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The map label for this gene is 17547972

Identifier: 17547972

GI number: 17547972

Start: 3510794

End: 3511435

Strand: Reverse

Name: 17547972

Synonym: RSc3255

Alternate gene names: NA

Gene position: 3511435-3510794 (Counterclockwise)

Preceding gene: 17547973

Following gene: 17547971

Centisome position: 94.48

GC content: 69.47

Gene sequence:

>642_bases
ATGTTCCGATCGACCCTCATCCTCGCCCTGGCCTGCGTGGCCGGCATGGCACACGCGGCGGATGCCGCCGTCGCCCCGCC
CAAGCCCGACGCGCGTGCCGATGCCGCGCTCGCCGGGGCGATCCGCGACGGCTTCGTCTCCAGGGGCCCGGCCACGGTGG
AAGGCGTGACCGAGCGCGACGACGTGCAGAAGACCTGCAGCCAGTACGCCGACCGCAGCACCGTGCCCGCCGAGGTGGCC
GCCCGGCTGCAGGACGCCCAGCTCAAGACCATCCGCTACCCGCAGGACGGCAAGTGGCTCGGCGACTGGAAGGCCGGCGA
GCAGATCGCCCAGAGCGGCCGCGGCATGCAGTTCTCCGATCCGGCCGGTACCGTCAACGGCGCCAACTGCTATGCCTGCC
ACCGGCTGTCGAAAGACGAAGTGTCGTACGGCACCATCGGCCCGTCGCTGTATCAGTACGGCAAGCTGCGCGGCGATTCG
GAGGCGATCCTGCGCTACACCTGGGGCAAGATCTACAACTCCAACGCGTACGCGGCGTGCTCCAGCATGCCGCGCTTCGG
GCATAAGGGCATCCTGACCGAGCAGCAGATCCGCGATGTGATGGCGCTGCTGCTCGACCCGGCCTCGCCGGTCAACCAGT
AG

Upstream 100 bases:

>100_bases
TCTACGGCGCCGAGGTGATCACGGCGCTCGAGCTGTTCCTCGCCCGCAACGCCAACGGCGGCAAGATGGACGCGCCGTCG
ATCAAACGATGAGGCCGCGC

Downstream 100 bases:

>100_bases
GGGCGACGATGCGGACGATGCGGCGGATCCGGGGCTGGCTGGCGGCCGCGCTGGTGCCGATGGCGCTGGCGGCCGGCGCC
GCGCACGCCGTGGAGGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MFRSTLILALACVAGMAHAADAAVAPPKPDARADAALAGAIRDGFVSRGPATVEGVTERDDVQKTCSQYADRSTVPAEVA
ARLQDAQLKTIRYPQDGKWLGDWKAGEQIAQSGRGMQFSDPAGTVNGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDS
EAILRYTWGKIYNSNAYAACSSMPRFGHKGILTEQQIRDVMALLLDPASPVNQ

Sequences:

>Translated_213_residues
MFRSTLILALACVAGMAHAADAAVAPPKPDARADAALAGAIRDGFVSRGPATVEGVTERDDVQKTCSQYADRSTVPAEVA
ARLQDAQLKTIRYPQDGKWLGDWKAGEQIAQSGRGMQFSDPAGTVNGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDS
EAILRYTWGKIYNSNAYAACSSMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
>Mature_213_residues
MFRSTLILALACVAGMAHAADAAVAPPKPDARADAALAGAIRDGFVSRGPATVEGVTERDDVQKTCSQYADRSTVPAEVA
ARLQDAQLKTIRYPQDGKWLGDWKAGEQIAQSGRGMQFSDPAGTVNGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDS
EAILRYTWGKIYNSNAYAACSSMPRFGHKGILTEQQIRDVMALLLDPASPVNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22858; Mature: 22858

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSTLILALACVAGMAHAADAAVAPPKPDARADAALAGAIRDGFVSRGPATVEGVTERD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DVQKTCSQYADRSTVPAEVAARLQDAQLKTIRYPQDGKWLGDWKAGEQIAQSGRGMQFSD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCEECC
PAGTVNGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDSEAILRYTWGKIYNSNAYAAC
CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
SSMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFRSTLILALACVAGMAHAADAAVAPPKPDARADAALAGAIRDGFVSRGPATVEGVTERD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DVQKTCSQYADRSTVPAEVAARLQDAQLKTIRYPQDGKWLGDWKAGEQIAQSGRGMQFSD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCCCEECC
PAGTVNGANCYACHRLSKDEVSYGTIGPSLYQYGKLRGDSEAILRYTWGKIYNSNAYAAC
CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHH
SSMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]