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The map label for this gene is parB2 [H]

Identifier: 17548042

GI number: 17548042

Start: 3587455

End: 3588366

Strand: Reverse

Name: parB2 [H]

Synonym: RSc3325

Alternate gene names: 17548042

Gene position: 3588366-3587455 (Counterclockwise)

Preceding gene: 17548043

Following gene: 17548041

Centisome position: 96.55

GC content: 66.67

Gene sequence:

>912_bases
ATGAGCACGTTGAAGAAGAAGGGACTGGGCCGCGGCCTCGAGGCGCTGCTGGGCAGTCCCGCCGAGATTGTCGAGGTGGC
CAGGCAGGACGGCGCGCCGACGGTGCTGAAGCTCGAGCAGATGCAGCCCGGCAAGTACCAGCCGCGCACGCGCATGGACG
AGGGCGCGCTGCAGGAGCTGGCCGCCAGCATCCGTGCGCAGGGGCTGATGCAGCCGATCCTGGTACGCAAGGTGGACTCG
GACGGCGCCGCGCAGAAGTACGAGATCATCGCCGGCGAGCGCCGCTTCCGGGCGTCGCGCCTGGCCGGCCTGACCGAAGT
GCCGGTGCTGGTGAAGGACGTGCCGGACGAGGCCGCCGCCGCCATGGCGCTGATCGAGAATATTCAGCGGGAAGACCTGA
ACCCGCTGGAAGAGGCGCAGGGCATTGCTCGCCTGATTCGTGAATTCCAGTTCACGCACGAGCAGGCCGCCGAATCGCTC
GGCCGTTCGCGCAGCGCGGTGTCGAACCTGCTGCGGCTGCTGAACCTGGCCCAGCCGGTGCAGACCATGCTGATGGCCGG
CGATCTCGACATGGGCCATGCGCGCACGCTGCTTGCGGTCGATGGTGCCTCACAGATCACATTGGCTAACCAGATCATCA
ACAAGCGTCTGTCGGTGCGCGAGACGGAGAAGCTGGTCGCCTCGACGCTCAAGCCGTTCGAGCTGAAATCGCAGCGGCAG
AAGAACGGCCAGAACGGACGCGATGTTGCCCGGCTGGAAGAAGAACTGGCCGACATGCTGGGGTTGCCCGTGCAGATCAA
GCTTGCCGCCAAGGGGCGCGGTCAGTTGACGGTGCAGTTCGGCAGCCTCGACGAGTTCGACGGGTTGCTGGCCCGTCTGC
GTCCGGACGGGGCCGACGAAGCTGTCGCCTGA

Upstream 100 bases:

>100_bases
GCGCCAAGGCGTACCTGGATTTCGGCGCGGAGATGATCGCGCGCGTGCGCCAGATGGCCGACCAACCGGCCTGAGGCCGG
GCATCGCGAGGGGAACACGG

Downstream 100 bases:

>100_bases
CGTCGGCTGCCTTGGTGTATCGCGCCTGCAACAGCTTGTCGCGGGTTCGGCAATGCCCGTCGCGGCGCCATTTGCGGGCG
TCGGGGTGCGCCGGATGCGT

Product: chromosome partitioning protein PARB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSTLKKKGLGRGLEALLGSPAEIVEVARQDGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVDS
DGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDVPDEAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESL
GRSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFELKSQRQ
KNGQNGRDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARLRPDGADEAVA

Sequences:

>Translated_303_residues
MSTLKKKGLGRGLEALLGSPAEIVEVARQDGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVDS
DGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDVPDEAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESL
GRSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFELKSQRQ
KNGQNGRDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARLRPDGADEAVA
>Mature_302_residues
STLKKKGLGRGLEALLGSPAEIVEVARQDGAPTVLKLEQMQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRKVDSD
GAAQKYEIIAGERRFRASRLAGLTEVPVLVKDVPDEAAAAMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLG
RSRSAVSNLLRLLNLAQPVQTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFELKSQRQK
NGQNGRDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARLRPDGADEAVA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33000; Mature: 32868

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKKKGLGRGLEALLGSPAEIVEVARQDGAPTVLKLEQMQPGKYQPRTRMDEGALQEL
CCCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRKVDSDGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDVPDEAAA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCHHHHH
AMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLLNLAQPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFELKSQRQ
HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KNGQNGRDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARLRPDGADE
HCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCC
AVA
CCC
>Mature Secondary Structure 
STLKKKGLGRGLEALLGSPAEIVEVARQDGAPTVLKLEQMQPGKYQPRTRMDEGALQEL
CCHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AASIRAQGLMQPILVRKVDSDGAAQKYEIIAGERRFRASRLAGLTEVPVLVKDVPDEAAA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCHHHHH
AMALIENIQREDLNPLEEAQGIARLIREFQFTHEQAAESLGRSRSAVSNLLRLLNLAQPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARTLLAVDGASQITLANQIINKRLSVRETEKLVASTLKPFELKSQRQ
HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KNGQNGRDVARLEEELADMLGLPVQIKLAAKGRGQLTVQFGSLDEFDGLLARLRPDGADE
HCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCCC
AVA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]