| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ypeB [C]
Identifier: 17548050
GI number: 17548050
Start: 3595801
End: 3596016
Strand: Direct
Name: ypeB [C]
Synonym: RSc3333
Alternate gene names: 17548050
Gene position: 3595801-3596016 (Clockwise)
Preceding gene: 17548049
Following gene: 17548052
Centisome position: 96.75
GC content: 67.13
Gene sequence:
>216_bases ATGACCCCCGAAGACCTCCAGCGCCTCGTCACCACCCCCATGCCCTTCGGCAAATACAAGGGCCGCCTGATCGCCGACCT GCCGGGCCATTACCTGAACTGGTTCGCGCGCGAGGGTTTTCCGCCGGGGCAGATCGGGCGGTTGCTGGCGCTGATGCAGG AGCTGGACCACAACGGCCTGAAAGGCCTGCTCGACCCCCTGCGGCAACGCGGGTGA
Upstream 100 bases:
>100_bases TTGATGACCCGGCCGAACGTGCTCCAGTCCACAGCCACTCACGCTGCCAATTCCGCCTTGGCGAATCCATCCGCCTTCAG CTCGGCACCCTTGCTTCGCC
Downstream 100 bases:
>100_bases ACCGGCCGCTCAATCACCGTTGACATAACGGAGCAGCCCCGCCGCCAGCGCTTCGAAGACCACGCGACAGCGCAGACTCT CGCGCAGGTCTTCGTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MTPEDLQRLVTTPMPFGKYKGRLIADLPGHYLNWFAREGFPPGQIGRLLALMQELDHNGLKGLLDPLRQRG
Sequences:
>Translated_71_residues MTPEDLQRLVTTPMPFGKYKGRLIADLPGHYLNWFAREGFPPGQIGRLLALMQELDHNGLKGLLDPLRQRG >Mature_70_residues TPEDLQRLVTTPMPFGKYKGRLIADLPGHYLNWFAREGFPPGQIGRLLALMQELDHNGLKGLLDPLRQRG
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=70, Percent_Identity=45.7142857142857, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8057; Mature: 7925
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEDLQRLVTTPMPFGKYKGRLIADLPGHYLNWFAREGFPPGQIGRLLALMQELDHNGL CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH KGLLDPLRQRG HHHHHHHHHCC >Mature Secondary Structure TPEDLQRLVTTPMPFGKYKGRLIADLPGHYLNWFAREGFPPGQIGRLLALMQELDHNGL CHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH KGLLDPLRQRG HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA