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The map label for this gene is 17547995

Identifier: 17547995

GI number: 17547995

Start: 3528939

End: 3529271

Strand: Reverse

Name: 17547995

Synonym: RSc3278

Alternate gene names: NA

Gene position: 3529271-3528939 (Counterclockwise)

Preceding gene: 17547996

Following gene: 17547991

Centisome position: 94.96

GC content: 70.57

Gene sequence:

>333_bases
ATGAACGCACCTACCGGCACTAACGTGCAGCTGATCCACGGCCCCGACGGCGCGCCGGCCTTCGTCGTGATTCCGTATGC
GGAATACATCGCCGGCCGCATGCAAGACCGCAGCCTGATCCCCCACGCCGTCATCGAGCGTACGGTGGAGGGCGCCACAC
CCGTGCGCGCCTGGCGCGAACACCTGGGGCTGACGCAGGCCGAGGTCGCCGGGCGCCTCGGCATCTCGCAGCCGGCCTAC
GCGCAGCAGGAAAGCAGCGACCGGCTGCGCAAGGCCTCGCGCGACAGGATCGCCGCCGCGCTGGGGATCCTGCCCGCGCA
GCTCGACTTCTGA

Upstream 100 bases:

>100_bases
CACCGGTATGGCTACCGGCTGCGGGTGGGCGACTACCGTGTCCTCTCCGATTGGGACGACGGGATTCGTATCGTAGACAT
CCAGGAAGTGAGCAAGCGCG

Downstream 100 bases:

>100_bases
GCCGTCGGCATGGCGGCCCGGCGCGGGCACGGCTGGGCCATCAGTCCGGGATGACCACGCGCCCCTGCGTCAGGTCCCGC
AGCGTCGTGCGCGCGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Family; Helix-Turn-Helix Domain Protein; Transcription Regulator Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNAPTGTNVQLIHGPDGAPAFVVIPYAEYIAGRMQDRSLIPHAVIERTVEGATPVRAWREHLGLTQAEVAGRLGISQPAY
AQQESSDRLRKASRDRIAAALGILPAQLDF

Sequences:

>Translated_110_residues
MNAPTGTNVQLIHGPDGAPAFVVIPYAEYIAGRMQDRSLIPHAVIERTVEGATPVRAWREHLGLTQAEVAGRLGISQPAY
AQQESSDRLRKASRDRIAAALGILPAQLDF
>Mature_110_residues
MNAPTGTNVQLIHGPDGAPAFVVIPYAEYIAGRMQDRSLIPHAVIERTVEGATPVRAWREHLGLTQAEVAGRLGISQPAY
AQQESSDRLRKASRDRIAAALGILPAQLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11885; Mature: 11885

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPTGTNVQLIHGPDGAPAFVVIPYAEYIAGRMQDRSLIPHAVIERTVEGATPVRAWRE
CCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
HLGLTQAEVAGRLGISQPAYAQQESSDRLRKASRDRIAAALGILPAQLDF
HHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNAPTGTNVQLIHGPDGAPAFVVIPYAEYIAGRMQDRSLIPHAVIERTVEGATPVRAWRE
CCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
HLGLTQAEVAGRLGISQPAYAQQESSDRLRKASRDRIAAALGILPAQLDF
HHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA