length=231, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI4557819, Length=261, Percent_Identity=29.5019157088123, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17531391, Length=222, Percent_Identity=35.5855855855856, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI71980736, Length=234, Percent_Identity=30.3418803418803, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI115532103, Length=268, Percent_Identity=30.2238805970149, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI115533973, Length=268, Percent_Identity=30.2238805970149, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71980731, Length=167, Percent_Identity=28.1437125748503, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI62472054, Length=260, Percent_Identity=30.7692307692308, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24660393, Length=260, Percent_Identity=30.7692307692308, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24654994, Length=263, Percent_Identity=31.1787072243346, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI17136776, Length=228, Percent_Identity=29.3859649122807, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI17136774, Length=228, Percent_Identity=29.3859649122807, Blast_Score=114, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PH4H_RALSO (Q8XU39)
Other databases:
- EMBL: AL646052 - RefSeq: NP_521474.1 - ProteinModelPortal: Q8XU39 - SMR: Q8XU39 - GeneID: 1222219 - GenomeReviews: AL646052_GR - KEGG: rso:RSc3355 - NMPDR: fig|267608.1.peg.3353 - HOGENOM: HBG403840 - OMA: FLARLYW - ProtClustDB: PRK11913 - BioCyc: RSOL267608:RSC3355-MONOMER - BRENDA: 1.14.16.1 - InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 - Gene3D: G3DSA:1.10.800.10 - PANTHER: PTHR11473 - PRINTS: PR00372 - TIGRFAMs: TIGR01267
Pfam domain/function: PF00351 Biopterin_H; SSF56534 Aaa_hydroxylase
EC number: =1.14.16.1
Molecular weight: Translated: 34902; Mature: 34771
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00367 BH4_AAA_HYDROXYL_1; PS51410 BH4_AAA_HYDROXYL_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIATPTSAAPTPAPAGFTGTLTDKLREQFAEGLDGQTLRPDFTMEQPVHRYTAADHATW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHH RTLYDRQEALLPGRACDEFLQGLSTLGMSREGVPSFDRLNETLMRATGWQIVAVPGLVPD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCH EVFFEHLANRRFPASWWMRRPDQLDYLQEPDGFHDIFGHVPLLINPVFADYMQAYGQGGL HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC KAARLGALDMLARLYWYTVEFGLIRTPAGLRIYGAGIVSSKSESVYALDSASPNRIGFDV HHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCEECCCCCCEEEECCCCCCCCHHHH HRIMRTRYRIDTFQKTYFVIDSFEQLFDATRPDFTPLYEALGTLPTFGAGDVVDGDAVLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCC AGTREGWADTADI CCCCCCCCCCCCC >Mature Secondary Structure AIATPTSAAPTPAPAGFTGTLTDKLREQFAEGLDGQTLRPDFTMEQPVHRYTAADHATW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHH RTLYDRQEALLPGRACDEFLQGLSTLGMSREGVPSFDRLNETLMRATGWQIVAVPGLVPD HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCH EVFFEHLANRRFPASWWMRRPDQLDYLQEPDGFHDIFGHVPLLINPVFADYMQAYGQGGL HHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC KAARLGALDMLARLYWYTVEFGLIRTPAGLRIYGAGIVSSKSESVYALDSASPNRIGFDV HHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEECCEECCCCCCEEEECCCCCCCCHHHH HRIMRTRYRIDTFQKTYFVIDSFEQLFDATRPDFTPLYEALGTLPTFGAGDVVDGDAVLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCC AGTREGWADTADI CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852